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LotjaGi3g1v0501000.1

Overview

Field Value
Gene ID LotjaGi3g1v0501000
Transcript ID LotjaGi3g1v0501000.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Plant regulator RWP-RK family protein; TAIR: AT2G43500.1 Plant regulator RWP-RK family protein; Swiss-Prot: sp|O22864|NLP8_ARATH Protein NLP8; TrEMBL-Plants: tr|I1LQB5|I1LQB5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0501000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:91958145..91964686) extracted from Lotus japonicus Gifu genome v1.2.

TTTTTTATTCAAACATCCTTGTCTTAGTCATGAGATTCCATTTGAATCTAGGTGGTTTGGTGGTTCCATGACAATAAATT TATACAAATCCAAGTGCAGCCTCTAGTTTGATTTAATTTAAATATTCCCAAAATCATTACTATATTAGTACTAATTTTAT TATAATTATTGTGTCCATACACCAGAGAGGATGATTAAACAACAAGCACTAGAGCCTTGTTGTGGAGGCTGTGTGTGTGG CGAGTCGACCATGGTGATGACTGGTTTCTATTTTTAGCTACCATTTTTCTGTAAATCACCCAGTTTCATCTCTGTTATCT TTCCTTTTATAGAAACCACCTCTTCCTTTGTTACTGTTTGCTAACAATTTTTGACTTCACAGTTAAAAAACCTGTTGCTG TTGTTGTTGTTGACTTGTTGTGTTGTTGTAGTTCACTGCACCACACAGAATCTTTCCCTCTTGTTTGGAGTTTGAGGATT CCGAGGTCGGTGCCTCGTAGGTTGTGTGGTCTGCGTGGAAAGAGAATTCTTAGGGTTTTGTGTAAAGTTTTGATTTTGAC TGTCAAGTTTCAAGCTTTTGGAGATTGGAGAGCGGTTTGGGCAACTGGGTCTTTCTCATTTGCCTCAATTTGTTACATTG TTTCACTGACTGGGCATGCCATGGTTCTTCTATGGAGGTTGGGTTCAAGCATTCAGGTATTTAGGGAAACCTAATTTTGT TTTACTTTTTTTATTTTATTTAAATCTGTTGGTTTGTTGTTTGTTTTACTTGGTATGATGTTTTAAACTTCTGTTGAGCT GAATTGTTGCAACACTTGTGCCTGTTTGAAGATTAAAATTGATTTTAGGCTTTAATTAGTAGCTTTGGGTTGGGGATAGT TGTTGGTTTCTCAGGAGTTGGTTTGGGGGTTTTCATTTTTAGGATGTGATGGCTTCTCTGCTCATTTTTACTTTCATGAA GACTTTAAAATTGGAAAATTGAAAAGTTGAAAAGAGATGGGAGTTGAACTAGTAATTCTTCAATTCTGAATCCTGATATT CATAAGTTTCGAAGACAGAATTTTAACTGAGATTATTGGTTTTTCAATGGTGAGGATGGTTAAAAGTGAGTTAAGGAAGT GAATTTTAGGTTGACGTGTACAAGGATTTAAAATCAGCTCAGCATAGTACTCAGTGAGTTGGCATATTCAAAATATACAT CCTATAATTCAATTTGTTTCCCTGTAGAACTTTCTCATGCTATTTTCCTCTAGGGAGGAGCAATTTTAAAGTTCCTATTT TGCTTGAGGGGTTGAGATCAGGGTTTTAAATTGAGGTTGAGGAAGCGTTGCAGAATTGCAGACAAATTCTGGTTGATGAG