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LotjaGi3g1v0544200.1

Overview

Field Value
Gene ID LotjaGi3g1v0544200
Transcript ID LotjaGi3g1v0544200.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description DNA topoisomerase 1; TAIR: AT5G55310.1 DNA topoisomerase 1 beta; Swiss-Prot: sp|Q9FJ79|TOP1B_ARATH DNA topoisomerase 1 beta; TrEMBL-Plants: tr|I1LP26|I1LP26_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0544200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:96027485..96035795) extracted from Lotus japonicus Gifu genome v1.2.

ACCAAAGTGTCCCCAATCCTTGACATGTGATTCCCAAATTAATTGGCCTGACCCGAGTTAAACTCGCCCTAACTCGCTCC TTTGGTTGTATGTATCTGTGAGCTACCACCCTTGCCTTCTTCTTCTTCTTCTCCCCCAAAAATCCCTATCTCATCTCATC TCATCTCATCCACTCTCAGCTGCAACCATTCTCATCGTTCGGTAATCAATCGCTCCCTTCATATTCTTCTTCTTCTTCGC TATTTCTTTCTTTCTTTCTGCAATCACTTCTCTTAGCTGCTTCTATCAATTTCATATTCAATTTCTCCTTTTTCGGTATA TAATGTTTTCGATTTTCTTGTGTTCTGCATTTCCCCCCTTTCCCCCTTTCACCTCGTTCTTCCATGCATTTTTTTCTGTA ATTTTTTCAATTTTTATTATTGCTGTTATCGTCTGTCTTCAGATAACAACACCATCATAGGTTTAAACCGTTAAAAATAT GATTTTGTTTTGTGGGTGTTGAATTTCCATTCACATTAGAGTCTCACTCTTGATGGGTTCTGTTTAATTTTAGATTAACA TGTTTTACTTGTACCTTGTTCACTTTAATCGCGCTTGTCATAGAGATTATGCTTTTAAGAGCTTCGTGTTATGAATTCAT GATTGAAAGTATGTATTTTTATTTATTTATGCATATGTTGATGTTTGGCAAAAAAAGTTCCTGTACAAGAGTAAATATGA ATAATGGAGCGTTCTTCTTGATTTGGTAGGGAAGCTTATATTATCATCATGAATATTTATGGTTAGTTTTAATTTAGTTA TTGCCAACAATTTAGATTGAAAGTGAGGGGGATGGGTTTTCATACTTTCAACTGACTGCAGGATTTCAATAATATTTGCT TTAGAATGGATGATGTTGTTTTCCTTTTTCTTGTAAGTTGTCTTTGAAACCTTCTGCTCTGCCTTACAGTGTTGTTACTG TTGCATGAATGATATTTTTTTCGTGTTGTCATTTTAAGTTTGCTTAGAACTGTGATACTTGATGATCGGTAATTCGGTAT ATTAATTTCTTAATGGAAGACTTTTTTTTATATCCAGAATTGCATGTGATGCACTTGCCTGCACTTGCCATAGTTGAATA ATGGCTGTGGAGGCTTCTGACAAACCAAATCTGCCAGATAATTTTGACGATGAACCATTAGTTTTCAAAAGGTATAAGAG CAAGAAAAGTCAATTGAATTCAGAAGTAAGGAAGTCAACTTCTCAAAGCCATGATGGACCGTCATATAGACAGAATTCTG ATGGGCCTTCTTCAAATGGAAAAACTTCTAGCATGCAGAAAGGTAATATTGTCCCGTCTGCTAAGGTAACACCACCCGTG AAGGCTTCTGTAGGTATCTCAAAAGCATCTAATTCACTTGGCAACGCCTCATCTGCTAAGTTGCCTCTGGCAAATTCAAA GTTAGTTTCATCGAGGGATAAACCTAAGACTCTTTCAGAACAGAAAATGTCCATTAATGTTAAGGAGGAAAAAAATATCA