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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0507600 |
| Transcript ID | LotjaGi3g1v0507600.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Coatomer subunit gamma; TAIR: AT4G34450.1 coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP; Swiss-Prot: sp|Q0WW26|COPG_ARATH Coatomer subunit gamma; TrEMBL-Plants: tr|I1LQ46|I1LQ46_SOYBN Coatomer subunit gamma; Found in the gene: LotjaGi3g1v0507600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:92464004..92471542) extracted from Lotus japonicus Gifu genome v1.2.
CTTGAGAAGGAGCACCGTAGTCTATTGTAGAGTACCACATCCGATTTCGTACGATATCACATCTACAAGGGGCAAAGACC CTTTTATTTCGTCCGTTTACACATAACATAACTAGAGCAATTTTCTACTTGTTGTTCGTCGTTCTTTCCTCCTCTGTAAA CTTCACTGGTGCACTCTCAGAGGCACCTAACAAATCAAAAAAACACAGAGAGATTGCGTAGTAGCTTCTAGATCTCACAG ATTCACCTGCTCCGCCGATGGCTCAACCGCTCGTGAAGAAGGACGATGACCGCGACGACGAAGGTAATCCCTTCCTCCTC ATCCCCACCAATTCCCCATCCCATTCGATCTGCCCTCTGTTACGCTTGTTCTCGCCATTTTCGTTTCCGCTTGTTGCCAC TGCTGGATCACCGTGTCTCGGTTCCAGATCCAATGTTTAATTTCCGTTTCGAATTGCTCAATGCGCTAGTAGATCACGAT ACTCACTCGGATTCGATTCGTGCCTTGTTGAACTGTCACTTGCCTCTAGTTTGATGTGATTTCGATTCTTCCTCCCTGTA GAGACTTGAATTGATTAAATTATAATAATCTGCAATGCACATCGTTAATTGCCTGCAATTGCTTGTTTGATTGAAAAGGT TTATGGTGATTAGTTGATACTTGATAGATAGTTTAGATTTTCATTTCACTCTTTGTATTCTGATGAATGCTACATATATT ATGATGAATTGATGATATAGTACTCGTATTTCAGAATTAATTATGATCTTTTTGGTTGTTTAACAGCTGACTATTCCCCA TTTTTGGGAATTGAGAAGGGGGCTGTTCTTCAGGAGGCCAGGGTTTTTAACGATCCGCAACTAGATGCTAGGAGATGTTC ACAGGTGTGTGTGTGTTTTTCCCCTTAATAATGTTTTCTTTGTGTTATTCAGTGATTGCATTTTGACATGGTATTGTTTG TTATGCTTTTCCAGGTTATCACAAAACTCTTATACCTACTGAATCAGGGAGAGTCATTTACAAAGGTCAAGAGGTTTTCC TAACCATTTTTCTTTGTTACATATCGTTGCTTATTTGTAGATTGACTTTACGGAATTATGTTAGAGTTATCCTTTTTCAT TAATTTGTTCTTGCTGCAATTTCATAGGTCGAAGCCACGGAAGTTTTCTTTGCTGTGACCAAGCTTTTCCAGTCTCGAGA TCTTGGGTTGAGGAGAATGGTCTACCTTATGATAAAGGAACTCTCCCCCTGTGCAGATGAGGTTACTACTTCTCATGAAA TTTTTACTACTTGTCAGATTCATGACTATGGTCTGTGTATTACTAACTTAAATTCTGACTGTTCTATCTCCTTTTTTTTT TAAAGGTAATTATCGTCACAAGCTCTCTCATGAAGGACATGAATAGCAAGACTGATATGTATAGGGCAAATGCCATTCGT GTGCTCTGTCGTATTACGGATGGAACTCTCCTTACCCAAATTGAGAGATATTTGAAACAAGCAATTGTAGATAAGAATCC AGTTGTTGCAAGTGCAGCCCTAGTCAGTGGCATTCATATACTCCAGGTATTGTTAATATCTATTTGTAATTCCTTATAAC TGTAAATTCCGTTTTGCCGCTTTCTCATTTAATGTCCCCCATTTCAGACCAATCCTGAGATTGTAAAGAGGTGGAGCAAT