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LotjaGi3g1v0502500.1

Overview

Field Value
Gene ID LotjaGi3g1v0502500
Transcript ID LotjaGi3g1v0502500.1
Lotus japonicus genome version Gifu v1.2
Description Pentatricopeptide repeat-containing protein, putative; TAIR: AT2G15630.1 Pentatricopeptide repeat (PPR) superfamily protein; Swiss-Prot: sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630, mitochondrial; TrEMBL-Plants: tr|K7LT27|K7LT27_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0502500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:92059774..92069280) extracted from Lotus japonicus Gifu genome v1.2.

GTAAGGCCTTCCTTTTAGAAACAAATTTAATTCAAATCATGCCACTGGTTTTTTTTCCAGCGAAACACATCATAAGGTGC ACCTACTTTTACATCGTCCCTGTTTTGCCTCTTCTAACACTAGTGTGGCGTGGCATCATCACTGTTCGTTGTTACTCATG AAGTCGCTTACAATCTTCAATTCCAAAACCATTCCCTTCAGAATCCTCAACCTCAACTCACTCTCTCACTCCCAATCACG CTCTTTCTCCCTTCGCGTTTCCACCCCACCACTCACTGAATCCTCAATCCTTCATTCCATCGAATCTTCTCAGTGGCATT TCATCGAACACCTTGCCCCTCACTTCACCCCTTCCCTCCTCTCCTCCATTCTCACTTCCCTTCACCTGAAACCAGACCAC GTTCTCACCCTCCTCACCCACCTCCACAACCACCCTCACTCCCTTGACCTCACCACCCGATGCCTCGCCGTCTGCATCCT CTACCGCCTCAAATCCCACAAACACTCCCTCCACATCCTCAACCCCCTCATCCACACCGCCAACCCCGCCACGATTCTCG ACGAATTGGCACGTGCCCGCGAACGTCTCAATGTTGGCACCACCGTCGTATTCGATCTTCTCATCAGGGCTTATTGTGAA CTCAAGAAGCCTAATGAGGCTCTGGAGTGTTTCTACTTGATGAAGGAAAAAAAGGTTCTGCCTAAGATTGATACTTGCAA TCAGATGTTGAGTTTGTTCCTCAAGTTGAATAGAATCCAGATGGCCTGGATTCTGTATGCTGAGATGTTCAGGATGCAGA TTAAGTCGAGTTTGCGCACTTTCAACATTATGATTAATGTTTTGTGTAGAGAAGGGAAGTTGAAAAAGGCTAAGGAGTTT ATTGGGCACATGGAGGCTCTTGGGGTGAAGCCTGAGGTTGTTACTTATAATACAGTCATACATGGGCATTGTGTGAGAGG GAAGTTTGAAGCAGCTCGTGAGATGTTTAAGACAATGAAAGATAAAGGACTAGAACCAGATTCTTACACCTGTAATTCTT TCATTTTTGGGATGTGTAAAGCAGGAAGGCTTGAGGAGGCATCTGATTTACTTCGCAATATGTTAAAGTTTGGATTGGTG CCGAATGCAGTTACGTATAATGCCTTGATTGATGGGTTCTGCAACAAAGGGGATCTGGATAAAGCTTTTGCATATAGGGA TGAGATGATAAGTAGAGACATAGTGCCATCTCTTGCTACTTACAATTTGTTTATTCATGCGATGTTCATGGAAGGGAAGA TGGGGGAAGCTGAGAATTTGATTGAAGAAATGCGAGAAAAAGGAATGAAGCCTGATGTTTTTACTTATAACATATTGATT AACGGGTATTGCAGATGCGGGGACGCGAGGAAAGCCTTCAGCCTTTATGATGAAATGGTGGGGAAAAGGATTCAGCCCAC ACTGGTAACATATACATCACTTATATATGTTTTGGGTAGAAAGAGTAGAATGAGGGAGGCGGATTACTTGTTTAAGCAGG