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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0511100 |
| Transcript ID | LotjaGi3g1v0511100.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sec14p-like phosphatidylinositol transfer family protein; TAIR: AT2G21520.1 Sec14p-like phosphatidylinositol transfer family protein; Swiss-Prot: sp|F4IHJ0|SFH8_ARATH Phosphatidylinositol/phosphatidylcholine transfer protein SFH8; TrEMBL-Plants: tr|B0BLI9|B0BLI9_LOTJA CM0216.430.nc protein; Found in the gene: LotjaGi3g1v0511100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:92823161..92828476) extracted from Lotus japonicus Gifu genome v1.2.
CCTCCATCCTCATTTCCACCGCCATGTGTCAGTCACACCCCTCTACCTCTTCCTATCTTTAACCGGCAATTAAAACCATG TGATTAATGATAACATTAATTTGGATGATTAGTGTCTTTAACACTGTGATTTAATGTAGGTTGAGTCTCAGCAGGTAATA GCAGAGTGCAGAGAGCAGAGCAGTGACATTCCAATTCCAATTCCAATTCTTCTCGTGATTCCCGAACATTCTCTTCATTA TTCCACGCGCCACTCTCACACGTTCCACGCGCCTCCTCCTCAATTCTTCCTAGGGTTTTCCCAACTGTGAATGTACCTTT GCTCCGACATTCACCACCGTTGCACAATGTCCGGCCCGCTCGACCGTTTCGCCAGACCTTGTATGAATGTTCCTTCTCTT TCTCTTTTGATCTCATTCTGGTTTTGTTTGTGTTGTGTTTGACTGTTTCTGTTTTTCTTGTGTGTGTGTGTGGTTTGTTT ATTTTTCATGTTTTGGTTTTGATAGGCTTTGAGGGATTCTACGGTAGTGATGAGAGAAAAGAGAGGAAGTCTGATTTTGA GAACTCTGAGGATGAAAGGAGGACCAGAATTGGATCTCTCAAGAAGAAGGCCCTCAATGCATCTTCCAAGTTCAAGCACT CTTTGAAGAAAAAGAGCAGCAGGAGGAAAAGTGACGGGCGGGTTAGCTCTGTTTCCATTGAGGATGTTCGGGATGTTGAG GAGTTGCAGGCTGTTGATGCCTTTCGCCAATCGTTGATTATCGATGAATTGCTTCCGGAAAGACATGATGATTACCACAT CATGTTAAGGTGCCCTACATTGGTCTTGAGTTGAATTTATTTATTTGATTGCCCTGCCCTTGTTGAGTTCAATGATCTTA TACTGTAGTACTTTCTTAATTTATATATTTCTCAGATTTCTGAAAGCAAGGAAGTTTGATGTTGAAAAAGCAAAGCATAT GTGGGCCGATATGCTACGATGGAGGAAGGAGTTTGGCGCCGACACTATTATGGAGGTAACTGCAGATACAACTTGGATTG TTGCTTTAGCTTCTGCAGATTTAAATTTAATAGAACTTGGATTGTTGCTTCATCTTGGCTTAATATTTCATGTTTGTTTC AGGATTTTGAGTTCAAAGAATTAAGCGAAGTTGTAAAATACTATCCACATGGCCATCATGGTGTTGATAAGGAAGGAAGA CCTGTTTACATTGAAAGGCTTGGAAAAGTGGATGCAAACAAACTTATGGAAGCCACTACTATGGATAGATATGTAAAGTA CCACGTACAAGAGTTTGAGAAATCTTTTGCGATAAAGTTTCCTGCCTGCACAATTGCTGCCAAAAGGCACATAGAATCGA