AAAATTGTTCTAAAGATGAAGATTCAGAGGACGATGATGATCATAAACCATTGAGTGCTAGGTTGAAGGTGAACTCTCAC CACGACAACAAAACGTCCCCTGTTGTTGTCAAGAAGTCTTCTGAAGACTCTGAAGATGATGATGATGATATCCCTTTGTC AGTAAAGATAAACCGTAATTCTAATTTGGCAACATCCAGCAGTAACTATGATGATTCTGATAAGAAGCCTATTTCAAAAG TTCAGAAAGAGCGTCAAAATGGTTCTGGCATAACTATTAAACAGGAAAGGGCATCTACACTACCAGTTAAGAGACCTATT GATAACAGTAACTCCTTGAACTCTTCGATGAAGAAGCCAAAGGTTTCAGATTCAGCTGCATCAACCAAAGCTAAGCAAGT CTCTGGAAAAAGCCAGCCGAAGATAGAAGATGACGATGATGATGATGTTCCTATTTCCCAGAGAATAAAGAATTCGGCCA AATCAGCTGCTAAATCAGTTTCCATAAAGAAGACAGTGACAAAGGCTACTAAAGTTAATAAGTCTGGCACAACATCTTTT AAGAAACAGGCCAAGTTCAAGTCAAAAAAATCAGGCAGTGGTTCAGAATATTCCAAAGCTTCAAAACTTCTTCCTAGCTC TGGTGATGGGCAGAAAAAATGGACAACATTGGTTCACAATGGTGTCATTTTCCCTCCTCCTTACCAGCCCCATAGGGTAA AGATGCTCTATAAGGGGAAACCAGTTGACTTGACTGCTGACCAAGAGGAGGTCAGATTCTATCTATGCAAACTTTGCTCT TATTCCTTTTGTCAATGAATTGCAGTCAATTAAGTACTTTTATGCAAAAAATTCTCAACTTCTAAAGTCTATTTGCTTTG AGCTTTGACAGTATTATGAGCTTCAAATTTATTTTGTAGGTTGCTACAATGTATGCGGTCATGCGAGATACAGATTACAT GCTGAAAGATAAGTTCAAGGAAAATTTCTGGAACGACTGGCGAAAGTTGCTAGGAAAAAATCATGTAATTCAGAACTTAA AGGATTGTGACTTTACCCCGATCTATGACTGGTGCCAAACTGAAAAGGAAAAGAAGAAACAAATGACTACAGAAGTAAGT CGATAACTTGGTATACATAATTTCATTTCATAATAGTAGAGGTTGATATTTCTGAGCATGATTTGCTTTTTTAAGTTCGT ATAGGTTTGCAGAGATTTATTGAAATGAGATAGGACAATAGAATTCCCACTACAGGAAAAATAGAATTCATACATGGCAA AATGAAGGCAGAACAGAATTCTGTTAATAAGAACTGAAAGAAAGGAGTGGGGTGTGAAGGAGGTAGATAGAAATTTAGTA GGAAGTTTTGGGAGGTTTCTAGACTCTTAGAGGTGCAGCATTTTTTCGTTCTCTGTATTTCTTTCTTACCTTTCAGTTTT TGGGATAGTTATCTCTAGTTTTCCCTTCCAGTATTTAGAGAGTTTTTTTTTATGTAATTAGTTCTCCCAGGGCTGATGGT GATCATGTTATTACTCAAGGAAAGTAGAGTGTTTTACTAAAATTGAATATTATATACCTAGTCTGATTTCTATTTCTTGT CAGTATGGATGTCAAATGTGCCAAATATGTACCTAGTTAACCTTAGTGCTCGTAATTCATGTCTTATACTATTATTTCAA GTATTGACCCTTTTGTGTCTTCTCTTTATTCAGGAGAAGAAGGCTCTGAAGGAAGAGAAAACAAAGCAAGAGGAGAAATA CACGTGGGCTATTGTGGATGGTGTTAAAGAGAAGGTTTAATCTTGCCTTTCACTCTTTCAAATTCATAATGGGAGTTGTT ATGCACTGATGAAGTTGCACTTGTATCTCCTATATAATTGTGACATTTCTCTGTTGAAATTTAATCTTTAGATATATCTT CATGACGCCAGCTGTTATTTTGAATTTAACCATTAAGAAACACTTTAACTGATGACTAACTTTTATTAAATCTTCATTTT AGGTTGGAAATTTTAGAGTTGAACCACCAGGATTGTTCCGAGGCCGTGGAGAGCATCCCAAGGTTGTTATGATAGATGTT ACTACCGGAACTAAGATACATGCGCATTTTTCAGATATAATGATTTCATAAATACTATCTTCATTCTCAGAGTTTTGTCT