CTCAGAAACAAGGCCTTTTGCCAGATATCATAATGTTTAATGCATTGATCGCCGGTCACTGTGCAAATGGTAATATTGAT CGTGCATTTCAACTCTTAGGAGAGATGGATAATGCGAAGGTCCTTCCTGATGAAGTCACTTATAATACCTTGATGCAAGG GTACAGCAGGGAGGGGAAAGTGGAGGAGGCTCGGAAACTTCTTGATGAGATGAAGAGAAGGGGGATCAAGCCTGATCATA TTAGTTACAATACACTCATTAGTGGTTATAGTAAACGAGGTGATGTGAAGGATGCGTTAAGAGTTCGTGATGAAATGACG AAGATAGGATTTGACCCTACGATTCTCACTTACAATGCTCTTATAAAAGGCTTGTGCAAGAACCGTGAAGGTGAGCACGC TGAAGAGCTCCTCAAAGAAATGGTTAGTAAAGGCATTACTCCTGATGACAGTACCTACCTATCTTTAATTGAGGCCATGG AGACTGCTGATGACCTGGTGGGAAATGATGGTGAGTGAATTTGCACTTATCTTCATTTACTTGAAATTGAATGGAGAAAG GGATGTACTAGAAGAAAATAAGTTATTCAGGGACTATGTGGAAAGTTCTATCTTTGAAGTTCGGACACAAGTGTCTTGCC ATTTCTGATTCTAAAAGCTGTGTCATTGAGCAAACATGTGACTGTACATGAAGAACAAGATAATGGAGTTTAGGTACAAT TTTCCTTTGCTCACTTTTGTTATAAGATTATGATTCTTTTTATTTCAAAGTCATGTTAGTTATGTTTTGTATACTTCAGA AAATATTTTTGCTGTTTTTGTTTGAGATTAGAAAAGAATAGCTAACGGTTGAATATGGCCTTCTTTGATGCTATTTGAAA TTACACAGGAAGGTTGTTGTGAATAGGTGCAAAAGTGAGTGAAATATTTATTTATTTTCTAATAAACAATCTTTTCCTGA AAGCTATGTCAGCTCTTTTTTCTGGTTTTATTCACTGCTCATGATCTCAGTCTCTGCATTGTTTTGTAGTTAAATTGTTG CTCTCATCTGGCTATACACACTTGTGGCCTTTTGCAGTATTATACTGCTTAATCCTTGTCAACGTTTATGGTCAAAGTTA TATTCCCCTGATGTGAATAGAGTTTTCTGCTACCATTAGCTGGTGGACATGTCCCCGAGGCTTAGCTCAAGTAGTAAGAG CTAGGGGATATAAGGGTTGGGAGGGATGAATGGTGAAGGGTCCAGGGTTCGAACCTTGGGAATGGACTAATTTACTAACA GTACTAACAACTAACGTTGGCCTATCACGAAAAAAAAGAGCTGCTGGATATGAATAAAGTTGCACCACCTTCTAAATATC TCATCTTACAGCCTCTCTGTCCTTGTGTGCTTGGTTAACACTTGACAATGACATAGCATATTACTTCACAGTTTATACTT TATATGGAGAAAATCTGGCTTATCATTTTAATGTCGTTATCTAAATGTGAGTCTTTATATTATCTGATAATTTTAACATC TCATACTGTGGAAGTCCTTGATAAAAGATGATGGATCAAGACTGGCTTATTCTTCAAGAAAACCAGTAAATCAGTGGAAA GTGAGGCAATCAGAAAACCAATTGCCAATCAAATTAGTCCAAAACCAGTTAAACTGGTGACACTTAATGGCTGAAATTTG ATTTGAACTTTTACCTAGGATTTTGTTTAAGCCGGAAACATTCACATTTTAGTTGGGTTAGCTCTCTCAACAGATATTTT TCTCATACACAACACTCGAACTGTACTTTAGAAAAATAAGTATGTACCATTTGAACCAAACACGTAGGAAATACCATAGA TTAGTGAAATGGTAAATTATTATTTGAGCTCAATTCAACTTTTTTTCCAGTCAAGAACCTAAATACTAAAGTTGAAAACA AGAATTATAGGAGGATGCCCCATCACTTTGCCAAGAGTTACTTCAAACTCATACTTCACCTTCATGTTTTCTTCTTTTTT CTGGCAAATGGATTTGGAAAATGTTCACCAATTGGCAAGGAATGTCACACTTCAAGAATTATAGTGCTGTAAATGTATTG TACAGAACTAGTTATTCATTCATTGCATCAAATAACACTGAACCTTTGGTCACAATCTGTTAGCAATCAATTTTTATATG TAACAAATCCTTTGGTCGTTAACATGTAGACTGTAGTGGCTAATTTTGCAATAGATTTTGTGACGGGTTGTCACGGAGCT