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LotjaGi3g1v0515000.1

Overview

Field Value
Gene ID LotjaGi3g1v0515000
Transcript ID LotjaGi3g1v0515000.1
Lotus japonicus genome version Gifu v1.2
Description RING/U-box superfamily protein; TAIR: AT1G65430.1 IBR domain-containing protein; Swiss-Prot: sp|Q84RR0|ARI7_ARATH Probable E3 ubiquitin-protein ligase ARI7; TrEMBL-Plants: tr|I1LPJ5|I1LPJ5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0515000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:93213972..93223749) extracted from Lotus japonicus Gifu genome v1.2.

TGCTGAACTAGTCTCACTCCCAAGCACACTCTCTCTCTGTAACTGTCAAACCCTTGCGTGCCCTCCACGAAATCAACCAA ACGCGGTGTAACCTCTACCGCCGCCGATTCTCTCTTCTCCGACGACGACGGTCTTCACCACCCTGTCATCCTCCACGATC ACCACCACCACCACCACCACCACCACCACCACCACCACCGTACGTGATTCCGACGAAATCAGCGAAACACCACAACCTCC GTTGACCGTGCCCCAATCACAAAAACCCTAATTGTACCCCATTCCAATTCAATTCTCACCATGGATTCCATTTTCGACAT GAAATCCTTAAGCCATGGCTTAGTTTGTGGCCTGCGAGAGCGAGACAAAAATCTTCCAAACACAGAGGAGGAAGAAGAGG ATAAGCGTGAAAACTTTACAATTCTGAGTGAACTCGAGATCAAGCGACTTCAAGAGGATGCCATTAACAAGGTTGCATCG GTGCTCTGTATACCCGATGCTTCTGCTTGTTTTTTGCTCTGTCACAATCTGTGGAATGTGACCAAAGTTCTTGAATCTTG GTGTGAAGATGAAGAAAAAGTTCAGAAGGCTGCAGGGTTGTTGAACCAACCCAAGGTGGAGATTGACTGGCTGAAAGATT TGTGTCAGGTCTGTTTTCGATCGTCCGAGAAGGGTAAGATTTTGTCTGCTGGGTGTGCTCATCCATTGTGTGAAGCTTGC TGGATGGATTATATAGACACAAACATTAACAAGGGTCCTTCTAAGTGTTTGACACTTAGGTGCCCTGATCCTTCTTGTGA TGTAGCTGTGGATCGAGACATGATTCGTGAACTTGCTAGCGAGTCGAGTAAAGTGATGTATGAGCAGTTTTTGTTATGGT CTTATGTGGATAGCAAGGCGAAGATGAGGTGGTGCCCTGCGCCGGGTTGTGATTATGTTGTGTGTTATCAAGGTGATGGT GGTTGTGCTAGAGATTTGGATGTTACCTGCCTTTGTTATCACAGCTTTTGTTGGAGGTGTGGGGAAGAATCTCATAGTCC TGTGGATTGCGAAACTGCTGGTCGATGGATGAAGAAGATTGATAAGTCTACATCTGAGAATGGAAAGTGGATTCTTGCTC ATACTAAACCATGTCCTCGATGCAAGAGTCTTATTGAGAAAAACCAAGGGTTCAAGTACATGACATGTAAATGTGGTTTT CAATTTTGCTGGGTATGCTTTCATGAACAGTTGAAATGTGAAAGCAGAAGTTGCAGTCCTTTTATTCGCATGCATATTAT GGAGTTTCAAGGTACGGATGGGGAAGAAGTGGAGATAAATATGGAAAAAGATAATCCAAAAAAGTGCAATCACTACTATG AGTGTTGGGCTAGAAATGATTTTTTAAGTAAAAGTATTCTACAGAAATTGATTGACCTGGATAGAAAGTACCTGAGCATG