GAGGTTCAGGAAGCTGTTCAATCAAGAGCAGCTCTTGTCCAATTTCATGCACTGGCTTTGCTACATCAGGTACGCTGGAC GAATGGTTTCATAATCTACAATTTCTTGGTGTATTAAAATAAATTCTACTTTTCCATAAACTATTTTAAAACTTCATAGA AATAAGTTGAAAATAGATTATAAATAAGCATAAGTTCTTTTTCATAAGCTATTCTGAAGAAAAATAAGCTCAAAACGGCT TATAGGTAGGTCATATGTTATTTACATAATCTCTCCCAAACACTCGCATAAGCGCTTATGCTGTAAGATGAGCTCAAATA AGCTCTTCCATACGGGGCCTATGCCATTCTCGTAGTTCATTTAGTAAACCAGTGCTGTTGTATAATTCATCATTTATGTA TAGCAAGAACACTTTCTTACATGGTCAGTTTTTTGCTCGTGACAGTTAAAATTCATTAAAGAGTCAGTATGAGCTAGTGT TTCATTTTATTTTTAATCCTATTAGATATGAGAAATCACTCATGTGCCTTCACCTAAGTCCTAATAGCTTAAGCTTTCGA GATGCTTAATTTATGATCTAATATCAGTCTCTCTATGACCAATAGTGTGTTTCAAAACTCGTTTGGAATGGACTTCGAGG CACATCTGTCCATAAGCTACAAGTAGTAGCTTTTTAAGTGGTCTCCTTGTTATCCCCATTTTTCTAACTAAAAAGTTCAA TTTCAATACAAGGTAGATCCTTGTAACCTGTGCAGTGTTCATTGTCTATACTTGGACGTCAAAAGACTTTTCCATAAGGG GCATGTTAGATACAAAAATCATTTATATGGCCTAAACCACTTAAGCTTTTGGGATAATTAGTTCATGTCAAAATCTTTCA CCGATTTACAAATGAAATGAATTTTTCCGAGGGATTTGACTTTTGTACAAGCTTATCAAGGAAATGATTTTACCGCAATA AAAGGAAGCAAAACTACTTGAGGTGCAACTGCAGAAGTTGATAACTGCAGAAGTTGATATTTAATTGCTTGGTTTGTAGA CTACCTTACGATATTTTGTCACCTACTGCATACTCCTGTTAATAATCTTGCTGCAACTTACAAGTGGCTGCATTCTGTGG CACTGTGAAAAGTTTTCAAAACATCCTTGTGTGGCTGAATGTGGCAAAGTTTGTATATGCTCTTAACCTCTTGTGGTAAA TTAGTAGAAACTTTCCTACATTGATTGTATATGATTGTCATCTGTAGATATTGTGTGAGCATGATCATGATGGAAATTCT ATTTCATTAATTTATATTACTCTAAAGTCCTCCTATGAGTTTAGGGTTTACTCTAAAGTCCTCCTATGAATTTAGGGTTT AAACCCTAAACCATGATGGAAATTCTGTAGATACCGTGTGAGCATGATCATGATGGTGATGGAAATTATATTTCATTAAT TTATATTACTCTAAAGTCCTCCTATGAATTTCTACACCATGTAATTTTGATTTGACATTCTGAGTATCATACTTTGTTAA TCACATAAAACAAATAAATTATAAAATATAAACACAGTTATTGACACATGGTGGCTTAAAACATTGCAGATACGACAGAA TGATCGGCTAGCTGTTAGCAAGCTGGTTACCAGCTTGACAAGAGGAAGTGTTCGCTCTCCTTTGGCCCAATGCCTTTTGA TCCGCTATACAAGTCAGGTGTGTGATCCTCTTCTTATACAGCTGCCACTGACATGGTGTTTATTTGCATTATATTTATGT ATCATAATATCTGCAGGTTATACGGGAGGCAGGAAATAATACACAAGCAGGAGACCGCCCCTTCTTTGATTTTCTTGAGA GTTGCCTTCGTCACAAGTCCGAGATGGTGATTTTTGAAGCTGCTAAGGCAATTACAGAGCTCAACGGTGTAACTAGCAGA GAATTAACTCCAGCAATTACTGTTCTCCAGCTCTTCTTAAGCTCTTCTAAGCCAGTCTTGAGATTTGCTGCTGTCCGCAC CTTAAACAAGGTTGACCTTCCTTAATTCCATAAATTTCAGTAGAAACGTCTATGCTTAAGAAAGGATCTATCGGAATTCC CTTTCTGTGGGAAGTGAGCATTTTGCTTTTCTTCGTGCTATGGTTTTGGGGGAATCGAAAAAAATCGTAAAATTTTGTCA AGCTTCTAATTATTGCTAATTTTTAATGGTTAAACTTTATCTTTATTTTTATTTATTTTTGTTGAATACTGTTTTGAACT CGGCAGGTGGCAATGACACATCCAATGGCAGTCACTAACTGCAATATCGATATGGAAAGTTTAATCTCTGACCAGAATAG