TCACCAAAAAATAATGATCATACGAGCATAGTAGTTTTAACATATTTTAATTTCTTCGATAATCTTACATAATTTGCACC ATGGAATCTCATTTTAGTATTTTACTATTTTACATGTCTGTTTTTTTTTGAATGTGACAACTTCATGGTCAGCTACCAAA ATATTATTAGCTCAAATGCCTTTTAGTTCTTTTACTTTTACTTAGTATCTTATTTTAAATTGATAAATATGTTAGAGAAA TAATCTGATTTCTGATTTTTTGTAAAACCATACACAAATAACTTTATAAAATATATAAATGATTATTTTTTAGAAAATTA GTAATTATATCATGAAAATAAGAAATGAGAAACAGACTTTATATATAATATTCAATTGCAGTTCAATTTTTTATACTCAA TCAAATACTAAGGGGTTATATATGTAGTTAAAATTATAATTCTATTCTATTGACTTTGAGTTATAAAGCACCACACACAT AATATGATAATATTATTATGTTTCATCTTCTGTTCTGTCATGTTCCACCATCAAACACTAACTTAATGACATTGCTAAAG TGTGTTTTCTTGATATTACTCATTATAGGCTCTTGTGATTTCTCTGCTTCTTTCTCCCCTCTACTTTCAAATCTTCTCCT TCAATTTCTTTCGTCTGGATTTTTTGTTAAGTTGTGAAAAAAATTGATAAAGTTTGGATTGGATGAAACGAAAAAAAATT CTAAGTCAATCACTTTCTTATTATTGGTGTTGGGTGACTCTGTACAATATACATGTTTTTTTTTCTTGCGTTTCATGAAA AAGGTTTTGGTAATGAGATCAAAAGCGAAAGAATGATGTTAGAAACAATGAATTGATTGAATGATTCTTCTTCGATTCAA TGCTTGAAGTTTACAGCTTATATACAAGTTCCTAATCAGTGAAAGATAAAGAAAACTAACTGACTGACTTCTAACAAACT CTAACTAACTGCTAACAAACTCTAACGGACTTGACTTGTGAGTCAAGTTACTAATTTAAATACAATAATTCCAATAAATG ATTGGAAAATTTTAAAAATATGGATGGAAAATTACCAAAATTGCATAGTTAAAAAAATAGGTGTACTATAACTGCTAAAA AAATTTAGGAGGACAAAATCATGAAATCATAAATATAGGAATTCCTCCGTTTCTGCTGCTGTTCCAACGAGAGTAGTTCC TAAACAAGTTTCTTCCCTGGAATTTCATTAATTCCCAAAATCATTTTGAGAGAAAAAACGTGGTGAACAAGTTGTTCATT TCCAACGTGACTCTGATTCTGTTTTCTCATCAGATCTTCCCCTTACATCTACACACAGAAATTGAAAAACCTTATTATTC TTCACACCATATCATCATGCAGTCGCTTATGGTGCGACGATTTGGAACTCTCATTCTCAACTCCCTCCCCCACTCCCGAA CACGCTCTTTCTCCTCCGTTTCTGCCACCGTTGCTGTTCCCAGTCCCACACCCACTACATTCCCACCACCAATCACTAAA TCCACTCTCCTTCAAGCAGTTGAATCTTCTCAACGACCACTTTTCCCCACACCTCACCCCTTCCATTCTCCCCTCGGTTC AAGCCTCCTTCGACCTCACCACTCGATGCCTTGCCTTTTGCACTCTCTTCCGCCTCTAATACCCCAAACCCTCCGTCCAC CGCCTCCTCCACCCTCTCATTCTCACCTGTGCCACCAATCCAGAGTCAATTCTCAACGAACTGGCACGTGCCTGGGAGTG TCTCAACGTTAACTCCACCTGCATCTTTGATGCTCTCATCACGGCTTATTGTGAACTTGAGAAGCACGATGAGGCTCTGA AGTGCTTCTACATGATGAAGGAAAAAGGGTTTCTACCAAACATTGAAACTTGCAATGACATGTTGATGTTGTTCCTCGAG TTGACTAGAAACCAGGTTGAGGAGTTTATTAGGCGCTTGGAGACTATTGGGGTGAAGCCTGCTATTTATAAATATAACAC ACTCATACTCATACACAATGGAGAGAAGTTCGAAGCAGCTTGTGTGATCTTTCAGGATATGTCAGATGATGGACTTGTTC GATATGCTTATAGCGATAATTCTTACATTTTTGTGATGTATAAAGAAGGAAGGCTTGAAGAGGCATCTGATTCACTTCCT