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LotjaGi3g1v0500500.3

Overview

Field Value
Gene ID LotjaGi3g1v0500500
Transcript ID LotjaGi3g1v0500500.3
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Hydroxyacylglutathione hydrolase; TAIR: AT1G06130.1 glyoxalase 2-4; Swiss-Prot: sp|Q8LDW8|GLO2D_ARATH Probable hydroxyacylglutathione hydrolase 2, chloroplastic; TrEMBL-Plants: tr|I3SKI5|I3SKI5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0500500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:91870153..91875848) extracted from Lotus japonicus Gifu genome v1.2.

GTTCTGTCTACTGTTGTTTGTCTCTCCATGTACCTTGGCTTTCCCGATTTTAATTCCGTGTTAGCATTTGTTTTAGCTGA AAAAGGTGATTGTTGATCATGATTTGGAGATAGGAGTTGATTATTCTTTCTTTTTCAGGCAAGAAGGGGTTATTGCGGGT GGCCAGATGTGAGACAACTTAGCTTTAGAAAAGGTCTTCTATATGGATTTATGCGATTGTTTTCTTTACCGTTAAAAACA TTGCGTGGAGCTAGTCGGTCACTAAGGGTAGATCGATTTTGCAGTGTAGTGTATACTTCTTCCTCATTGCAGATTGAATT GGTGAGCTGATCTCTACTTTTTCTTTTTTAACTTTTCATGATGTAATTAGATTAATATAAGCTTATAATGTTTCTGAAGC AATATGCTGAAATCCTATACCATGTCATCTCATTTATATTTTTTTTTTCAGGTTCCCTGCCTTAGGGACAATTATGCATA TCTCATATATGATGTTAATACGGGAACTGTGGGTGTTGTTGATCCTTCTGAAGCTGCGCCAATCATAGATGTTTTGAGCG AGAAAAATCTGAATTTGACATACATACTGAACACCCACCACCATGATGATCACACAGGTGGAAATGCAGATTTGAAAGAA AGGTACGGGGCAAAGGTATGGCATTTCAATCTCCTGCTACATTTTATTTTACCAGCAATGTTATAAATGTGCTTTCAGCA AAAATCATTCTACTATTATAATATAGTATTGTGTCCGAACTTTGAATCAGAATTCACATTATAAACTATAAAGTGACGTT TACGTTGCTTTATTTGTAACACTTTCCATCTTTTGTTATAGGTAATTGGTTCCGGACTAGACAAGGAAAAAATTCCTGGT ATTGATATCCATTTGAGTGATGGGGATAAGTGGATGTTTGCAGGCCATGAAGTGCATATAATGGCCACACCTGGTCACAC CCAAGGTCACATTTATGGTCTATTTGCACTAGTAAATCCTCGTAGTTGTTGGCCTTTATTGTTAGGTGTACAATGATAAG CCACCAGGATTGGGCTAGTAAAATGTCGGCTCATTTTTTGCTTATTCAGAACTTTGGCTCTTTTAAATGTATTCGACTCC ATAGAAATCTAAGCTCTGTTTTCTTAACAGCTGGTCTATTGTTCAAGTCACTTAAGTTTTTTTCGGAAAAGCAAGTCACT TAAGTTATCTGTCCCTCACAGAAATCTAAGCTCTGTTTTCTTTGCCATTTTATTGACTGAACAGCTGGTCTATTGCTCAA GTCACTTAAGTTATTTGTCCCTCACAGAACCCCAGTCTTGATCTTCCTTTTGTGTTGTTAAACTTAATGATTTATTTTGT CAATACAAAGATTTCAGACTGTTCCATGATCCATCTATGACGTTTGGGTTATTGCCTTGGATTGTTCACTTGTGTTAGGT TATACAACTCTTCAATTAACATGCAAATGTTCTAATTTGAGACTTTGAGTATGTGTTTGTTTGCACTACGAGCAGGCCAC ATAAGCTTCTATTTTCCTGGATCTGAGGCAATTTTTACTGGAGACACCTTGTTCAGCTTATCATGTGGCAAGCTGCTTGA AGGAACTCCGGAACAGGTTGATTTGAATTGTGCATTCAGTTTTTCATTTAGTTTTCAATAAGTGGATTTCTATCTTCTGT GATAAGTCATTGATTCTGCAATATTTCTTTCATGTTTTGTTTGAGTTGTTTTATCCCTTTTCAAGAGTCCTTAAATCACA