GTCCCGTTGCGGAGACTCCAAAACCTTTTACGTTGCGGTTGCGGACCACAATTTAAAACCTTGGTTGAGATTATTATTTT TCTTTCTGTAATCCAAATAATTTTAATTGAGTTTTGATGAATTTTCTGTCATCTGCTGAGAATGTTCAGACAGTGTTAAA CCTTTGCAGGCCTACATAAACTGGAAAGGAATGTCTTGTGCAAATTCATGTTCGAAGGGATAACATTGGTTGAATTTCAA TTTCAAAATTTCTCTGCAACCTTATAATGGAAGACCACCTTTCCCCTAAGGGAAAAGGAATTGGTTATTCGGCATCGTTC GATGGTGGAATGAAAAATTCAGCTTCGGAGGACATGTTTAACAACATCTCCGAGCTCATGAACTTCGATACTTATGCTGG TTGGTGCAATAGCCCATCCATGACTGATCCGAATTTGGCTAACGGTCTTACGCCATTTGTTTCGGTACCATACCCACCAC CTGATGGATTGAATTTAGTGGAGCAGAGCAGTGGTCCCTTCTTTATGACAGAAGCCACTGGAAATTACAATGATATGCAA AGCTCGCCCAGTTATGGCGACAGAGTTGTATTACAGCAAATGGAAAACCAATTTGAGTTCTTTGATGTTCTAAATGATAC AAATAACTTAGATGCTAAACAAAAACAAAGTGTCCCATTTCAGCAACTTAATACCTCAGATATGGGCAATCATATAATGT CCTGGTCATCTAGTTGGTCACTTGATGAGAGAATGCTGAAGGCTTTGTCCTTCTTTAAGGAATCAGCTGGTGGGGGAATA TTGGCACAAGTCTGGGTACCCGTAAAGCATGGTGATGAATTCATCTTAAGCACAAGTGAGCAACCCTATTTGCTAGATCA TAAGCTTGCAGGGTATCGTGAAGTGTCAAGGACGTTTACATTTTCTGCAGAAGGAAAAGCAGGCTCTTGTCCTGGGCTTC CTGGTCGCGTGTTCACCTCCCATGTTCCTGAATGGACATCCAATGTTGGTTACTACAATAAAACTGAGTACTCGCGGTTG GAGCATGCGATTAATCATGAGGTTCGGGGATCAATTGCTCTTCCTATATCCGATCCGGACTCTAAAGTGCCATGTAGTGC TGTCCTTGAACTTGTCACTACAAAGGAAAAGTCTAATTTTGACAGAGAATTGGAAATCGTTTCTCAGGCGCTCCAGGTTG GGTTTCCTTTAGCCACTTCCAACATATACTTCAATTTCTTGCATTTACCTGTCTTAGTGCTGCTTATTTCAAGTTTGTTG GCATATCTGTGTTACTCTATTTGAGACTCAGTTGTCATCTTGTGTCTCCATTTGATGTCTTGTTACAAGGTTGTCATGGA GAAATTTCTATCTTGGATGACAAAGTATCTTATCAATGTATTTGATGTTGATCTCAGTGTAGTTGAGGAGTAGTTATGCA AGCAGAAGATTTTGTGCATGGTGTAGTCATATTTCTTGTGATCAAACTAGGGTACTTTCCACAAATTGGAACAATAAGAA TGGCATATACTGATCTGTTTCTAGTCAATAGTCATTCTGTATAGGCCCATTCTATACTCAATAGGATACAGTTATTTCAA AGGGCATCTTTATTCTTCAATTTATTTGATTCAAGAACCTCTTGATTTGCATTATAATGTTTCAAAGACTAAATGCGTCT CAGTCAGTTATGGCTTTACTCTCCAATTACATATAAAAGTAACCTTTCTGTGTTATAGATATTTCCAGATTGTGTTATAA TTAAAGTTAGTAATGATAAATGTATTATCATGATTTTCTGCAGCATGTACATTTAAGGACTATTACGCCGCCACGACTTC TTCCTCAGGTACTTGCTGAATCCTGAATTTGCATTCTTCCTATTGATTTTCCTGATATTTGTTTCTATCTGGATTTCGGA ACTTCTTACTAGGTTGATTCTTTTTCTGCAGTCTCTATCAAATAACAAAAGAGCTGCTTTATCTGAGATAATTGATGTGT