GGCTTCTACAGTTAATACCGTTTACTTATTTCTGCAATTTATGTTATTAGATGGGAAAATTGAAAAGACGCATTCGTCCT AGTGATATCGTAATTAATATTGGAAAGGATGCACCAATTCCTGAATGTCCTATTCCTGGTGAAAGGTATTACTCTTCCAA ATCTATTTGGAGAATTTTTTTGAAGAGCAAATTGATATTGTATATTCTGCCAAGTTCAGAACCTTTTATTTGTTTGAATC ACTGAGCTGTGTAACCATTGCAGGTGGAAGGAGATAAGACATGACAATACAGTTACATGGTTAGCCTTCTGGAATGATCC GATCAATCCAAAGTTGTTCAAGTATGTGTTTCTGGCAGCTAGTAGTTCCTTGAAGGGCCAAAGTGACAAGGAAAAGTATG AGAAAGCTAGGATGTTGAAGGTGCTTTTATGCTTTGTTTGTTAGCTTGTTACAAATTCCATATTTTTCCCATGATATTTT TGGATTGCAGTTAAAAGAACCATTTTAATTACCGTAGTTCTTGACATCTGGGTGCAGGATTATATAGGGAACATTAGAGC GGCATACACGAAAGATTTTACAAGTAAAGATATTACGAAGCAGCAAATAGCTGTTGCTACTTATCTTATTGATAAACTAG CTCTGAGGGCTGGCAATGAGAAGGTATTACGTCTGTGTATGTACTTTCTTACTCTCATTTGCGGTATCCTCTTCCCTAAA AGATGGACACATACACGAGGTCAAGACACACACAAATGTACACATTGTTAGAAAAATGTATTATATCTTTTAAGTAAATT TGACTGGTAAGGACTTGGTGCATGTTTGGATACATGGTAGATTGTCTCGTTGGAACTTTGAATGGGAATTGATTCTGGGA GAAGCTACTTTTAGTAGCTTTTGTGGGAGCAGAATTGATTATAGAAGAATTAAATGTGAATCCAAACACACTATAACTAG GTTGCAGAGATTAATAAGTTTTAAAGAGAAACTAATCATTTGCTACTTTCTCCTTTATATTTTGCTTTTGCGATCATAGT TTAAAGAACTATATAAGATGTTTCCAAGACAATGGAAAACAGCCTGAACTAGGTTGTAGTCGTAGATGACATCATCATGA CTTATGATTAGAATTTCCTGAAGGAACTATTTGCTGGTATTGATTCCTTTTTAGTGAATGTCCTGGAGATATTGTTTATT TCTTGCTGCAACTACTTTATGTGAAAATTTGTTTTAAAAGTATTTATGGATGATCAAACTGTGTTAATAATATATAACAC TTTCAATGGTTGAGCCTATCGAATCATTCAATAAAAGTATAGCATTCTTTGAGTTTATTATAAGCTTTCCTAACATGCTT GAATGTCTTTTATCTTCAGACAATTACTTTGATTTTTAATGATTAAATTTAGTCATTTCTCAATGGCATTTGCTTAGGAT GATGATGAAGCTGATACTGTTGGTTGCTGCACATTAAAAGTGGAGAATGTGACAAGAGAAGCCCCCAACAAGTTGAAGGT ATTGGTGTTTCTAATTATTTTCACTAATTTTTTTGGTTGGGTTGATTGGTTTTAGGTCTTAGTTTAATAAGTCCTCTCTT ATATTGTTCCAACAATAGCTGTCTAGTTGCTCCTGTACCATTTATACTTATTAGTGAACTTGTTTCCTTTCTGTTACAAT GCAGTTTAACTTCCTTGGTAAAGATTCAATCAAGTATGAAAATACAGTTGAGGTCGAGCTTCCTGTTTACAATGCAATAT TGAAGTTCCAAAAAGGTGGGAAACCTTTTATTTTGATCTTCAATTGTTTTTATGTTTCTCGTCTGCAGCGTGTAAGTGTT TTCCTCCCTTAATTTTCAGATAAAAAGGGTGGTGATGATCTTTTTGACATGTTGGATACAAGTAAATTAAATGCACATCT GAAGGAACTCATGCCTGGTCTAACAGCAAAAGTCTTCCGTACATTCAATGCATCTATCACATTGGATGATATGGTAAAAA TAGATTTAGCTTAAACAATCCTGAAATTCACATTCCTTGGAAAAGAAAAAAGAAAAGGATTATTTCCTAGGTCTTTTTCT