GCACTACGATCTTAGATGTTCAAGGCGTGGTATGTTGCCATTAGTTCTTCCTCATTGCATTTTACCTACGAATCTCTATA ACATGCAAAAAAACTTATGTTATAGTGTCACTTCTAGGGCCTTAAGAACTTTTCAAAGTCTGCCCGGGAACTCATGATGC GATTACAAAAAATTGATGGCGACAATTACCCTGAGGCGAGCAATCTCAATTCCTCTCTTATTTTCTTATGTTCCTTATTT TGCTTATTGGAAATTTTGAAGATAAACATGTACTAAGGTCCCCAATTCTTTTATTGATGATACAGACTCTCTGCCAAATG TTTATCATAAATGCTGGCCATGGGTTTAGGTTGCTGTGGAACACTGTCAAGTCTTTTCTTGATCCTAAAACAACTTCAAA GATTCATGTATGTAAACGTGATATTTTCTAGCTGTCTAAGGCTCTTTTCTTGATGGTTTAAGGCTGCTGACATTGTTTGA TGTCTCTTTGGAAACATCACTTAGGTTCTTGGAAACAAGTACCAAAGCAAACTGCTCGAAATAATCGATTCCAGGTACTT TATCGACATATATCTTAAATGTTTCTATTTCCCTGTATGTTTTCCATTTTCTGAGTATTTTTTTCCTATTGACGAATGTA CTGTACTTTTAAAGCATCACTACCAATTTGCATTATCCAAAGGCTTAATATTTTTTTTTGGTGAACTTAAATGAAGTGAG TTGCCAGAGTTTCTTGGAGGAACCTGTACCTGTGCAGATCAGGGAGGTTGCCTCAGATCCGATAAAGGGCCCTGGAAAAA CCCTGAAATCTTGAAGGTAGTATGCTGGCCTTGCTTGGCTGCTAATAAGTTCATCACGTGTTCTTCTATGTCAATCTTGT TATATGCTAACTGTTAATTACATGTTGACATTTTGCAGATAATTCTCAGTGGTGAAGCAAGGCGGGCAAGGCAGGTAGTA AAAGTTCTAAACAGTGAAGGAAAGGTTATTGCATATGCAAAACCGCGTTGCCCAATGGTAATTTGTTGTATGATATATTA TTGCCTGGACTGAGTGGAGCCTAGTTTTTTTTCCCTGAAGAAGCAGTGGAGCCTGATTTGATTCCTTTGTACTCTTTAGT GTCCTTTTCATCGTGTAACTTGATTGACCATGACACTTCTTTCTTGCAGATAAAAGGCAGTGATACATCAACAGCTGAAT CAGGGTCTGAAACTGAAGATATAGCTTCTCCGAAAACAATGAAGAGTTACTCGCACCTTAGGTTGACCCCTGTTCGTGAG GAAGTAAGCGATGTCCTTGTGATCTGTTCTCATGTTTCTATTAAATAGCGGAGGTTTCAGTTGATGGACTGTAGGTCTTT TGTGTACCCGTTTTCCCCTTAAATTTAATGGTAGCAAATTTTTTATTTTTCTTGGATTCCTATTATTCTGGGAGTTTAAG GGGTATTATTTTAAATGTAGCTTTTCAAGGAGATTTGTTCATAGGATTTATCCATGGTCTATCCCAAACGCACAAATTAT TTACAAGTTGTGTTCTTTGTCAGGCTAAGGTTGTTGGAAAGTCAAACTATGCTGGTAGTGGCAACTTGGCAGGGTATGAC GAATACATTCCGATGGTGGACAAAGCCGTTGATGCTGGCTGGAAGAAGCAAGCATTACTCCAGATCCAGAGGTCTCATAG TACAAAAGGTTAGCTTTAATTGGTATTTGTAGTAGACATGCCTTTTCTGGGGCTTATTCACCAAAAATAGATACAGTTAT TTGAAAAAATAATCCGACACATCAAAATTCATTTTCAGCCATGACACTAATTGGTTCACTAACTATGGAATATGGAGGAC ATCTGATGGATGTACATGTATTAATGTCTGGACTCCAGATCTCCATTTTGTAATATTTTCCCATTTTGGTATGATAAGAA