TCACTGCAAAAGCGCGAAACTTATTTTGACTTCGTAAAAAAGGCCTGGCAACAAATAGCTGAATGTAGAAGAATACTCAA ATGGACTAATGTATATGGATACTTTCTCCCCAAGAATGAAAAGGCTAAGAAGCAGTTTTCTGAGTACATTCAAGTTGAAG CTGAGGTAGCTTTGGAAAAACTTCAGCAATGTGCAAAAGTGGAAGAAACAATGTTTCAAGACAATTATCCAGAAGAATCT CTTAATAAATTTCAGGAGAAGGTAATTCATCTGACTGATGTGACAAAGATTTATTTTGAGAATCTGTTGAGAGCTTTTGA GGATGGCCTAGATAAGGTGGAAGCAAGGAGGTCGATTAAGTAGGCGAGACCTAGTTTCACACATGATCTTTGGCAGTGTG AGGCATGTGGTCATCATACTTTGGCTTTTCTCTTGTGTGCCAGAGCAACAATTGCACACAATACTTTCCTTAGCAGGCTA GGTATTTTAGTTTCCCATTTCTTTGATTAATGTTTTGATAATGGAGTTTTATGATTTTACAGATTTGCAACCAGTACTTA TTTTCATCTGTAGCTAAACTACTTAAATTCTTGAGTTTTCTTTCATTAGTTTGTCTAATCTCAATAATCATACATATGTG GTTCTGAACATTGGTCAATGGTTGCTCTTGGCATTAACTGCCCCTCAGTAAAAGTGTTGAGATATTATGATATTAAGGGC CCATATAATCATATTTTCTCATTTCTTAATCGTAGAGATTGGGATTTTATATCTCATAAGATTTCTCTGGTGTTGTTATA TTTGGAAATTTGGTTATGACATCCTTAAGTAAAATTGGAAAATCAGTTGGTGAAAATATGTAACGAATAATGACAGTCCT CGCAAAATTTTGAAAAATTCATAATTGAAGGAATTTCCTCAAGTAGATTATGGTTTTTTTGGTGCTTAAGTAGATTATGG TTTGAGTAGCCAACAAATGATCATAAAGTTATTTATTGCAAAAAAATTGGAGACATTTTCCATTGATTCCTAAACTTCAA AACCTGTTTATATGTTTCTTGAAAAAGAGTCAATCATGAACAGAAATGCTCAAAGGATAGGTCTCATAATGCATGACTTA CTTAATGAGTCTTGGATTTACTCTGTTTAGGGCCATGGGAATATCACATACTATGTGGCTTGTCATGATGTTGATATACA ACTATCTATCTTGGTTATGCATGAAATCCAAATATATAACTGTAGACTACAATCACTAAGAAATATTTTTGATGTCTATA CCTCTAACCACTTACTTGGGAGGTAAAGGAATTATAAGAATCAGAAGTAGAGACACATGATTCCTTGAGAAGTTAAACAT TTCAAATATGTGGCTCTTTTATGGATGATTGGCGACTACCCTGTGTATACTGATAGGCCCTCAAGTGGAGATTGGGCCAC ATCACACACTGCACAAGAAGTCAGGCCCAAAGTGTGGCGGGTTTATGTTAGGAAGAGAAAGAAAGGAGAACAATAGAGAG AATATGAGCTGGAAGAGAGAGGGATGAATAGCATGAAGTTAGTTACGGGAAATACGGGATGAGGGGAGTGTGTAAGAAAG AGAGATTCCCTATATAGGCATTCTGTTAGTAAGGGAAAAGGGTATGGGATATTTTGGTTGTTAGAATTGGAGTAGAGAGC AAGTTCTCTCTATAGGAGTTTTCACTCTGGGATAGGAGCTTTAGCTTCTGTATTTGTTCCATTTCAATCAATATTACTGA GTAATCTATTTTCTGCACTCTGGTTATCTTCACTGTTGCATTGGTTCCCATCAATTTGGTCCGACCTGCCGGATACTTCG AGACGGTTACCGGTGATAGGAGAGGTTGATTTGAGTCGTGAATGCCACCGAAGAAGAAGATGGAAGCGAAAGTAGCTGCT