TACGAGCTGTATGTCATGCCCATAGATTGCCACTGGCACTTACATGGATTCCCTGTTGTTACAGTGAGGGAATAGGAGAT GAAACCGAGAGAATCCGAATTAAAGAAGGCCATATAAGTTCTAATGAAAAATGTGTTCTATGTATTGAAGAATCAGCTTG CTATATAAATGATAAAATGGTAGGAGGATTTGTTCATGCATGCACTGAACATCATCTCGAGGAAGGGCAAGGTATAGCTG GGAAAGCTCTTCAATCAAATCATCCATTCTTCTATCCCGATGTCAAGTCTTATGATATCAGTGAATATCCCCTTGTTCAT CATGCACGCAAATATAATTTGAATGCGGCAGTTGCAATTAGGCTAAGGAGTACATATACTAATGATGATGATTACATATT AGAATTCTTTCTGCCTGTCAATATGACAGGGAGTTTAGAACAGCAACTTCTATTAGACAATCTCTCAGGTACTATGCAGA GAATTTGTAAGAGTTTGAGGACCGTTTCAGATGCTGAATTAACAGGGATAGAAAGCTCCCAAGTTGGGTTTCAAAAGGAA AAAGTCCAAGGTATTTTTCCTATATCCGGTAGAAACTCTCAGACGGCATCAATAGGTTGTGACTATGATTTGGACCGGAA GATGTACTTGAAGGCAACTAACCTGAGAAATAATGGAATCGAAGCTGCTAGAAGCCAGGTATATCTTGACTGTATCTTCT TCTTACCCTCATCTAATTTTATGATATGATTGCTTCATTTGAGGAAGCAGTTCTTGCAAGTTATTATGCATCCTGGAATG GAACCTGTGGGGGAAATTACCGAATATCCATCACACTTCATTTATGTTATAAAGGAGCGAACCCGTGGAGTGAAACATCT GATATAATTTGCTCTTCAACTTTGTAACTTCTTGGTTTAGTTTTTTTTAATGTCTTTTGGCACTATAGTTTAACATCATA GTAAATTTATTTTTCAGGCAATTAATGGATCAAGAAAGCAGGTTGAGAAAAAGAGAAGTACAGTGGAGAAGAATGTTAGC TTGAGTGTTCTCCAACAATACTTTTCTGGCAGTCTGAAGGATGCTGCGAAAAGCATTGGTGGTGAGCTTCCACATTATTT TTCCAAATTTCTTTATATTTATTAACAAATGATTATTTTGGGTTATATGATGGATGTTTCATTGAAGATATTAAATATTT TTGAAAGGTCATTCTTGTTAATGAAGACAAATTCATCTCATTAACTAACATTTCATACTGGAACAGTTTGCCCAACAACT CTTAAGAGGATATGCAGGCAACATGGAATTTCAAGATGGCCGTCCCGCAAGATTAATAAAGTGAATCGTTCATTAAAGAA AATACAGATTGTGCTTGACTCTGTCCAAGGAATGGAAGGAGGGCTGAAGTTCGATCCTTGTACTGGGGGTTTTGTAGCAG GAGGATCAATCATCCAAGACATTAGTGCACATAAAAGTATTCTGTTCCCTGAGAGAAGTGCTGTGAAAGACACTGAGCCT GTAGTACGAGAAGTGGTCTCAGGAGTACCTCTAGCACCTGGTAGCCCAGGTGAGAACTCAGCCATTGAGTTGGAGGATGA TGGTGTTTGTTCGGTTGGGAACCAGCTTGTGCACTCAACAAGTGTACTTATGTCTAATTCCTATGAGGGCGAGTTGAAGA TAGACAATGCTTCTTCTGCTGATGGTAGTGAAGATTCAAAATCAATGGCTGTGGATGATGTGACCAAGGCTCAGGACTGT CCTGAACAAAACTCTCTAGGTTCTGTTCTTGAAAAAGAGGGGGACCAATGGAGTTTGAACAAGTACGGTATGGGAGTAGA AAATTCCATCCATGATATTGTTTGTAATACTAATAGTTCAATCTCCTTGATTGAACTTAGCGGCGATGGAGGAAATGGTG