AAGATTATGTTCAATTAAATAATGAATTTTGGACTAATCCATGTTTGTTTGAAATTAGCTGATATTTTGATAGGCTTTAT TGAAGATATGAACTTGGTTTTCTCTTAATGCTCATGTAATATCTTTTGGTATGTATGCTGCACACCATGCACCTGTTGCC ATAAATAGCAATCCACTCCCTTGTTTTTAATTGCTATGAAGTTGCATGGCCCTCTCTTGACCCTTACAGGGATCTATGGA AAATCAATTTATATCATCCCTTATATGTGTTGACACTTGACGCCACTTTTGAGTTTTATTAGAACATTTTATTGGCTAGA TGCATTTCGTCTAAGCTTTGTCTGGTGCAACCAAGCAGTTCTCTTTATGAAAATGGCGCATTGCATCTTGCATACTTAAT TTCTTCTAAGTTAGACACAAACCATTTCAGGGCCAGCACTTGAGAGTTTAAAGTCTTGGTATAGTTGATCCTTGACATGA TATTTGTGCTTTGTCAATGCTTTGAGCACAAAAGGCTTTTGTTTGAAGCTTTGGTTTGCTTAGGAGATAAACAAGTCCAG AAGTCCTGGAACTGCACCTAAAAGCTTGAGCTTTTGGGAGAGTTGGTGCCTTGCTTGGTTTCTCGACTTAAATTAATGTA ATTTGCTGAGGAAATATTAAATTGAAATTTCCATTACAGGAACACCTCCCCTTCCTGACACTCCAAAGGCTCCAGAAGGG ATTCAAGCTCGGATTTGGGTAGCCGTGACCTTTTTCTTTTTAACCCTGTGGACTCTCTTCCTCTCAGTTGCATGTCGTGT GACCAAGAAACTCCCTACAGTATCATCTACTGATTATCTGAGAACTTCAGAGCCAACTCTTGATACAACAAATAAGGAAG ACTCTGGTTCTTCTTCACTGACTGCAGCACATACTGAGGCAGATCTCCTATCCTCCATGATGAAAAGGTTAGGTGAGCTT GAAGAGAAGGTTGAAACTCTCCAATCTAAGCCATCGGAGATGCCTAATGAGAAAGAGGAATTGCTAAATGCTGCTGTCTG CCGGGTGGATGCTTTGGAAGCAGAGCTAATTGCAACTAAAAAGGTGGAATGCTATAATTTAGTTTTTCATTATCTTTAAA GAAACTGCAGTCGTGATGATGCATTTTATGCGTACATGTATTACATTGAAGTATTTTCAATTTTCTGTTATTTTTTCTTA TTTCGTTTGTGATCTTTAAAATAGGCACCCCCTTATTTATGTTTGGGTGCATTTCCTAAATGTCGTATTATAGCTGTGGA TGTAGTGAATGCATAGCTTCTCATTGTTTTGTTCACCTGAGCAATTTTCTGACGTTTGGGTTTTTTTGGATTGTGCAATA GGCTCTCTATGGAGCTTTAATGAGGCAAGAAGAGCTGCTTGCTTACATTGATCGCCAAGAAGAAGCTAAGCTACGGGTAA GTTGTCACATGTATCTTTAGAACACAATTAAAACCTTATGGACATTGTTCGAATTCTTGATATCTGTTTGCTAATCAGAA AAAGAAGTTTTGCTGGTGACTTCTGTTGCTGCTGATAGAAAGAGAGATTCTGGAGGAGGATGTTTTCCAAACCACGTTGT TTCTATGGCGAGTTGACCTTGCAGTGATGTAAAATCTGAACACTGATTTTTAATATACGGGGTAAACTTTGATAAATTGT TTCAAGCTTGTGTGTAGCTAGAATGGCTTACCTATTGCTAACGCACAAGACTTTTTTTCTCCCTAGCTTTATTGTTTTTG CTGTGACCACATTTGTTAATTGTTGTATTTGGTGTGATTAGTTGTTAATTAGTAAAGCGTTTGTTCTTCTGATCTTTCGG AACTTACATTGAATATTAATCTATTTGGGGGCATCTTATTTCAAAGGTAAACCTTAGTAAATTTGTGAGGCAAGCAAGCA GTGATAATGTAATTTCCAAAGTAAAAGTGAATGGTTGTAAACGGGTTGTGGTCCAAACTACTGAGATGTTGATTCTATTG GCATCTTTTGGTAGTTGTATGGGTGAAGAATGAAGA