TTTGTTCTTTTATATACTGTCAGTGTAAACTGTTAATGCTTTGTATGTTGAATGTGGTTGACATGGCAACACCAAATTTA AGAAAGTGTACCTTAGTTAGATTTGAAATATTCAATATCATCAAATTTAGGATTGGAGTCATATATAGTGTTCATACCCA TGATTCAACTGTTCTATTAGAATTAAATATTCCAAATGCACATTTGTTTGTGCAACATTAGATCTACCTTTGTATCTGTG TAGGGTTATTTAAAACTTTTGTACACATATCCATGTACAATATAATGACAGCACAAATGCAATATTGTTACTTGCCTCTA TATTGTTATGCTCCCCTGAAACGCTTTGATAAATCCTTTATTTTATCGGGTCATATATTATATAGACTTGTATATTTATT TTTCCTGGACTTGTGTAATAACAGTTGAATAAGGACACTAAAGATGGAGATGTTGGGGAAAAGATTGTTGTTTATCAGCA TGCAAATAAACAGGTAATTGGCTTTAATTATTGCTTTATTATACCTACCATATTGCATTCTGGCATTTTAATTGTTTGTG TTCAAGTTGTAACAACTTGCCTTTTCCATAACAGGTTGCAATCATTTGTAATCATCAACGTAGCGTTTCAAAATCTCACG ATACACAAATGACAAGGTTAAATGAAAAGCTTGATGAACTTCAGGTAACGAGAATATCTGAAAATTGTTAACCTTGGGTT GGATGATTGAATTTAGAGTTGATTTGGTTTTTAAGACCTTTTAACATATTATTGGAGGTGGCTTAATCTTTTGGTTGTAG GCTGTTCTGAAGGAGCTAAGAACGGATTTGGACAGGGCTAGGAAAGGAAAGCCCCCTTCAAAGAGTCCAGATGGAAAGAA GAAGAAGAACTTGTCTTCCGAAGCGTAACTTATCTTTCTTAACTTCCTTTTACCATTTCATGTTTAAAGGTGATGTATGA TTGTGGTTTATGCAATATACAGGCTAGAGAAAAAGATATCTCAAACCAATGCAAAGATTGAGAAAATGCAGCGTGATATG AAGACAAAAGAAGATCTCAAAACTGTGGCATTAGGCACATCCAAGATAAACTACCTTGATCCCAGGATTACAGTCGCCTG GTGCAAGAGACACGAGGTTCCTATTGAAAAGGTGTTGGCTTCTTCACTTTTTAGATTAAAGTGATTGGTATTCTGTGAAG TTACAATCTTTTTTTGGATTATGTCTGCTTATCTTGAACCGAGAAAAACAAACAAATAAAAGTATCAAGGATTGGAGAGC ATGAGGTCCAGGACTCTCTGTGTACTTCCTTACTGATGGGTGTGCATTTGGGTAGATAGCTTAGTGGCAGTAAGCACCTA TCACCTAAGTATTATTCATAAGCTCAAAACATCTTATAGGTAGATATAGGGTGTGTTTGGGTTACAGGTTAATTAAACCT TATTGCATAAGCACTTATTCATAAGCTAATTTGATAAGCTTATAGAAATAAGCTCAAATAAGTTATACGTAGGTATAAGA GCTTGTTCAAAACATCTTATACATACGTCATAAGCTATTTACATAAGTTCTCCAAAATACTTGCATAAGCACTTATGCTA TGAGATTAGTTATAACAAGCTCTTCCGAACGGACACATAAGCACTTATTCATAAAAATAACCTCAAAACAGCTTATAGGT ATGCCATAAGCTATTTTCATAAGCTTATCCAAACATTTGCTTAAGATTAGCTCAAATAAGCTCTTCCAGCCTAAGTATAT GTGCCTGGAGCAGTAACTTCATAGGATTGGGCTGGATACTGCATATTCATTCTTGCTCTCATGTGTGGTCAAACTGACAT AGCTTTGATCTGATGCTTGATTAGCTGCATCTCTTTTTGTTACTAATCTGTTGCACTTAATTACCTGGGATTTCAGATTT TCAACAAGTCTCTGCTGGCAAAGTTCACTTGGGCTATGGATGTGGACCCTGACTTCAGATTCTGAGATCTGTAGAATGGA GGCATAAAACATTTCTTTTTTTACTCATTTCTTTTTTTATAATTTTTTTTTCCCTGTTTTGTTGAGTCTAGCGGAAATCT