TAAATATCTGCATAAAAGGACTTGAACCATGGTTGTTTCAATTGCAAATAACTGAGGACTTTATGATATTTGAAACTTGT ATACTTCTCATCAATTCATAACTTGAGTGTATAAATGACTGTATTATTCGACTTATTTCTGGAAAGCCTTTTTATGATAC TGATTGGTCTTTTATTTGGGTGTGAATTGTATAAAAACTTTCAATTCAATGGTTAGATTTATTAAATTTTCATTAAGAAA GTTATTAAGTGGTGTAATTTACTAATTTTACAAGTTTGACGCTTGATGTCAGTTAATCATATTCCTCGCGCGCATGCACA CATTCAGAAGGGGGGGGGGGGGACGCTGATGAAACCCTGATATTATTCAACAGAAAAATGTACAAGAAACAGATGTGTAT TCGAGAGACTCATCACTCTCCTAATTCCCAATTCCCAAATGATCCCAAAGATACCTAAACCCTCTTCACACTCCCTTATT TATAGGCTAAGCCATAACTAACTAACTAACTCTAAATGCTAACCCTTAACTAACTAACTAACTCCAAGTACTCATCAATA CTCCCCCCTAAACATCCACCTTGTCCTCAAGGTGGGGTAAAACACAAGCTTCTTTAAACAAACAAAAAACAAATACTCCA ACAGTTGGGCCTGGCCCATTAGAGTAAGGGAATGAACTGGTCTGTAGATGATTGAGAAAGAAAAGTTCCTCTTGGGCCCG TTCCTTCTGTTTAGCATTATGGGCTTTGGCCTTGTGGTCAAACTTTGACCCAATTCTGAAAAATCTAGCTGAGCCAGCCT TGCTCTGCTTCGTGTGAACGCGTGTGCGTGTGAAGACAACGGAAAGACCACACCCAACCAGCGACGACGGAAACGAACGT CCCCCGCCATAACTGCAAAGTCCGGTGGCTTCGCCGGCGGCCGTGAAACGGTTACCGACTTGCGAATGAGCGAGCGCCCT TTACTCTCCTCCGTGCGAACTAACTCGAGGCCACAGTATCCCACCACCACTGTCTCAGCCAAATCCGGTGACATAGCTGG AGGACGGTTGGCCACCAAGTCCGATCTGCAAGAATCGCCAAGGATGAAGTGTGAGCTGCCACCACTGCGGTCTGGTGGCT TAGTCTCCAGTTGAATGGCAACCATCGAAGAGCAAAGAACAGAGGTCTGAATGAAGACCTCCGTCCAGCAAAAGAACGTG TCCGGCAGTCGATTGGCGGTTACCGCCGTGCAGAGACATGAATCCGGCGGTTTCCGCGGCGGCCGTCTCTCCCAATCGAA TCCTAAATCACTGATTTGGGGCAAAACGATTGGTTGCACCTTCTTCCTCCCATGAATGCTGCAAATCTGCCATTTCTCCA TTGAAGAACCTTCCTGTAACCGCTTGATTTTGATTTCCCCTTCGGCGTCGATCTTCTCCCCTTTCGCCGTCAACGTGCAA TCGATGTAATCAACCACGGTGACCGGTTGACACCGTGACACCTCCGCTGTTTGCTCCGCCGCCATTGCAAACTCTGAGTC TTTCCGCGACGCTTCCATCTCAGAATTCTCCGGCGAATATGGCTTGATCTCTGATTTCGCCAACAGCACTGAATTGGCCT CAGGTTTGGCTTCCACCACAACAGTTCTTCGTTCTGCCTCCAAGACTTCTTGCTTCCCAGGGATTTCTTCCTCCTCTGAA TCTTGGACTGGTTCTGGCATGTACGGTTCCAATTCTGGTTCGAATTTCCTCAACAGAGCCTCCACAAATTCCCACCATGT TGCCTTCTGATTGCGTCTTCTCCAGCAAAACCACCACATGAAAGCTTCACCAGTCAAAGCCTTCTCTGCCCCTGAGAATT TCTCCTCTTCGGATACTCCCTTGGCCTCACAGTGTTGCTCCACCATAATGAGCCATCCGTAGGCCTCTCTTCCATCAAAT TCTGGAAACATCTTCACGAATTGATGGCAATCACAGCACCTAGATCGGTGCTCTGATACCAATTGATGAAACCCTGATAT TATTCAACAGAAAAATGTACAAGAAACAGATGTGTATTCGAGAGACTCATCACTCTCCTAATTCCCAATTCCCAAATGAT CCCAAAGATACCTAAACCCTCTTCACACTCCCTTATTTATAGGCAAAGCCATAACTAACTAACTAACTCTAAATGCTAAC CCTTAACTAACTAACTAACTCCAAGTACTCATCAGACGCACGTCAAACGCTTACACTTACCGGACACTCAAATAAGGCTT ACCAGTTACCACTTAAAGAATACTGACCAAAAAATATTTTATATTTAAATAACTTTAGAGAAGGACAACTTAAGATATAC AAAAAGTTAAAACTTGAGAAAATATTAGAAATCTCTATAGCGCATTTGATTTGGTAATGTTGCTTGTTCCTCTATTCATC