AAGCATAGCCACACTGGCTATTACTACTCTTCTAAAGACAGGAAATGAATCAAGTGTAGAACGTCTTATGAAGCAGATTA CAAATTTCATGTCTGATATTGCTGATGAGTTCAAAATTGTTGTTGTTGAAGCAATAAGATCATTGTGCTTGAAGTTTCCG TTAAAATACAGATCCCTGTGAGTATATGTGTCATTTTATAGGTTTCTTTCTCCCAGGTGTTGTCTTTCATTTGAATGGTG TTCCTAGATATTGGTCTAAATTACTGCTTTCTGTTCAGGATGAACTTCCTGAGTAGCATTCTTAGAGAAGAAGGTGGTTT CGAGTACAAGAAAGCAATTGTTGATTCAATTGTAATTCTGATTAGAGATATCCCTGATGCTAAGGAGAGCGGGTTGCTTC ATCTTTGTGAGTTCATTGAAGATTGTGAATTCACTTATTTGTCCACACAGGTTGTTTTCGCTCTTTGTCATTTACTGTTT GTGTTTTTGAATTTACTTTATGTTGTTAATTTTCTTCCCCTTGTAATTTAGATACTTCACTTCCTGGGAGTTGAAGGACC CAAAACATCAGATCCCAGCAAATATATACGTTATATTTATAACAGAGTACATCTTGAGAATGCAACTGTTAGGGCCAGTG CTGTGAGCACACTTGCTGGGTTTGGTGCTGCAGTTGATGCTTTAAAGGTATTAGTTGTCCCTGTTTATTATTTAATTTCC CTAGTAGATTTAACTAATATATTTTTTTTGGTGACAGTATTAATATTTCATAATTTCTCTTTTCAGCCCCGCATATTTGT TCTGCTAAGGCGATGTCTTTTTGACAGTGATGATGAGGTTGATTTCTCTATCATATCTTCCATTGCATTTCTATAATTAT GTGATTTATGAGATCTTGCAATTTTGCAACTCTGGAAGTGTAAACCTATACTTGCTTTGATTAATATTTGGATGCTTTTG ATTTTTTTGCAGGTTCGTGATAGAGCAACACTTTATCTGAACACCCTTGGAGGTGATGGACTTGGGACTGAGAATGATCG GAAGGACTTCCTCTTTGGGTCACTTGATGTCCCACTTGTCAATCTGGAGACTAGTTTGAAAAACTATGTAAGTTCTCTAA ATTTTTCTTGTTTTTCATTAGTGGAGGACATACCTCATCGTCTCATATCTTTAATGTTAATGCAGGAGCCTTCGGAAGAG GCTTTTGATATTAATTCAGTGCCAAAGGAGGTCAAGTCTCAGCCCCTTGCAGAAAAGAAAGCTCCTGGTAAGAAGCCAAC TGGTTTGGGTGCTCCTCCCAGTGGCCCCCCATCTACTGCAGATTCATATGAAAGGCTACTTCTTTCCATTCCTGAGTTTG CAAACTTTGGGAAGTTATTTAAGGTTCTGTTACTCGATTCTTCTCTCACAGTTCTATAATTTTATATTTTTCTTTCCATT TCTCATGAGATTATATGTATTCTGATGTTATATTTCTTACCAGTCCTCAGCACCTGTGGAGCTTACTGAAGCTGAGACAG AATATGCAGTTAATGTTGTTAAACACATTTTTGATAGGCATATTGTGTTTCAGTACAACTGCACAAACACAATACCGGAA CAACTATTGGAAGATGTAAGGGCTGATATAGATACTGTATGATTTCACACAATAATGCAACTCCAGGTTTTTCTGTATAA CCTTTCCTCTTCCTCCTATTTCAGGTTAATGTAATTGTGGACGCTTCAGAAGCAGAAGAATTTTCTGAGTTGTTCTCCAA GCCTCTCAGATCTCTTCCTTATGATTCACCCGGGCAGACTTTTGTGGCATTTGAGAAGCCTGAGGGATTGCCAACCACCG GAAAATTTTCTAACACTCTGAAATTTATTGTGAAAGAGGTACTTGTCCCCTTTATCCTTTGGGAAGCTCTGTGGTTTGAT TTTTGTTCGTCTCAGACCCCCAATGTATTTATCATGATGTGTATATTTCAAGCATGAAGCTTGTTTTGTTTTTCTTCGCC ATGGAATTTGTGGAGAATAAAACCTATGAAGAGTTTTTTGTGGAAACTTCTTCATTGCTTCATAAATTGAATATTGACCA GGTTGACCCAACCACTGGTGAGGCTGAAGATGATGGCGTTGAAGATGAATATCAGCTGGAGGATCTGGAGGTTGTTTCAG CTGATTACATAGTGAAAGTAGGGGTGTCTAATTTCAGGAATGCATGGGAAAGCATGGGCCCTGATTGTGAACGAGTGGAT