GACGTTGTAAGTTCATCTAATCTAATTATGGGGGTGAGTTGCCCCTTCCCCATTTACCTGTTTTCTGCTTAAACATTCAA CAATTCATAAATATGATATTAATGTGATACCCATTGCCAAATGTGGAAAATGAGGTGAAGTTTTTTTAGTTTCATTTTAT TTCGTTGTTATCATGTGATTTTGTTTACATTATATTTTTTTAATTAATTAAAACCTGATGAACATTGTTCACATCACGTG TATACAAGTGTCATAAGGTTGTAGTTGCGGAGCCACCTAGGGTTGTCACAAACACTTGCTAACCATGGACCTTGGGTTTG CCAATTCAATGAGATTGTAAATTTTTTTAATGTTCAAATGTGCACCATCATATTTAATCGTCGAAGTATAACTGAAACTT TATAAAAAAAATACAGAAATCAGTTAATTAACTTTTTGATCTATTATTTTCCTTTTAGTTTTGTTTATTAG
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0544200.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCTGTGGAGGCTTCTGACAAACCAAATCTGCCAGATAATTTTGACGATGAACCATTAGTTTTCAAAAGGTATAAGAG CAAGAAAAGTCAATTGAATTCAGAAGTAAGGAAGTCAACTTCTCAAAGCCATGATGGACCGTCATATAGACAGAATTCTG ATGGGCCTTCTTCAAATGGAAAAACTTCTAGCATGCAGAAAGGTAATATTGTCCCGTCTGCTAAGGTAACACCACCCGTG AAGGCTTCTGTAGGTATCTCAAAAGCATCTAATTCACTTGGCAACGCCTCATCTGCTAAGTTGCCTCTGGCAAATTCAAA GTTAGTTTCATCGAGGGATAAACCTAAGACTCTTTCAGAACAGAAAATGTCCATTAATGTTAAGGAGGAAAAAAATATCA AAAATTGTTCTAAAGATGAAGATTCAGAGGACGATGATGATCATAAACCATTGAGTGCTAGGTTGAAGGTGAACTCTCAC CACGACAACAAAACGTCCCCTGTTGTTGTCAAGAAGTCTTCTGAAGACTCTGAAGATGATGATGATGATATCCCTTTGTC AGTAAAGATAAACCGTAATTCTAATTTGGCAACATCCAGCAGTAACTATGATGATTCTGATAAGAAGCCTATTTCAAAAG TTCAGAAAGAGCGTCAAAATGGTTCTGGCATAACTATTAAACAGGAAAGGGCATCTACACTACCAGTTAAGAGACCTATT GATAACAGTAACTCCTTGAACTCTTCGATGAAGAAGCCAAAGGTTTCAGATTCAGCTGCATCAACCAAAGCTAAGCAAGT CTCTGGAAAAAGCCAGCCGAAGATAGAAGATGACGATGATGATGATGTTCCTATTTCCCAGAGAATAAAGAATTCGGCCA AATCAGCTGCTAAATCAGTTTCCATAAAGAAGACAGTGACAAAGGCTACTAAAGTTAATAAGTCTGGCACAACATCTTTT AAGAAACAGGCCAAGTTCAAGTCAAAAAAATCAGGCAGTGGTTCAGAATATTCCAAAGCTTCAAAACTTCTTCCTAGCTC TGGTGATGGGCAGAAAAAATGGACAACATTGGTTCACAATGGTGTCATTTTCCCTCCTCCTTACCAGCCCCATAGGGTAA AGATGCTCTATAAGGGGAAACCAGTTGACTTGACTGCTGACCAAGAGGAGGTTGCTACAATGTATGCGGTCATGCGAGAT ACAGATTACATGCTGAAAGATAAGTTCAAGGAAAATTTCTGGAACGACTGGCGAAAGTTGCTAGGAAAAAATCATGTAAT TCAGAACTTAAAGGATTGTGACTTTACCCCGATCTATGACTGGTGCCAAACTGAAAAGGAAAAGAAGAAACAAATGACTA CAGAAGAGAAGAAGGCTCTGAAGGAAGAGAAAACAAAGCAAGAGGAGAAATACACGTGGGCTATTGTGGATGGTGTTAAA GAGAAGGTTGGAAATTTTAGAGTTGAACCACCAGGATTGTTCCGAGGCCGTGGAGAGCATCCCAAGATGGGAAAATTGAA