CTGGAAAATGAGGTTGCCAGTCTTCGAACCACCCTGGTCACGATGCAGGAGCAAGCGGAGAATAATCAGGCACAATTGCT TGCACTCTTAGCCCAGAACCTGTCCAAGCAAAATCCTGAGAAGGAGGACTCAGGGAGCATTCGAAACACTACCACCCCAC TTCGATCTGAGAAGGATGCAGGAGTAACATCTTCTGTGTCGGGATGGACCAAGCTCGATGGAGGCCATTTGGACGAATTC TGGAAATCCGCCAAGAAGGTGGAGCTACCAATGTTCAATGGCGATGATCCCGCTGGTTGGATTGCTCGCGCAGAGGTGTA CTTCCACATCATGGGTACAAGCCCAGAAGTTAAGGTGAATCTAGCACATCTGTGCATGGAGGGAGCGACGATCCATTACT TCAATTCTCTGCTGCATTTGGACCCAGGATTAACCTGGGAAAAACTTACTAATGAGTTGTTGGAACATTACGGTACCGCT AACAAGGGAGATGTGTTCGAGCAGCTCTCCGATCTGCAACAGCAAGGAACCATTGAAGAGTATGTGCTGGATTTTGAGCG TCTGCTATCGCAGGCCCCAAATCTCCCAGATGAACAATATTTTGGCTATTTCATCCATGGGTTACAAGAAGATATACGGG CAAGGGTGAGGAGCATGCGAGCTCTGACCTCATTGCCTCGCTCTCGCTTGATACCGCTGGCTAAAGCGGTGGAGACGGAG CTCCATGGACCAACTCGCTCGTCGATCGGGTCGAAAGGGGGTGGAACCCGTTTGGGCTACGGGTCGGGTTCGAATGCACG ACCGGCCCACCAGACTTCTACCGGGTCAAGCCCAACGGGTAGGGATCCAAACCCAGGATGGGTTATGGTGAAGAATGACA AACCAGAACGGCGAGAGGAGAAGGGAAATTCTCGTTTGGCTCCACGAGACAGAGGGATTCGACATCTTCCCTATCAAGAA CTCTTGGATCGACGCCAGAAAGGGTTGTGTTTCAAGTGCGGAGGAAAATTCCATCCTCTTCACCAATGTCCTGATAAGCA GCTGCGCATCATGCTGCTGGAAGAAGGGGATGACGATGGTGAAGCCCCAGTGCTCGGGGCGGAGGACGCCGCCGACGACG ATGCAGCGATTGACGGTGCCTATAGTATCATGCGTTTAAGTTCTGAACCGATCCAAGCGCAGACGATGAAGCTGCGAGGA GCAATACTTGGCGTACCAATCCTCATCCTAGTGGACAGCGGAGCCACCCACAACTTTATCTCCAAGCGAGTCGTCGAATC GATGGGATGGACAGTCAGTGACACTCCAACAATGCGTATTCTGCTGGGAGATGGTAGCAAAACCACGGCCAGTGGCAAGT GTGAGCAAATTGCCGTGGGAATTGAGAATTACAAGGCTGCGGTTGATGCAATCCTCTTTGATCTCGATGGCATAGACTTG GTCCTAGGAGTGGCATGGCTAATCACACTGGGAGATGTGCTGGTCAATTGGGGAAAACAAACCATGCGTTTTCAGCAAGA GGGCACATGGTACCATTTCCAAGGCCAAGGAAGGGGGCCGAGCAATCAACTGGCTTTGCAGAGTTTCTTTGGTCAGGATG CCAAGTTGTCAGAGAGATCTTCCCCACTGGGTATTTTGAGCTCACAGTTTTCTTCGAACCAGAACAAGGAAAATGGGTTT CTTTCAGAGGAACAGGGCAAACAATTAACCTCCCTGTTAGCTCGTTTTGCTGATGTCTTCACCGAGCCAAGTGGCCTTCC TCCCAAACGGCAAAGGGAGCACCAAATCACGTTGATCGCAGGCCATGGGCCAGTAAACGTGCGACCATACAGGTACTCGC ACCATCATAAAGATGAGATTGAGAAGCAGGTGCAAGGCATGCTGCACATGGGGATCATTCGACACAGTCAAAGCTCGTTC TCCAGCCCTGTGATTCTGGTCAAGAAAAAAGACGGAACGTGGAGGATGTTTGTCGATTACCGTGAATTGAACAAGGCTAC