GAATATGGTCTTGGCGCAAGGGAAAGCTTGGCTGAGGCTGTAAATACCGTCATCAATCTTCTTGGCCTGCAGCCTTGTGA GGTAAGCCAATGATATGAATTGTTGCTCTAGTAAATGTCCGTTGTTATTAAACCCATCTCTATTAAACTGGTTATGACCT GTTTGTACGAATTTTTTTTCTGCAACATAAGGTACTGTTCTGCTTGTTATATGCCTGCCAAGAGACCAATATAATGTTGA TAGCATTACAGATTCAGTTCCCGCATATATTAGAGAGCACAGACAAAAACTTGGCATTTTCTCATAATTTTAGGTCTAAT ATTACTCAAAGGTGCATATACAGTTGATGCATATAAAGACTTCAATTCTTGCAATTAGCTTACTTCATTTAAAATATTTG AACTTGAACTGTTTGCCAAACTCAAGCATGTATGCATCTAAAATGCTGTTGTTTGGACGGAATGCTTTTGTCTTCATGTG CATGCACACATGTGCACATGATGTTAAATCTGATATGATGTTAGTTCTGACATCATCTAGAATTCTAAACATTTGGCTTA TACCTTACCATTGAGCAAGTGATTTTTCTAACTCCGTGATACCTTGGAACTTCTCGTAAGAGGAGAGCGTCTTTCATTAG TGCCTGTTGACGACATCTTTCTTATTAGTTTATTGTTCACTACTTGCAGGGCACAGAGGCAGTACCACCCAATTCAAGGT CGCACACATGCTTATTGTCAGGTGTATTCATAGGGAATGTGAAGGTACTTGTGCGGTTGTCTTTCGGACTTGATGGTCCA AAGGATGTTGCCATGAAACTGTCTGTCAGATCCGACGATGAAACTGTCAGCGATGCCATCCATGAGATTGTGGCAAGTGG TTAGTTCACTTAAGTCAAGAAAACTCGGCCTGTGTTTTTTGTTGAGAAAATTGGTGTGAGACAGCCACTTAGATTAGATA GGTGTGTGTAAAGAGTTTCAGAACTGTATGCTTGGATTTAGTATATGCAATTTATTTGTTACTCACAGCAAACTTGTTAG ACTAGCAACGATACACATCAAGTATCATGTTGGGTTTATTGGAGTAAACTTCCATAGTCATTATTATACTTCATTTTCTT TGTAGCAAAATGTAATATGAATTTTGAAGATTTTTCATTATATTTGTTTTGTCAATGAATTGGATATTTTTTAAATTGTA ATTGTTTAGCCCAAAAGGTACGCCTCTTTTATTTGCCATAAGCCTGCCTTTTCTGTTTCATGATAAGGATGCGTTATGGT TCACTGACGTTGATGTGCT
CDS sequence (LotjaGi3g1v0507600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCAACCGCTCGTGAAGAAGGACGATGACCGCGACGACGAAGCTGACTATTCCCCATTTTTGGGAATTGAGAAGGG GGCTGTTCTTCAGGAGGCCAGGGTTTTTAACGATCCGCAACTAGATGCTAGGAGATGTTCACAGGTTATCACAAAACTCT TATACCTACTGAATCAGGGAGAGTCATTTACAAAGGTCGAAGCCACGGAAGTTTTCTTTGCTGTGACCAAGCTTTTCCAG TCTCGAGATCTTGGGTTGAGGAGAATGGTCTACCTTATGATAAAGGAACTCTCCCCCTGTGCAGATGAGGTAATTATCGT CACAAGCTCTCTCATGAAGGACATGAATAGCAAGACTGATATGTATAGGGCAAATGCCATTCGTGTGCTCTGTCGTATTA CGGATGGAACTCTCCTTACCCAAATTGAGAGATATTTGAAACAAGCAATTGTAGATAAGAATCCAGTTGTTGCAAGTGCA GCCCTAGTCAGTGGCATTCATATACTCCAGACCAATCCTGAGATTGTAAAGAGGTGGAGCAATGAGGTTCAGGAAGCTGT TCAATCAAGAGCAGCTCTTGTCCAATTTCATGCACTGGCTTTGCTACATCAGATACGACAGAATGATCGGCTAGCTGTTA GCAAGCTGGTTACCAGCTTGACAAGAGGAAGTGTTCGCTCTCCTTTGGCCCAATGCCTTTTGATCCGCTATACAAGTCAG GTTATACGGGAGGCAGGAAATAATACACAAGCAGGAGACCGCCCCTTCTTTGATTTTCTTGAGAGTTGCCTTCGTCACAA GTCCGAGATGGTGATTTTTGAAGCTGCTAAGGCAATTACAGAGCTCAACGGTGTAACTAGCAGAGAATTAACTCCAGCAA