AAGACGCATTCGTCCTAGTGATATCGTAATTAATATTGGAAAGGATGCACCAATTCCTGAATGTCCTATTCCTGGTGAAA GGTGGAAGGAGATAAGACATGACAATACAGTTACATGGTTAGCCTTCTGGAATGATCCGATCAATCCAAAGTTGTTCAAG TATGTGTTTCTGGCAGCTAGTAGTTCCTTGAAGGGCCAAAGTGACAAGGAAAAGTATGAGAAAGCTAGGATGTTGAAGGA TTATATAGGGAACATTAGAGCGGCATACACGAAAGATTTTACAAGTAAAGATATTACGAAGCAGCAAATAGCTGTTGCTA CTTATCTTATTGATAAACTAGCTCTGAGGGCTGGCAATGAGAAGGATGATGATGAAGCTGATACTGTTGGTTGCTGCACA TTAAAAGTGGAGAATGTGACAAGAGAAGCCCCCAACAAGTTGAAGTTTAACTTCCTTGGTAAAGATTCAATCAAGTATGA AAATACAGTTGAGGTCGAGCTTCCTGTTTACAATGCAATATTGAAGTTCCAAAAAGATAAAAAGGGTGGTGATGATCTTT TTGACATGTTGGATACAAGTAAATTAAATGCACATCTGAAGGAACTCATGCCTGGTCTAACAGCAAAAGTCTTCCGTACA TTCAATGCATCTATCACATTGGATGATATGTTGAATAAGGACACTAAAGATGGAGATGTTGGGGAAAAGATTGTTGTTTA TCAGCATGCAAATAAACAGGTTGCAATCATTTGTAATCATCAACGTAGCGTTTCAAAATCTCACGATACACAAATGACAA GGTTAAATGAAAAGCTTGATGAACTTCAGGCTGTTCTGAAGGAGCTAAGAACGGATTTGGACAGGGCTAGGAAAGGAAAG CCCCCTTCAAAGAGTCCAGATGGAAAGAAGAAGAAGAACTTGTCTTCCGAAGCGCTAGAGAAAAAGATATCTCAAACCAA TGCAAAGATTGAGAAAATGCAGCGTGATATGAAGACAAAAGAAGATCTCAAAACTGTGGCATTAGGCACATCCAAGATAA ACTACCTTGATCCCAGGATTACAGTCGCCTGGTGCAAGAGACACGAGGTTCCTATTGAAAAGATTTTCAACAAGTCTCTG CTGGCAAAGTTCACTTGGGCTATGGATGTGGACCCTGACTTCAGATTCTGA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0544200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAVEASDKPNLPDNFDDEPLVFKRYKSKKSQLNSEVRKSTSQSHDGPSYRQNSDGPSSNGKTSSMQKGNIVPSAKVTPPV KASVGISKASNSLGNASSAKLPLANSKLVSSRDKPKTLSEQKMSINVKEEKNIKNCSKDEDSEDDDDHKPLSARLKVNSH HDNKTSPVVVKKSSEDSEDDDDDIPLSVKINRNSNLATSSSNYDDSDKKPISKVQKERQNGSGITIKQERASTLPVKRPI DNSNSLNSSMKKPKVSDSAASTKAKQVSGKSQPKIEDDDDDDVPISQRIKNSAKSAAKSVSIKKTVTKATKVNKSGTTSF KKQAKFKSKKSGSGSEYSKASKLLPSSGDGQKKWTTLVHNGVIFPPPYQPHRVKMLYKGKPVDLTADQEEVATMYAVMRD TDYMLKDKFKENFWNDWRKLLGKNHVIQNLKDCDFTPIYDWCQTEKEKKKQMTTEEKKALKEEKTKQEEKYTWAIVDGVK EKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDIVINIGKDAPIPECPIPGERWKEIRHDNTVTWLAFWNDPINPKLFK YVFLAASSSLKGQSDKEKYEKARMLKDYIGNIRAAYTKDFTSKDITKQQIAVATYLIDKLALRAGNEKDDDEADTVGCCT LKVENVTREAPNKLKFNFLGKDSIKYENTVEVELPVYNAILKFQKDKKGGDDLFDMLDTSKLNAHLKELMPGLTAKVFRT FNASITLDDMLNKDTKDGDVGEKIVVYQHANKQVAIICNHQRSVSKSHDTQMTRLNEKLDELQAVLKELRTDLDRARKGK PPSKSPDGKKKKNLSSEALEKKISQTNAKIEKMQRDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSL LAKFTWAMDVDPDFRF