AAGATGTTAGAGTCAGAGTCGGAATTGGTGCCACATGCATTAATATATGATGCCTTGATTGATGAATGTTGCACAAAAGG GATTGAAGGGAGTCGGGAGGATATAGAAAAGACTATTGCATACAAAGATGAGATGATAAGTAGAGGGATAGAGCCAACTC TTGTCACTTACACTTTGTTGATTGAGGCACTGTTCGAGGTAGGGCACTCTTGGGGAGCTGAGGATATGATAAAAGAAATG CAAGAAAAAGGATTGAAGGCGGATGTTTATACTTATAACACATTGATGAGTGGTTATGCTAAATGCAAGTTCAGAGATGC ACACATAGGCCTTTATGATGAAATGGTGGAGAAAAGGATTCAGCCCAATCTGTTGACATATAATACCATGATGCTAGGGC ACTGCAGGTGTTCGGAAGTGGAGGAAGCTCGGAAACTTTTTGATGAGATGAAGATAAGGGGGATCAAACCTGATCATATT AGTTACAATTTACTCATTGTTGGTTATGGTGATAGAGGAGGTGATGTGAAGGAGGCTTTCAGAGTTCGGGATGAAATGTT GAAGAATGGAATTGATCCTACCTTTACCACTTACGATGCTCTTATACTAGGCTTGCGCATAAACCATGAAGTTGAGCAAG CTAAAGAGCTCCTCAAAGAAATGATTAGTAAGGGCATCTGTACTCCTGATGACAAGAAGTACCTAGTTTTAACTGAAACG GTACATAGAGAAAGGTAATGGTATTAACGCACAATTTGCCTTAGCTCAATTTTCTTTGGAGATTATAATTTTTATTTTAT TTTGACAATCATATACTCATATTATTTATGACACAGTCTTTGACAAAATATTGTCTACTGTTTCTCTGTTTGAGATTTAG AAAAGAATAGCTATCGGTTGATTTTGCTTTCTTGCATAAATGCAAAAATGAGAAAAATATTCATTTCTTTACTAATAAAC AATCTCTGCCCTAAATACATGTTTATACTTAGTCTGGTTTTCAGTCTCTACTTTAGTTGGAAATTGCCATATACTTTCAC TATATGGCAAAATATTTCTAGTGTTTCTGTTTATAATCATTGAACAACTATTAATTTAAGCAGCCATGCACCTTTACTAA GAAAATAAACACTATAGATTGAGAAGAAGAACGGATGAGTTAAGAAAAAGACAATAGATTAGTGAAATTAAGGCTACCTA CTTTGGACAACTTGCTAAGGAGGGGTGTGGCAATTAACAACAACAGGGATGGTAAATGCTTTTTCTGTTCTTGCCATTTA GAGGATGTTGTCCATGTCTCCTTTGGGTGCGTTTTTTTCTTACAATCTATGGATGTGTTGCTATTCATGGTTGGGGGTGG TAACTGTACTAGGCCTTGAGCATGAATCTCATTTCTTTCACCATGAACGTTGGGGGAAAAACAAAAATCAGAAGATGTGT TGGAGAACAATCTAGATTAGTGAAAGATAACATGCTAATGTACCGAGTACCACTGACTAGCTTGGCGCAGGGTGTTTTGA GTGTTGTCCTCTGAGAAGTTCTAGAGTTTTTCTGCATTTATTATAAAAATTGGTCTTTGACATCTGCTCTGATGGATTGA TTGGAATTAGAAAAGAGTGGGGGTTTGTGTTTTTGAGATATTGCAAGTAAGAAGCTTTGGAAGTTTGCATCTTATTTCTT GCTTGGGTTGTGAATAGCACAGGGAGTTGTTTGGGGCTCATGTTAATGAAACATGTCATGAATTCCCACTTTTGATTGTA TGCAAAGTTTTTTTTTTTATAAGCTAAAGAAATTGTATTCAAATTTAGCACAATGGGTGCTAAGCCTAAATACGAGAAGG TAGGAATTCCATACTTCGATTTCATGACTTTAATTGTTCTATTTTTTCCTCTAATGAATGTTTTTTTGCTTTGTTGCACT TTGGTGATAGATTACTATTTTACTTTTAATAACATAATATCCAGCTCTACCTTCTTGTCCTATTAGGTGTTTGTGGAATA AAGAAAAAAGAAAATTGTTTAAGGTTACAGATTGAATGTTATAACTATCACTTATTGTCAAAATTGATTATAGAATTTCT TGGAAGAAGGAAGTAACATGAAATTAAAATGTCGGCAGCTCCCTCAGTCATTTTATATTTACAGTTTAAGGTTATACTTG