CDS sequence (LotjaGi3g1v0511100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTACCTTTGCTCCGACATTCACCACCGTTGCACAATGTCCGGCCCGCTCGACCGTTTCGCCAGACCTTGCTTTGAGGG ATTCTACGGTAGTGATGAGAGAAAAGAGAGGAAGTCTGATTTTGAGAACTCTGAGGATGAAAGGAGGACCAGAATTGGAT CTCTCAAGAAGAAGGCCCTCAATGCATCTTCCAAGTTCAAGCACTCTTTGAAGAAAAAGAGCAGCAGGAGGAAAAGTGAC GGGCGGGTTAGCTCTGTTTCCATTGAGGATGTTCGGGATGTTGAGGAGTTGCAGGCTGTTGATGCCTTTCGCCAATCGTT GATTATCGATGAATTGCTTCCGGAAAGACATGATGATTACCACATCATGTTAAGATTTCTGAAAGCAAGGAAGTTTGATG TTGAAAAAGCAAAGCATATGTGGGCCGATATGCTACGATGGAGGAAGGAGTTTGGCGCCGACACTATTATGGAGGATTTT GAGTTCAAAGAATTAAGCGAAGTTGTAAAATACTATCCACATGGCCATCATGGTGTTGATAAGGAAGGAAGACCTGTTTA CATTGAAAGGCTTGGAAAAGTGGATGCAAACAAACTTATGGAAGCCACTACTATGGATAGATATGTAAAGTACCACGTAC AAGAGTTTGAGAAATCTTTTGCGATAAAGTTTCCTGCCTGCACAATTGCTGCCAAAAGGCACATAGAATCGAGCACTACG ATCTTAGATGTTCAAGGCGTGGGCCTTAAGAACTTTTCAAAGTCTGCCCGGGAACTCATGATGCGATTACAAAAAATTGA TGGCGACAATTACCCTGAGACTCTCTGCCAAATGTTTATCATAAATGCTGGCCATGGGTTTAGGTTGCTGTGGAACACTG TCAAGTCTTTTCTTGATCCTAAAACAACTTCAAAGATTCATGTTCTTGGAAACAAGTACCAAAGCAAACTGCTCGAAATA ATCGATTCCAGTGAGTTGCCAGAGTTTCTTGGAGGAACCTGTACCTGTGCAGATCAGGGAGGTTGCCTCAGATCCGATAA AGGGCCCTGGAAAAACCCTGAAATCTTGAAGATAATTCTCAGTGGTGAAGCAAGGCGGGCAAGGCAGGTAGTAAAAGTTC TAAACAGTGAAGGAAAGGTTATTGCATATGCAAAACCGCGTTGCCCAATGATAAAAGGCAGTGATACATCAACAGCTGAA TCAGGGTCTGAAACTGAAGATATAGCTTCTCCGAAAACAATGAAGAGTTACTCGCACCTTAGGTTGACCCCTGTTCGTGA GGAAGCTAAGGTTGTTGGAAAGTCAAACTATGCTGGTAGTGGCAACTTGGCAGGGTATGACGAATACATTCCGATGGTGG ACAAAGCCGTTGATGCTGGCTGGAAGAAGCAAGCATTACTCCAGATCCAGAGGTCTCATAGTACAAAAGGAACACCTCCC CTTCCTGACACTCCAAAGGCTCCAGAAGGGATTCAAGCTCGGATTTGGGTAGCCGTGACCTTTTTCTTTTTAACCCTGTG GACTCTCTTCCTCTCAGTTGCATGTCGTGTGACCAAGAAACTCCCTACAGTATCATCTACTGATTATCTGAGAACTTCAG AGCCAACTCTTGATACAACAAATAAGGAAGACTCTGGTTCTTCTTCACTGACTGCAGCACATACTGAGGCAGATCTCCTA TCCTCCATGATGAAAAGGTTAGGTGAGCTTGAAGAGAAGGTTGAAACTCTCCAATCTAAGCCATCGGAGATGCCTAATGA GAAAGAGGAATTGCTAAATGCTGCTGTCTGCCGGGTGGATGCTTTGGAAGCAGAGCTAATTGCAACTAAAAAGGCTCTCT ATGGAGCTTTAATGAGGCAAGAAGAGCTGCTTGCTTACATTGATCGCCAAGAAGAAGCTAAGCTACGGAAAAAGAAGTTT TGCTGGTGA