TTACTGTTCTCCAGCTCTTCTTAAGCTCTTCTAAGCCAGTCTTGAGATTTGCTGCTGTCCGCACCTTAAACAAGGTGGCA ATGACACATCCAATGGCAGTCACTAACTGCAATATCGATATGGAAAGTTTAATCTCTGACCAGAATAGAAGCATAGCCAC ACTGGCTATTACTACTCTTCTAAAGACAGGAAATGAATCAAGTGTAGAACGTCTTATGAAGCAGATTACAAATTTCATGT CTGATATTGCTGATGAGTTCAAAATTGTTGTTGTTGAAGCAATAAGATCATTGTGCTTGAAGTTTCCGTTAAAATACAGA TCCCTGATGAACTTCCTGAGTAGCATTCTTAGAGAAGAAGGTGGTTTCGAGTACAAGAAAGCAATTGTTGATTCAATTGT AATTCTGATTAGAGATATCCCTGATGCTAAGGAGAGCGGGTTGCTTCATCTTTGTGAGTTCATTGAAGATTGTGAATTCA CTTATTTGTCCACACAGATACTTCACTTCCTGGGAGTTGAAGGACCCAAAACATCAGATCCCAGCAAATATATACGTTAT ATTTATAACAGAGTACATCTTGAGAATGCAACTGTTAGGGCCAGTGCTGTGAGCACACTTGCTGGGTTTGGTGCTGCAGT TGATGCTTTAAAGCCCCGCATATTTGTTCTGCTAAGGCGATGTCTTTTTGACAGTGATGATGAGGTTCGTGATAGAGCAA CACTTTATCTGAACACCCTTGGAGGTGATGGACTTGGGACTGAGAATGATCGGAAGGACTTCCTCTTTGGGTCACTTGAT GTCCCACTTGTCAATCTGGAGACTAGTTTGAAAAACTATGAGCCTTCGGAAGAGGCTTTTGATATTAATTCAGTGCCAAA GGAGGTCAAGTCTCAGCCCCTTGCAGAAAAGAAAGCTCCTGGTAAGAAGCCAACTGGTTTGGGTGCTCCTCCCAGTGGCC CCCCATCTACTGCAGATTCATATGAAAGGCTACTTCTTTCCATTCCTGAGTTTGCAAACTTTGGGAAGTTATTTAAGTCC TCAGCACCTGTGGAGCTTACTGAAGCTGAGACAGAATATGCAGTTAATGTTGTTAAACACATTTTTGATAGGCATATTGT GTTTCAGTACAACTGCACAAACACAATACCGGAACAACTATTGGAAGATGTTAATGTAATTGTGGACGCTTCAGAAGCAG AAGAATTTTCTGAGTTGTTCTCCAAGCCTCTCAGATCTCTTCCTTATGATTCACCCGGGCAGACTTTTGTGGCATTTGAG AAGCCTGAGGGATTGCCAACCACCGGAAAATTTTCTAACACTCTGAAATTTATTGTGAAAGAGGTTGACCCAACCACTGG TGAGGCTGAAGATGATGGCGTTGAAGATGAATATCAGCTGGAGGATCTGGAGGTTGTTTCAGCTGATTACATAGTGAAAG TAGGGGTGTCTAATTTCAGGAATGCATGGGAAAGCATGGGCCCTGATTGTGAACGAGTGGATGAATATGGTCTTGGCGCA AGGGAAAGCTTGGCTGAGGCTGTAAATACCGTCATCAATCTTCTTGGCCTGCAGCCTTGTGAGGGCACAGAGGCAGTACC ACCCAATTCAAGGTCGCACACATGCTTATTGTCAGGTGTATTCATAGGGAATGTGAAGGTACTTGTGCGGTTGTCTTTCG GACTTGATGGTCCAAAGGATGTTGCCATGAAACTGTCTGTCAGATCCGACGATGAAACTGTCAGCGATGCCATCCATGAG ATTGTGGCAAGTGGTTAG
Protein sequence (LotjaGi3g1v0507600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAQPLVKKDDDRDDEADYSPFLGIEKGAVLQEARVFNDPQLDARRCSQVITKLLYLLNQGESFTKVEATEVFFAVTKLFQ SRDLGLRRMVYLMIKELSPCADEVIIVTSSLMKDMNSKTDMYRANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASA ALVSGIHILQTNPEIVKRWSNEVQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGSVRSPLAQCLLIRYTSQ VIREAGNNTQAGDRPFFDFLESCLRHKSEMVIFEAAKAITELNGVTSRELTPAITVLQLFLSSSKPVLRFAAVRTLNKVA MTHPMAVTNCNIDMESLISDQNRSIATLAITTLLKTGNESSVERLMKQITNFMSDIADEFKIVVVEAIRSLCLKFPLKYR