CTTGTACCTAAAAAATGTGAGTGTGTGTAATAGGATCATTTGACACCAAACGCCAAACTTGTACAATTATACCACTTAAT TTTTTTCACAATGTGAAACTATCCTATCCAATCGTTAATTGATATGTTTTATAGAGTATGGTAAGTCTACAATACTTAAC ACAAATAAAAAAAAAAACTAATCTGTACTTCATCATACCACTATAATGTGTTATTTAAAATGTAAGTAAATTTCCATTCT TAGATTTAAAACCTTCAAATGATCAAATTATATGAAATCTGCTATACTTGATCAATCAAAATAGTACAACAAGTTTCAAT GGTTGGACTGGTTATTTTCACATGGTCCAAAATTTTATTAAGTTGTCTAATTGTACAAATTCGACCCTTGATATGTCCAA TATGTGTTGTAAGTGTCATACCAATGTTCATGTCAGATGTGTTTGTCACTGACAATCAAGAAAAGAGTATCCATGCTTTG TAATAATTTCTTACTTATTACTGTGTTAGTATCAGAAATCACTGTATCTTTTAATATTATTTGTGATTATAAAAATATTT TCCATGTGGTGAACTCTAATATATGTTGATGAGGATGTATAATTTGAATATTAGATGTTGATTTCTCAATTTGTACTTGC TGATGTACAATGGTCATAAACACGGGCCATATCTGGTGTCTAGTCAGTTACTTGATATGCTTGTATGTATTTTATCTTCA TTTATTAATAAATTTTTTCATGACACAGATGCTATCTTCTCTTGAAAAGATAATGCTGTTACCAGACAATACGAGTATAT ACTGTGGTCACGAATATACATTGGTTAGTTATTTCTAGTTTCATCCTTTTATGTTCCCTGCTTTATTTTCTAAGCCTTTT GTTGTAACGTTGACTTTGGTGGTTTGAAATTGGGCAGAGTGATTCAAAGTTTGCATTGTCTATAGAACCTGGAAACAAAG AACTTAAATCCTATGCTGCCCATATAGCTCACCTTACGAGTAGGGGCTTTCCCACGGTAATTTTCAGAACTGGTGTTTTT TTAATGGATGGTTTGCATGGAATTGACTCTTTAGAAGCAAGAGTGTCACTTTAAAGAGTAAAGTAAATCACCACAACTGT TGATTGAGAAATATATTCTTGAGATTTTGAGATCACCATAATTTCTTACACGCTAGTCAGTACATGATGTCGATTCATCG CTCAACAGTTGTGATAATTTACTTTACTCTGGACTCTCTTACTTTAGATGAGGCAAATCCGGATTGCGGTGCACTTTCTT CACCAATGGGTCACTAGTACTCACTGTTATTAGGCTTTCGTACCCGCATTAGATCTTGGTCTCTTGGAATGTTGAGTTTT GTGCTTACCAAATTAGTGCTGTTTCCCAGATTCCATCTACGCTGAAGATGGAAAAGGCTTGCAATCCATTCCTCCGCACA AGCAGCTCAGAGATCCGACAAAAATTAAATATAGCTGTCACGGCAGATAATGCAGAAGCCTTGAGTGTTATCCGGCAAGC AAAGGATAAATTTTAG
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0500500.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCGATTGTTTTCTTTACCGTTAAAAACATTGCGTGGAGCTAGTCGGTCACTAAGGGTAGATCGATTTTGCAGTGTAGT GTATACTTCTTCCTCATTGCAGATTGAATTGGTTCCCTGCCTTAGGGACAATTATGCATATCTCATATATGATGTTAATA CGGGAACTGTGGGTGTTGTTGATCCTTCTGAAGCTGCGCCAATCATAGATGTTTTGAGCGAGAAAAATCTGAATTTGACA TACATACTGAACACCCACCACCATGATGATCACACAGGTGGAAATGCAGATTTGAAAGAAAGGTACGGGGCAAAGGTAAT TGGTTCCGGACTAGACAAGGAAAAAATTCCTGGTATTGATATCCATTTGAGTGATGGGGATAAGTGGATGTTTGCAGGCC ATGAAGTGCATATAATGGCCACACCTGGTCACACCCAAGGCCACATAAGCTTCTATTTTCCTGGATCTGAGGCAATTTTT ACTGGAGACACCTTGTTCAGCTTATCATGTGGCAAGCTGCTTGAAGGAACTCCGGAACAGATGCTATCTTCTCTTGAAAA GATAATGCTGTTACCAGACAATACGAGTATATACTGTGGTCACGAATATACATTGAGTGATTCAAAGTTTGCATTGTCTA TAGAACCTGGAAACAAAGAACTTAAATCCTATGCTGCCCATATAGCTCACCTTACGAGTAGGGGCTTTCCCACGATTCCA TCTACGCTGAAGATGGAAAAGGCTTGCAATCCATTCCTCCGCACAAGCAGCTCAGAGATCCGACAAAAATTAAATATAGC TGTCACGGCAGATAATGCAGAAGCCTTGAGTGTTATCCGGCAAGCAAAGGATAAATTTTAG