Protein sequence (LotjaGi3g1v0511100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYLCSDIHHRCTMSGPLDRFARPCFEGFYGSDERKERKSDFENSEDERRTRIGSLKKKALNASSKFKHSLKKKSSRRKSD GRVSSVSIEDVRDVEELQAVDAFRQSLIIDELLPERHDDYHIMLRFLKARKFDVEKAKHMWADMLRWRKEFGADTIMEDF EFKELSEVVKYYPHGHHGVDKEGRPVYIERLGKVDANKLMEATTMDRYVKYHVQEFEKSFAIKFPACTIAAKRHIESSTT ILDVQGVGLKNFSKSARELMMRLQKIDGDNYPETLCQMFIINAGHGFRLLWNTVKSFLDPKTTSKIHVLGNKYQSKLLEI IDSSELPEFLGGTCTCADQGGCLRSDKGPWKNPEILKIILSGEARRARQVVKVLNSEGKVIAYAKPRCPMIKGSDTSTAE SGSETEDIASPKTMKSYSHLRLTPVREEAKVVGKSNYAGSGNLAGYDEYIPMVDKAVDAGWKKQALLQIQRSHSTKGTPP LPDTPKAPEGIQARIWVAVTFFFLTLWTLFLSVACRVTKKLPTVSSTDYLRTSEPTLDTTNKEDSGSSSLTAAHTEADLL SSMMKRLGELEEKVETLQSKPSEMPNEKEELLNAAVCRVDALEAELIATKKALYGALMRQEELLAYIDRQEEAKLRKKKF CW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 494 | 494 | - | – | |
| PANTHER | 13 | 640 | 628 | 0.0 | – | |
| PANTHER | 13 | 640 | 628 | 0.0 | – | |
| MobiDBLite | 32 | 54 | 23 | - | – | |
| MobiDBLite | 32 | 82 | 51 | - | – | |
| Gene3D | 56 | 151 | 96 | 1.7E-15 | – | |
| MobiDBLite | 61 | 78 | 18 | - | – | |
| SUPERFAMILY | 94 | 160 | 67 | 7.85E-18 | ||
| Pfam | 115 | 143 | 29 | 1.0E-7 | ||
| SMART | 119 | 144 | 26 | 1.3E-8 | ||
| PRINTS | 122 | 144 | 23 | 2.6E-6 | – | |
| Gene3D | 152 | 372 | 221 | 2.1E-76 | ||
| CDD | 162 | 333 | 172 | 1.91799E-43 | ||
| SUPERFAMILY | 164 | 357 | 194 | 9.68E-60 | ||
| ProSiteProfiles | 164 | 338 | 175 | 26.527 | ||
| SMART | 164 | 335 | 172 | 6.1E-58 | ||
| Pfam | 168 | 333 | 166 | 6.8E-33 | ||
| PRINTS | 291 | 310 | 20 | 2.6E-6 | – | |
| PRINTS | 324 | 333 | 10 | 2.6E-6 | – | |
| TMHMM | 495 | 517 | 23 | - | – | |
| Phobius | 495 | 515 | 21 | - | – | |
| Phobius | 516 | 642 | 127 | - | – | |
| MobiDBLite | 531 | 551 | 21 | - | – | |
| Coils | 560 | 580 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0511100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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