SLMNFLSSILREEGGFEYKKAIVDSIVILIRDIPDAKESGLLHLCEFIEDCEFTYLSTQILHFLGVEGPKTSDPSKYIRY IYNRVHLENATVRASAVSTLAGFGAAVDALKPRIFVLLRRCLFDSDDEVRDRATLYLNTLGGDGLGTENDRKDFLFGSLD VPLVNLETSLKNYEPSEEAFDINSVPKEVKSQPLAEKKAPGKKPTGLGAPPSGPPSTADSYERLLLSIPEFANFGKLFKS SAPVELTEAETEYAVNVVKHIFDRHIVFQYNCTNTIPEQLLEDVNVIVDASEAEEFSELFSKPLRSLPYDSPGQTFVAFE KPEGLPTTGKFSNTLKFIVKEVDPTTGEAEDDGVEDEYQLEDLEVVSADYIVKVGVSNFRNAWESMGPDCERVDEYGLGA RESLAEAVNTVINLLGLQPCEGTEAVPPNSRSHTCLLSGVFIGNVKVLVRLSFGLDGPKDVAMKLSVRSDDETVSDAIHE IVASG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 885 | 885 | 0.0 | – | |
| PANTHER | 1 | 885 | 885 | 0.0 | ||
| PIRSF | 7 | 883 | 877 | 0.0 | ||
| Gene3D | 23 | 316 | 294 | 1.5E-114 | ||
| Pfam | 29 | 540 | 512 | 1.9E-127 | ||
| SUPERFAMILY | 29 | 540 | 512 | 7.68E-93 | ||
| MobiDBLite | 589 | 618 | 30 | - | – | |
| SUPERFAMILY | 615 | 769 | 155 | 1.62E-55 | ||
| Gene3D | 615 | 766 | 152 | 8.6E-58 | ||
| Pfam | 620 | 765 | 146 | 1.5E-56 | ||
| Gene3D | 767 | 883 | 117 | 1.0E-37 | ||
| Pfam | 768 | 882 | 115 | 1.2E-36 | ||
| SUPERFAMILY | 770 | 882 | 113 | 3.53E-34 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Structural molecule activity | The action of a molecule that contributes to the structural integrity of a complex or its assembly within or outside a cell. | ||
| Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. | ||
| Biological process | Vesicle-mediated transport | A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane. | ||
| Cellular component | Membrane coat | Any of several different proteinaceous coats that can associate with membranes. Membrane coats include those formed by clathrin plus an adaptor complex, the COPI and COPII complexes, and possibly others. They are found associated with membranes on many vesicles as well as other membrane features such as pits and perhaps tubules. | ||
| Cellular component | COPI vesicle coat | One of two multimeric complexes that forms a membrane vesicle coat. The mammalian COPI subunits are called alpha-, beta-, beta'-, gamma-, delta-, epsilon- and zeta-COP. Vesicles with COPI coats are found associated with Golgi membranes at steady state. |
Expression pattern of LotjaGi3g1v0507600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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