GGTCCCAGACAAGTTCCCAATTCCAGTGATCGATGAGCTCCTCGATGAATTACATGGCGCACGTTTTTTCTCCAAATTGG ACCTGAAATCAGGTTATCACCAAGTCCTTGTGAAAGAGGATGATGTCCATAAAACTGCTTTCCGGACGCATGAGGGGCAC TACGAATATCTAGTTATGCCTTTCGGTTTAATGAACGCGCCCTCCACCTTTCAAGCGCTGATGAATGAGGTGTTCAGGGA TTTGCTCCGTCGGGGGGTCCTCGTTTTCTTCGACGATATCCTCGTATATAGCTCAGATTGGGACTCGCATTTGCACCAAT TGACTGTTGTTCTCGAGAGGCTGAGGAAACAGAGTTTGGTGGCCAACCGGAAAAAGTGTTCATTTGCCCAGGAATCAGTT GAGTATTTAGGGCATGTGGTGTCTCATAAGGGGGTAGCTATGGACCCAAGCAAGATACATAGCATTGTCAACTGGCCTAC CCCAAAGAATGTCAAGGGGGTGAGGGGTTTTTTGGGGCTTACGGGTTATTACCGCAAGTTTGTCCAAGATTACGGGAAGA TAGCACGGCCTCTAACAGAGCTGACTAAGAAGGAGGGGTTTAAGTGGAATTCCCAGACCCAACAAGCTTTTGAGGCTTTG AAGACTCGCATGACTATAGACCCTGTTTTAGCCTTACCAGATTTTTCCAAACCATTCACAATTGAGAGCGATGCATCAGG GAACGGGGTCGGGGCAATTCTGCTCCAGCAAGGCAAACCCATAGCCTATTTCAGTAAAGCTCTGAGTGAACGCAACCTCA CTAAATCAGCCTATGAAAAGGAATTAATGGCCATCGTCCTTGCTGTGCAGCACTGGCGCCCTTATTTCTTAGGAAGACAA TTCACGGTTTGCACAGATCAAAAGAGTTTGCGCCAACTCCTTCACCAGCGGATTACCACGGTAGACCAGCAAAATTGGGC TGCTAAGTTGCTGGGTTACCGCTTTGATATTGTTTACAAACCGGGACCAACAAACAAGGGAGCGGATGCTTTATCCCGTA TGTTTGGAGAAGGGGAATTTCAGTCTTTAGTGTCTGTTCCAAGCTGGATTGAAGGAGACCAATTGATTCAGGAAGTCCAC GAGGATCCCAAACTCATGTCCATTATTTCTGATTTGCAAGGTAACCCAACAAGTCGACCTGGGTACACCTACATTCAGGG GGTGCTGTACTATGCAAAGCGAATGGTAATTTCTGCGACTTCCCAGTGGATTCCCAAGCTTCTCCAAGAGTTCCACTCTA CCCCCCAAGGGGGCCATTCGGGATTCTATCGAACGTATCGAAGGTTGGCGGCAAACGTGTATTGGATTGGAATGAAAGGC ACTGTCCAGCAATACGTGAAGGAGTGTGACGTTTGCCAGCGTCAGAAATATGTGGCTACCTCACCGGGAGGTCTGCTCCA ACCATTGCCAATTCCTGAGCGAATATGGGACGAGTTGTCCATGGATTTCATTACGGGACTACCCAAGGTGAGAGGGATTA ATACTGTATTCGTGGTTGTGGACCGTCTATCCAAATACGCCCACTTCATTCCCTTGAAACACCCTTACACCGCTAAGGGG GTGGCGGAGGCGTTTGCCAAAGAGGTGGTGCGACTTCATGGTGTCCCTGTGTCTATTGTGAGTGACCGTGATCCAGTATT TGTGAGTAGTTTCTGGACTGAGCTTTTCAAGCTGCAGGGTACCCGTTTGGCCATGAGCACAACTTATCACCCCGAAACTG ACGGGCAAACGGAGGTGATCAACCGTTGCCTTGAAACGTACTTACGTTGTTTCATTGCTGATCAGCCACGCACTTGGCTT CAGTGGCTGCCGTGGGCAGAGTATTGGTACAACACAACGTACCATGTCTCGACTGGAACCACTCCATTTGAGGTGGTTTA TGGACGCGCTCCACCGACTCTGTTGCGTTTTACAATTGGGGAAACCAAGGTTGAAGCTGTGGCCCGAGAACTGCAGGACA