TGATTTAGTGCAATAAATTTCTTCATTTGGTATTGTAATGGTTATAGAGAGTCATGTACCGGTTAACTTCTTTATTAGAA TAATTAGAATAAAGAAGGTAACAAGTAGCTCCCTATCTCATACTCTTTAACCATTACAATACCAAATGAAGTTGTCAAAG AGATGGATAAAATTAAAAACTCTAATTGAGCAGGGGTAGTTTAGAGACTACTTTAAAAGTCAGAGTCAAATAGAAGGATT TGTCACAATGGTTGCCTCCTAAAATGATGTTAACTGATGATTTTGTTCTTTTCTTAAAGGCTGAAGTGGAAGTTGAGATA CTTGATCAGCTTAAAGCTAGCAGGATGAAGAAAATTACTTTCAAGAATCAAGGAGAACTCGAAGTGATATTTTTATGTGC AGATTTAAAAATAGATCCATATGTTGCCCGAGAGAGCAGTGTGGCACATTGATTGATTTTGAAGACACTAAACCAGCTGA CACGAACAATCATATAGCAAAAGCATAAGGTATAAGTTGTCCAGGGATTTCCTTTCATGAGCATTTTTCTCGTGCCTTAA GAGCCTGATTTCTAAATCTACTGTGTATTGCTGAAAATCATTGTTACAAGGGCATATATATGACCACTGAATAGAAAAAT TATCTGATATATGAGTTGTTTGCATGAGGTCCCTTTTTTCCTATCCTTCCTATGTGAACCCAGATAATTGTTTTCTCTTC TTTTTTGGTTTTCTTTTCCATCCTTCCTACAATGAGTACATGAATTATAGTTTGTGACATTGAACAAATTTAGGTTATCT GGTTTGGATCAGTTTGTCGAACATGATTTGTTTTTATATATCATCACTATGTCTATTTCTTCAAAGATTTTGTGTTTCAG CTCACATTCTTCATGATGCAGTTCTCCTCATGTCCATTATGTTGTATTTTAAAGTGAAGAATGATGGTTCTTTGTGCTCC TCTCATGAAGGGTATAGCTCTTAGTATGTTAAGTATTTGTTGCTACTAAATTGATATTGAGAGATGGTGTTATGGAGCTA TTATGCAGCAATTGAGGAATTATTGACATCTTGGTTCAAATATACCTAGCATTTAAGCAGTTGAGGAAGTATTTGGTTTA AATTGGTAGGAATTATTGATGAATGTTCTTATGATATTTCATTATGCAAAAGCTGGTTTATCAGACACCTTTGTCTCTCA AAACAATTTCATGGGTCTTCCTATACTGGCTTTTAGAGGTGGTGCTATTATAAAAAGTTTTAGTGATGTATATGATTGTA AAACTTTGATTTTGCATGCTGTGTACATGGAATCTTCATTTTCTCTGTGATCTCTTAAGTGGTAATTAAAGATATGTTGC GGCTTCCTCAAGTGGAACAATGTACTGCTTTGGAGTTCTCTATTCCCATTTGGGTTTTCTTTTCGTG
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0502500.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAAGTCGCTTACAATCTTCAATTCCAAAACCATTCCCTTCAGAATCCTCAACCTCAACTCACTCTCTCACTCCCAATC ACGCTCTTTCTCCCTTCGCGTTTCCACCCCACCACTCACTGAATCCTCAATCCTTCATTCCATCGAATCTTCTCAGTGGC ATTTCATCGAACACCTTGCCCCTCACTTCACCCCTTCCCTCCTCTCCTCCATTCTCACTTCCCTTCACCTGAAACCAGAC CACGTTCTCACCCTCCTCACCCACCTCCACAACCACCCTCACTCCCTTGACCTCACCACCCGATGCCTCGCCGTCTGCAT CCTCTACCGCCTCAAATCCCACAAACACTCCCTCCACATCCTCAACCCCCTCATCCACACCGCCAACCCCGCCACGATTC TCGACGAATTGGCACGTGCCCGCGAACGTCTCAATGTTGGCACCACCGTCGTATTCGATCTTCTCATCAGGGCTTATTGT GAACTCAAGAAGCCTAATGAGGCTCTGGAGTGTTTCTACTTGATGAAGGAAAAAAAGGTTCTGCCTAAGATTGATACTTG CAATCAGATGTTGAGTTTGTTCCTCAAGTTGAATAGAATCCAGATGGCCTGGATTCTGTATGCTGAGATGTTCAGGATGC