Download CDS Sequence

Protein sequence (LotjaGi3g1v0500500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MRLFSLPLKTLRGASRSLRVDRFCSVVYTSSSLQIELVPCLRDNYAYLIYDVNTGTVGVVDPSEAAPIIDVLSEKNLNLT YILNTHHHDDHTGGNADLKERYGAKVIGSGLDKEKIPGIDIHLSDGDKWMFAGHEVHIMATPGHTQGHISFYFPGSEAIF TGDTLFSLSCGKLLEGTPEQMLSSLEKIMLLPDNTSIYCGHEYTLSDSKFALSIEPGNKELKSYAAHIAHLTSRGFPTIP STLKMEKACNPFLRTSSSEIRQKLNIAVTADNAEALSVIRQAKDKF
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11935:SF143
1 286 286 5.5E-166 –
PANTHER
PTHR11935
1 286 286 5.5E-166 –
PIRSF
PIRSF005457
28 286 259 1.5E-116
IPR017782
SUPERFAMILY
SSF56281
33 285 253 7.0E-66
IPR036866
Hamap
MF_01374
33 286 254 41.052
IPR017782
Gene3D
G3DSA:3.60.15.10
33 286 254 4.0E-101
IPR036866
TIGRFAM
TIGR03413
36 286 251 2.7E-90
IPR017782
CDD
cd07723
38 201 164 2.58377E-92
IPR035680
SMART
SM00849
43 201 159 9.5E-36
IPR001279
Pfam
PF00753
45 201 157 6.4E-17
IPR001279
ProSitePatterns
PS00743
83 103 21 -
IPR001018
Pfam
PF16123
202 286 85 2.6E-22
IPR032282

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004416
Molecular function Hydroxyacylglutathione hydrolase activity Catalysis of the reaction: (S)-(2-hydroxyacyl)glutathione + H2O = glutathione + a 2-hydroxy carboxylate.
Subterm of
GO:0008270
Molecular function Zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
Subterm of
GO:0008800
Molecular function Beta-lactamase activity Catalysis of the reaction: a beta-lactam + H2O = a substituted beta-amino acid.
Subterm of
GO:0017001
Biological process Antibiotic catabolic process The chemical reactions and pathways resulting in the breakdown of antibiotic, a substance produced by or derived from certain fungi, bacteria, and other organisms, that can destroy or inhibit the growth of other microorganisms.
Subterm of
GO:0019243
Biological process Methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione The chemical reactions and pathways resulting in the breakdown of methylglyoxal, CH3-CO-CHO, into D-lactate via the intermediate S-lactoyl-glutathione. Glutathione is used in the first step of the pathway and then regenerated in the second step.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0500500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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