GGGATGAGGCTTTGCGTCAATTGAAGGCTCATCTTCTCCGTGCCCAAGCGGTTATGAAATCCCAGGCTGATGCGAAACGC AAAGATAGACATTTTGAACTTGGGGAATGGGTGTTCGTGAAGTTGCGCCCGTACAGGCAGCAATCTGTAGCTCACCGGAT TAACCCCAAGCTGTCCCCTCGTTATTTTGGTCCTTTTGAGATCATTGGACGCGTTGGGGCTGTCGCATACAAACTCCGTT TGCCTGAAACTTCGAGGATCCACCCCGTGTTTCACGTCTCACTTTTGAAGAAGGCAATTGGAGACTATCAAGTGGAGAAA GAACTGCCAGAGGGCCTTGCTGGGGAAGTTTCTGCTCCCATTGAACCACACTCTATTCTGGCTACTCGCACCATTCAACA GCAAGGAGGCGCGGTTACGCAATACTTGGTTCACTGGCAAGGGAAACCCGAAGAGGAAGCAACTTGGGAAGATGAATTGA CACTTTCAAACCAATTTCCCGCTTTCAACCTTGAGGACAAGGTTGTTTCTCAAGATGGTGGGATTGATAGGCCCTCAAGT GGAGATTGGGCCACATCACACACTGCACAAGAAGTCAGGCCCAAAGTGTGGCGGGTTTATGTTAGGAAGAGAAAGAAAGG AGAACAATAGAGAGAATATGAGCTGGAAGAGAGAGGGATGAATAGCATGAAGTTAGTTACGGGAAATACGGGATGAGGGG AGTGTGTAAGAAAGAGAGATTCCCTATATAGGCATTCTGTTAGTAAGGGAAAAGGGTATGGGATATTTTGGTTGTTAGAA TTGGAGTAGAGAGCAAGTTCTCTCTATAGGAGTTTTCACTCTGGGATAGGAGCTTTAGCTTCTGTATTTGTTCCATTTCA ATCAATATTACTGAGTAATCTATTTTCTGCACTCTGGTTATCTTCACGGTTGCATTGGTTCCCATCATATACTCTGTTGT CAACCTAGAGCATTACAGAAAAATCACTACTACTGTAACTGTGATTCAGTGGAGGCTACTAAGTGTTATTCGTAGGACGG TTTCGCAACTGACACCAAGCAGAGGCGGCCGTTTTTCCTTTCAGGTGGTTTGAACCACCAGCAGATGTTTTTTAAAAAGA AAAAGAAAAGCCAAACCTATTTTCACATTCGAACTTTGCCTCACTTATTTACGCGAGCCTTAGGAAACTCTGTTTCCCTC ACTATTATGCAGCTTCTCGATTCACACCTTTGGGCATAGCAAACCACCACAATAATTTGGCCACCGCAAATCACCCTGCA AACCCTCCTTCCCCTATTCATTCGCGCAAAACCACAACAATTTTGCCACCGCACAGATAGTGTCTAGACTCTAGAAGGAG ATGGAGGTCTTGAAGGTGTCTTTGTTTCTCTCTGTATCTGGAAGGTAAGCTTCTCAATCTGAAAACCTTCACTCTACCTG TGTTTGTCGTTCCTCAATTAAGGCTTGAGCATTGAAGAGCTCCTGTGGTGAAGGTTACGACGGTGAAGTTTCCAATTTCT GAGATTGATCTACTCAATCTGGTAGCAGTTGATCAGTTAAAGCTTGGAATATCCTCATCTTATTTGGAGAGTTCATTACC TCCTGTTTCACTTTGATATATCCCTGGTAAAAATTCATTTCATGAAGTGTTCTTTACCTGTACATATCAGTACTGTGATT TATTTGCTTTCCTATATGATTAACAAATCAACTTCTGACTTCACAAATACAGAATAAGATAGAAACAATAGGATTAAATA GCAAATATAACTCATTTTTGGTTTTGATTAATTTTGGGAAAAGAAACTTACAAAATATATTCATATGTCATGTAAATTAG TGTCCAATATAAAACACTTTTCTTCTTGTTCAGATGTTCATCCATTAATGTATTTGGAATGTGTTATAGTTAACATTAAG GGATATATACGAAGGATTAGGTGAAAAAGATTTAGTTGTTTTACTAAAACACCTTTGAAGAAGCTTCCTTATATCCTCTT