AGATTAAGTCGAGTTTGCGCACTTTCAACATTATGATTAATGTTTTGTGTAGAGAAGGGAAGTTGAAAAAGGCTAAGGAG TTTATTGGGCACATGGAGGCTCTTGGGGTGAAGCCTGAGGTTGTTACTTATAATACAGTCATACATGGGCATTGTGTGAG AGGGAAGTTTGAAGCAGCTCGTGAGATGTTTAAGACAATGAAAGATAAAGGACTAGAACCAGATTCTTACACCTGTAATT CTTTCATTTTTGGGATGTGTAAAGCAGGAAGGCTTGAGGAGGCATCTGATTTACTTCGCAATATGTTAAAGTTTGGATTG GTGCCGAATGCAGTTACGTATAATGCCTTGATTGATGGGTTCTGCAACAAAGGGGATCTGGATAAAGCTTTTGCATATAG GGATGAGATGATAAGTAGAGACATAGTGCCATCTCTTGCTACTTACAATTTGTTTATTCATGCGATGTTCATGGAAGGGA AGATGGGGGAAGCTGAGAATTTGATTGAAGAAATGCGAGAAAAAGGAATGAAGCCTGATGTTTTTACTTATAACATATTG ATTAACGGGTATTGCAGATGCGGGGACGCGAGGAAAGCCTTCAGCCTTTATGATGAAATGGTGGGGAAAAGGATTCAGCC CACACTGGTAACATATACATCACTTATATATGTTTTGGGTAGAAAGAGTAGAATGAGGGAGGCGGATTACTTGTTTAAGC AGGCTCAGAAACAAGGCCTTTTGCCAGATATCATAATGTTTAATGCATTGATCGCCGGTCACTGTGCAAATGGTAATATT GATCGTGCATTTCAACTCTTAGGAGAGATGGATAATGCGAAGGTCCTTCCTGATGAAGTCACTTATAATACCTTGATGCA AGGGTACAGCAGGGAGGGGAAAGTGGAGGAGGCTCGGAAACTTCTTGATGAGATGAAGAGAAGGGGGATCAAGCCTGATC ATATTAGTTACAATACACTCATTAGTGGTTATAGTAAACGAGGTGATGTGAAGGATGCGTTAAGAGTTCGTGATGAAATG ACGAAGATAGGATTTGACCCTACGATTCTCACTTACAATGCTCTTATAAAAGGCTTGTGCAAGAACCGTGAAGGTGAGCA CGCTGAAGAGCTCCTCAAAGAAATGGTTAGTAAAGGCATTACTCCTGATGACAGTACCTACCTATCTTTAATTGAGGCCA TGGAGACTGCTGATGACCTGGTGGGAAATGATGGTGAGTGA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0502500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MKSLTIFNSKTIPFRILNLNSLSHSQSRSFSLRVSTPPLTESSILHSIESSQWHFIEHLAPHFTPSLLSSILTSLHLKPD HVLTLLTHLHNHPHSLDLTTRCLAVCILYRLKSHKHSLHILNPLIHTANPATILDELARARERLNVGTTVVFDLLIRAYC ELKKPNEALECFYLMKEKKVLPKIDTCNQMLSLFLKLNRIQMAWILYAEMFRMQIKSSLRTFNIMINVLCREGKLKKAKE FIGHMEALGVKPEVVTYNTVIHGHCVRGKFEAAREMFKTMKDKGLEPDSYTCNSFIFGMCKAGRLEEASDLLRNMLKFGL VPNAVTYNALIDGFCNKGDLDKAFAYRDEMISRDIVPSLATYNLFIHAMFMEGKMGEAENLIEEMREKGMKPDVFTYNIL INGYCRCGDARKAFSLYDEMVGKRIQPTLVTYTSLIYVLGRKSRMREADYLFKQAQKQGLLPDIIMFNALIAGHCANGNI DRAFQLLGEMDNAKVLPDEVTYNTLMQGYSREGKVEEARKLLDEMKRRGIKPDHISYNTLISGYSKRGDVKDALRVRDEM TKIGFDPTILTYNALIKGLCKNREGEHAEELLKEMVSKGITPDDSTYLSLIEAMETADDLVGNDGE
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR46128:SF10
34 215 182 3.6E-237 –
PANTHER
PTHR46128
34 215 182 3.6E-237 –
Gene3D
G3DSA:1.25.40.10
107 230 124 1.3E-16
IPR011990
ProSiteProfiles
PS51375