CTGATGAACATAACCACCCCACTTCTTCAAGCATGACAGACTCTTCCAATGGCTCTGGCTCAATGACGCTTGGCTGTTCA TCAGGCTCCCAGAGCTTTGAGAATCAGAAGAAATCGAAAGCCAAATCAGCTTGTGTTGTTGATAGTGGGTCAAAAATGGT TGTCAAAGCTACCTATAGAGGAGACACTATCCGCTTCAAGTTTGATCCATCTGCAGGTTGTTTCCAGCTATATGAAGAAG TTGCAACAAGGTTCAAATTACAAAACGGGTCATTCCAGCTTCGATATCTAGATGATGAAGAGGAATGGGTGATGATGGTG AATGACTCAGATTTGCAAGAATGTGTAGAAATTTTGGGTGATATTGGTGCAACTTGTGTGAAGTTTCTTGTTCGCGACAC GACCGGTGTTTTAAGGAGCCGTAGCAGTAATAGTTGCTTCTTGTCAGAGAGCTCATAGTAGATATCAGTATATGAGATGA TGCATGGCTTCAATGCAACAGTTGAAGAGTTTCAACAATGTTTTGTTACTTATACATTCGCGTGTGGGTTCTGCGTCACT CTGGATTCTAAAACCATGCTGGTTGGAGGAGGTGCCTTTTAGCCTACCTATACCAGATGCAAAACATCATTTCTATTGAA GATCTTGCAGGTGTTGTGTGGGGCCATTGAGTCAAATGTTGCTTGTAGTTCAATCTTCAAATAATAGAAGTTAAAGTATG GTCATGCTTCAAATAGGAGGTAGAATAGATAGTAGTAATAGCCTGTTAAATATATAGTTCTGTATATGGTAGATTAAAGC AGCATAGAAGCATATAGTTGCACAAAGGACTGGCCCAAATAGCTCTGGGTGCTTTAATCTCAGTTTGTATAGATTTCCCA TCAGAAAATATGATCAAGTGTAAAAATTTCTGTAGAATTGAGTCCTTGGTTCTTTTTCCTTACAAAATAGTAGATAGTTA GAAACATGTACTGTGGAATTATAAGTTTCTCAAAAGGAAGATGTGATGTAATTGGATAGATGAGTTTCAGCAACCATGGT TCTGTGTTTTCTAATGACCATGTTATGATAATGGTAAGGCTTAAAACAGTTAAATCAATTGTGTTTTGCAAATAATACTT AAGGCCTCATTTGGAAGAACTTATTTGTGTTTATGCAAGTATTTGCGAAAACTTATGGAAATAGTTTATGGCTTACCTAT AAGTTGTTTTGTGCTTATCTTCCTGTAAAATGAATGGTGCAGACTCGTTAACCGTTGGATCG 

CDS sequence (LotjaGi3g1v0501000.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAAGACCACCTTTCCCCTAAGGGAAAAGGAATTGGTTATTCGGCATCGTTCGATGGTGGAATGAAAAATTCAGCTTC GGAGGACATGTTTAACAACATCTCCGAGCTCATGAACTTCGATACTTATGCTGGTTGGTGCAATAGCCCATCCATGACTG ATCCGAATTTGGCTAACGGTCTTACGCCATTTGTTTCGGTACCATACCCACCACCTGATGGATTGAATTTAGTGGAGCAG AGCAGTGGTCCCTTCTTTATGACAGAAGCCACTGGAAATTACAATGATATGCAAAGCTCGCCCAGTTATGGCGACAGAGT TGTATTACAGCAAATGGAAAACCAATTTGAGTTCTTTGATGTTCTAAATGATACAAATAACTTAGATGCTAAACAAAAAC AAAGTGTCCCATTTCAGCAACTTAATACCTCAGATATGGGCAATCATATAATGTCCTGGTCATCTAGTTGGTCACTTGAT GAGAGAATGCTGAAGGCTTTGTCCTTCTTTAAGGAATCAGCTGGTGGGGGAATATTGGCACAAGTCTGGGTACCCGTAAA GCATGGTGATGAATTCATCTTAAGCACAAGTGAGCAACCCTATTTGCTAGATCATAAGCTTGCAGGGTATCGTGAAGTGT