AGCCAGAACCAAGTTTAGCATCTCTCTATACCATGCTTGTCTGCGCTCTTCACAATAGCTCCTAGGCCGAGATATTTCAC TGATCCAGTCATAATTAGTTTCACAGTGATATTGGTCCATGGCCTCTAACTCTTCATAACTGCTTTCAGCTTAGTTCTGG TTACTTATCTCCTCTCCTTCTGCTGCATTGTCATGACTGGTTTCATCTTATTGTTGGTTTCTGGTTTCTGGTTTCTACCT TGTCTGCCTTGAGAAACCTTAAAAATTATATACTTGTTGATATTGCAGATTAGATTTTACGGTGACTTTTCAGATGAGTT GAATGCTCAATGGTATATTTTGAGGGGTAGATTTCACATTTTTTATGGACTGAATGTTGGACTTTGTATTTCCAATTTCT TATTTTGTAGACTTCACA
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0515000.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGATTCCATTTTCGACATGAAATCCTTAAGCCATGGCTTAGTTTGTGGCCTGCGAGAGCGAGACAAAAATCTTCCAAA CACAGAGGAGGAAGAAGAGGATAAGCGTGAAAACTTTACAATTCTGAGTGAACTCGAGATCAAGCGACTTCAAGAGGATG CCATTAACAAGGTTGCATCGGTGCTCTGTATACCCGATGCTTCTGCTTGTTTTTTGCTCTGTCACAATCTGTGGAATGTG ACCAAAGTTCTTGAATCTTGGTGTGAAGATGAAGAAAAAGTTCAGAAGGCTGCAGGGTTGTTGAACCAACCCAAGGTGGA GATTGACTGGCTGAAAGATTTGTGTCAGGTCTGTTTTCGATCGTCCGAGAAGGGTAAGATTTTGTCTGCTGGGTGTGCTC ATCCATTGTGTGAAGCTTGCTGGATGGATTATATAGACACAAACATTAACAAGGGTCCTTCTAAGTGTTTGACACTTAGG TGCCCTGATCCTTCTTGTGATGTAGCTGTGGATCGAGACATGATTCGTGAACTTGCTAGCGAGTCGAGTAAAGTGATGTA TGAGCAGTTTTTGTTATGGTCTTATGTGGATAGCAAGGCGAAGATGAGGTGGTGCCCTGCGCCGGGTTGTGATTATGTTG TGTGTTATCAAGGTGATGGTGGTTGTGCTAGAGATTTGGATGTTACCTGCCTTTGTTATCACAGCTTTTGTTGGAGGTGT GGGGAAGAATCTCATAGTCCTGTGGATTGCGAAACTGCTGGTCGATGGATGAAGAAGATTGATAAGTCTACATCTGAGAA TGGAAAGTGGATTCTTGCTCATACTAAACCATGTCCTCGATGCAAGAGTCTTATTGAGAAAAACCAAGGGTTCAAGTACA TGACATGTAAATGTGGTTTTCAATTTTGCTGGGTATGCTTTCATGAACAGTTGAAATGTGAAAGCAGAAGTTGCAGTCCT TTTATTCGCATGCATATTATGGAGTTTCAAGGTACGGATGGGGAAGAAGTGGAGATAAATATGGAAAAAGATAATCCAAA AAAGTGCAATCACTACTATGAGTGTTGGGCTAGAAATGATTTTTTAAGTAAAAGTATTCTACAGAAATTGATTGACCTGG ATAGAAAGTACCTGAGCATGTCACTGCAAAAGCGCGAAACTTATTTTGACTTCGTAAAAAAGGCCTGGCAACAAATAGCT GAATGTAGAAGAATACTCAAATGGACTAATGTATATGGATACTTTCTCCCCAAGAATGAAAAGGCTAAGAAGCAGTTTTC TGAGTACATTCAAGTTGAAGCTGAGGTAGCTTTGGAAAAACTTCAGCAATGTGCAAAAGTGGAAGAAACAATGTTTCAAG ACAATTATCCAGAAGAATCTCTTAATAAATTTCAGGAGAAGGTAATTCATCTGACTGATGTGACAAAGATTTATTTTGAG AATCTGTTGAGAGCTTTTGAGGATGGCCTAGATAAGGTGGAAGCAAGGAGGTCGATTAAGTAG