148 182 35 10.622
IPR002885
Pfam
PF01535
150 179 30 6.8E-5
IPR002885
TIGRFAM
TIGR00756
150 182 33 4.0E-6
IPR002885
Pfam
PF13041
182 231 50 8.6E-10
IPR002885
ProSiteProfiles
PS51375
183 217 35 7.794
IPR002885
ProSiteProfiles
PS51375
218 252 35 12.014
IPR002885
TIGRFAM
TIGR00756
221 252 32 1.5E-7
IPR002885
PANTHER
PTHR46128:SF10
221 308 88 3.6E-237 –
PANTHER
PTHR46128
221 308 88 3.6E-237 –
Gene3D
G3DSA:1.25.40.10
236 352 117 2.4E-38
IPR011990
Pfam
PF13041
252 301 50 2.2E-17
IPR002885
ProSiteProfiles
PS51375
253 287 35 13.318
IPR002885
TIGRFAM
TIGR00756
255 289 35 7.1E-11
IPR002885
SUPERFAMILY
SSF81901
261 419 159 8.37E-8 –
ProSiteProfiles
PS51375
288 322 35 12.748
IPR002885
PANTHER
PTHR46128:SF10
289 622 334 3.6E-237 –
PANTHER
PTHR46128
289 622 334 3.6E-237 –
TIGRFAM
TIGR00756
290 324 35 1.2E-8
IPR002885
Pfam
PF13041
322 369 48 1.1E-13
IPR002885
ProSiteProfiles
PS51375
323 357 35 13.099
IPR002885
TIGRFAM
TIGR00756
325 358 34 2.2E-10
IPR002885
Gene3D
G3DSA:1.25.40.10
353 421 69 4.1E-22
IPR011990
ProSiteProfiles
PS51375
358 392 35 11.871
IPR002885
TIGRFAM
TIGR00756
361 394 34 1.1E-7
IPR002885
Coils
Coil
368 388 21 - –
Pfam
PF13041
392 437 46 1.7E-16
IPR002885
ProSiteProfiles
PS51375
393 427 35 14.272
IPR002885
TIGRFAM
TIGR00756
395 428 34 1.2E-10
IPR002885
SUPERFAMILY
SSF81901
404 599 196 1.36E-6 –
Gene3D
G3DSA:1.25.40.10
422 513 92 1.1E-27
IPR011990
ProSiteProfiles
PS51375
428 462 35 10.161
IPR002885
TIGRFAM
TIGR00756
430 464 35 3.6E-7
IPR002885
Pfam
PF12854
459 490 32 2.4E-10
IPR002885
ProSiteProfiles
PS51375
463 497 35 11.192
IPR002885
TIGRFAM
TIGR00756
466 499 34 3.5E-7
IPR002885
Pfam
PF13041
497 541 45 1.7E-18
IPR002885
ProSiteProfiles
PS51375
498 532 35 15.894
IPR002885
TIGRFAM
TIGR00756
500 533 34 4.5E-13
IPR002885
Gene3D
G3DSA:1.25.40.10
514 622 109 1.7E-35
IPR011990
ProSiteProfiles
PS51375
533 567 35 13.099
IPR002885
TIGRFAM
TIGR00756
535 567 33 1.6E-7
IPR002885
Pfam
PF13041
567 613 47 7.9E-14
IPR002885
ProSiteProfiles
PS51375
568 602 35 13.165
IPR002885
TIGRFAM
TIGR00756
571 603 33 5.2E-11
IPR002885

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0502500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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