CAAGGACGTTTACATTTTCTGCAGAAGGAAAAGCAGGCTCTTGTCCTGGGCTTCCTGGTCGCGTGTTCACCTCCCATGTT CCTGAATGGACATCCAATGTTGGTTACTACAATAAAACTGAGTACTCGCGGTTGGAGCATGCGATTAATCATGAGGTTCG GGGATCAATTGCTCTTCCTATATCCGATCCGGACTCTAAAGTGCCATGTAGTGCTGTCCTTGAACTTGTCACTACAAAGG AAAAGTCTAATTTTGACAGAGAATTGGAAATCGTTTCTCAGGCGCTCCAGCATGTACATTTAAGGACTATTACGCCGCCA CGACTTCTTCCTCAGTCTCTATCAAATAACAAAAGAGCTGCTTTATCTGAGATAATTGATGTGTTACGAGCTGTATGTCA TGCCCATAGATTGCCACTGGCACTTACATGGATTCCCTGTTGTTACAGTGAGGGAATAGGAGATGAAACCGAGAGAATCC GAATTAAAGAAGGCCATATAAGTTCTAATGAAAAATGTGTTCTATGTATTGAAGAATCAGCTTGCTATATAAATGATAAA ATGGTAGGAGGATTTGTTCATGCATGCACTGAACATCATCTCGAGGAAGGGCAAGGTATAGCTGGGAAAGCTCTTCAATC AAATCATCCATTCTTCTATCCCGATGTCAAGTCTTATGATATCAGTGAATATCCCCTTGTTCATCATGCACGCAAATATA ATTTGAATGCGGCAGTTGCAATTAGGCTAAGGAGTACATATACTAATGATGATGATTACATATTAGAATTCTTTCTGCCT GTCAATATGACAGGGAGTTTAGAACAGCAACTTCTATTAGACAATCTCTCAGGTACTATGCAGAGAATTTGTAAGAGTTT GAGGACCGTTTCAGATGCTGAATTAACAGGGATAGAAAGCTCCCAAGTTGGGTTTCAAAAGGAAAAAGTCCAAGGTATTT TTCCTATATCCGGTAGAAACTCTCAGACGGCATCAATAGGTTGTGACTATGATTTGGACCGGAAGATGTACTTGAAGGCA ACTAACCTGAGAAATAATGGAATCGAAGCTGCTAGAAGCCAGGCAATTAATGGATCAAGAAAGCAGGTTGAGAAAAAGAG AAGTACAGTGGAGAAGAATGTTAGCTTGAGTGTTCTCCAACAATACTTTTCTGGCAGTCTGAAGGATGCTGCGAAAAGCA TTGGTGTTTGCCCAACAACTCTTAAGAGGATATGCAGGCAACATGGAATTTCAAGATGGCCGTCCCGCAAGATTAATAAA GTGAATCGTTCATTAAAGAAAATACAGATTGTGCTTGACTCTGTCCAAGGAATGGAAGGAGGGCTGAAGTTCGATCCTTG TACTGGGGGTTTTGTAGCAGGAGGATCAATCATCCAAGACATTAGTGCACATAAAAGTATTCTGTTCCCTGAGAGAAGTG CTGTGAAAGACACTGAGCCTGTAGTACGAGAAGTGGTCTCAGGAGTACCTCTAGCACCTGGTAGCCCAGGTGAGAACTCA GCCATTGAGTTGGAGGATGATGGTGTTTGTTCGGTTGGGAACCAGCTTGTGCACTCAACAAGTGTACTTATGTCTAATTC CTATGAGGGCGAGTTGAAGATAGACAATGCTTCTTCTGCTGATGGTAGTGAAGATTCAAAATCAATGGCTGTGGATGATG TGACCAAGGCTCAGGACTGTCCTGAACAAAACTCTCTAGGTTCTGTTCTTGAAAAAGAGGGGGACCAATGGAGTTTGAAC AAGTACGGTATGGGAGTAGAAAATTCCATCCATGATATTGTTTGTAATACTAATAGTTCAATCTCCTTGATTGAACTTAG CGGCGATGGAGGAAATGGTGCTGATGAACATAACCACCCCACTTCTTCAAGCATGACAGACTCTTCCAATGGCTCTGGCT CAATGACGCTTGGCTGTTCATCAGGCTCCCAGAGCTTTGAGAATCAGAAGAAATCGAAAGCCAAATCAGCTTGTGTTGTT