Download CDS Sequence

Protein sequence (LotjaGi3g1v0515000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MDSIFDMKSLSHGLVCGLRERDKNLPNTEEEEEDKRENFTILSELEIKRLQEDAINKVASVLCIPDASACFLLCHNLWNV TKVLESWCEDEEKVQKAAGLLNQPKVEIDWLKDLCQVCFRSSEKGKILSAGCAHPLCEACWMDYIDTNINKGPSKCLTLR CPDPSCDVAVDRDMIRELASESSKVMYEQFLLWSYVDSKAKMRWCPAPGCDYVVCYQGDGGCARDLDVTCLCYHSFCWRC GEESHSPVDCETAGRWMKKIDKSTSENGKWILAHTKPCPRCKSLIEKNQGFKYMTCKCGFQFCWVCFHEQLKCESRSCSP FIRMHIMEFQGTDGEEVEINMEKDNPKKCNHYYECWARNDFLSKSILQKLIDLDRKYLSMSLQKRETYFDFVKKAWQQIA ECRRILKWTNVYGYFLPKNEKAKKQFSEYIQVEAEVALEKLQQCAKVEETMFQDNYPEESLNKFQEKVIHLTDVTKIYFE NLLRAFEDGLDKVEARRSIK
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11685
38 495 458 1.3E-108
IPR031127
PANTHER
PTHR11685:SF259
38 495 458 1.3E-108 –
ProSiteProfiles
PS51873
111 322 212 36.218 –
Gene3D
G3DSA:3.30.40.10
112 199 88 1.1E-13
IPR013083
SUPERFAMILY
SSF57850
114 194 81 4.74E-12 –
SMART
SM00647
185 250 66 3.9E-21
IPR002867
Pfam
PF01485
186 250 65 3.4E-14
IPR002867
SUPERFAMILY
SSF57850
187 256 70 7.42E-10 –
ProSiteProfiles
PS50158
237 250 14 8.581
IPR001878
Gene3D
G3DSA:1.20.120.1750
246 493 248 6.0E-46 –
SMART
SM00647
254 313 60 0.037
IPR002867
SUPERFAMILY
SSF57850
270 314 45 9.18E-13 –
Pfam
PF01485
274 313 40 2.0E-6
IPR002867

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003676
Molecular function Nucleic acid binding Interacting selectively and non-covalently with any nucleic acid.
Subterm of
GO:0004842
Molecular function Ubiquitin-protein transferase activity Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
Subterm of
GO:0008270
Molecular function Zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
Subterm of
GO:0016567
Biological process Protein ubiquitination The process in which one or more ubiquitin groups are added to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0515000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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