GATAGTGGGTCAAAAATGGTTGTCAAAGCTACCTATAGAGGAGACACTATCCGCTTCAAGTTTGATCCATCTGCAGGTTG TTTCCAGCTATATGAAGAAGTTGCAACAAGGTTCAAATTACAAAACGGGTCATTCCAGCTTCGATATCTAGATGATGAAG AGGAATGGGTGATGATGGTGAATGACTCAGATTTGCAAGAATGTGTAGAAATTTTGGGTGATATTGGTGCAACTTGTGTG AAGTTTCTTGTTCGCGACACGACCGGTGTTTTAAGGAGCCGTAGCAGTAATAGTTGCTTCTTGTCAGAGAGCTCATAG 

Protein sequence (LotjaGi3g1v0501000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MEDHLSPKGKGIGYSASFDGGMKNSASEDMFNNISELMNFDTYAGWCNSPSMTDPNLANGLTPFVSVPYPPPDGLNLVEQ SSGPFFMTEATGNYNDMQSSPSYGDRVVLQQMENQFEFFDVLNDTNNLDAKQKQSVPFQQLNTSDMGNHIMSWSSSWSLD ERMLKALSFFKESAGGGILAQVWVPVKHGDEFILSTSEQPYLLDHKLAGYREVSRTFTFSAEGKAGSCPGLPGRVFTSHV PEWTSNVGYYNKTEYSRLEHAINHEVRGSIALPISDPDSKVPCSAVLELVTTKEKSNFDRELEIVSQALQHVHLRTITPP RLLPQSLSNNKRAALSEIIDVLRAVCHAHRLPLALTWIPCCYSEGIGDETERIRIKEGHISSNEKCVLCIEESACYINDK MVGGFVHACTEHHLEEGQGIAGKALQSNHPFFYPDVKSYDISEYPLVHHARKYNLNAAVAIRLRSTYTNDDDYILEFFLP VNMTGSLEQQLLLDNLSGTMQRICKSLRTVSDAELTGIESSQVGFQKEKVQGIFPISGRNSQTASIGCDYDLDRKMYLKA TNLRNNGIEAARSQAINGSRKQVEKKRSTVEKNVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINK VNRSLKKIQIVLDSVQGMEGGLKFDPCTGGFVAGGSIIQDISAHKSILFPERSAVKDTEPVVREVVSGVPLAPGSPGENS AIELEDDGVCSVGNQLVHSTSVLMSNSYEGELKIDNASSADGSEDSKSMAVDDVTKAQDCPEQNSLGSVLEKEGDQWSLN KYGMGVENSIHDIVCNTNSSISLIELSGDGGNGADEHNHPTSSSMTDSSNGSGSMTLGCSSGSQSFENQKKSKAKSACVV DSGSKMVVKATYRGDTIRFKFDPSAGCFQLYEEVATRFKLQNGSFQLRYLDDEEEWVMMVNDSDLQECVEILGDIGATCV KFLVRDTTGVLRSRSSNSCFLSESS 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 11 981 971 0.0
PANTHER 11 981 971 0.0
ProSiteProfiles 573 661 89 17.154
Pfam 593 641 49 2.8E-26
MobiDBLite 756 791 36 -
MobiDBLite 827 862 36 -
MobiDBLite 836 862 27 -
SUPERFAMILY 879 969 91 3.11E-21
Gene3D 883 964 82 8.5E-12
ProSiteProfiles 885 967 83 19.389
SMART 885 967 83 1.3E-18
Pfam 887 966 80 2.2E-15

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0501000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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