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 285 285 - –
MobiDBLite
mobidb-lite
10 33 24 - –
MobiDBLite
mobidb-lite
34 71 38 - –
MobiDBLite
mobidb-lite
84 105 22 - –
MobiDBLite
mobidb-lite
113 175 63 - –
MobiDBLite
mobidb-lite
188 205 18 - –
PANTHER
PTHR10290:SF16
236 896 661 0.0 –
PANTHER
PTHR10290
236 896 661 0.0 –
MobiDBLite
mobidb-lite
237 269 33 - –
MobiDBLite
mobidb-lite
270 285 16 - –
MobiDBLite
mobidb-lite
307 322 16 - –
MobiDBLite
mobidb-lite
307 350 44 - –
MobiDBLite
mobidb-lite
330 350 21 - –
SUPERFAMILY
SSF56741
348 565 218 2.35E-99
IPR036202
Gene3D
G3DSA:2.170.11.10
350 564 215 3.8E-97
IPR013030
Pfam
PF02919
353 564 212 1.6E-95
IPR008336
CDD
cd00660
353 565 213 4.45372E-115 –
Gene3D
G3DSA:1.10.10.41
369 452 84 3.8E-97
IPR013034
Coils
Coil
443 470 28 - –
SMART
SM00435
493 869 377 1.9E-265
IPR013499
PRINTS
PR00416
493 502 10 2.2E-46
IPR001631
Pfam
PF01028
567 791 225 1.1E-90
IPR013500
Gene3D
G3DSA:3.90.15.10
567 715 149 2.5E-58
IPR014711
SUPERFAMILY
SSF56349
567 893 327 3.3E-86
IPR011010
CDD
cd00659
573 766 194 3.19026E-77
IPR013500
PRINTS
PR00416
609 628 20 2.2E-46
IPR001631
PRINTS
PR00416
632 646 15 2.2E-46
IPR001631
PRINTS
PR00416
654 670 17 2.2E-46
IPR001631
PRINTS
PR00416
712 726 15 2.2E-46
IPR001631
Gene3D
G3DSA:1.10.132.10
716 896 181 7.1E-70
IPR014727
Coils
Coil
765 799 35 - –
MobiDBLite
mobidb-lite
791 817 27 - –
Coils
Coil
816 843 28 - –
Pfam
PF14370
828 896 69 1.1E-35
IPR025834
ProSitePatterns
PS00176
842 860 19 -
IPR018521
PRINTS
PR00416
849 860 12 2.2E-46
IPR001631

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003677
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Subterm of
GO:0003917
Molecular function DNA topoisomerase type I activity Catalysis of a DNA topological transformation by transiently cleaving one DNA strand at a time to allow passage of another strand; changes the linking number by +1 per catalytic cycle.
Subterm of
GO:0005694
Cellular component Chromosome A structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information.
Subterm of
GO:0006265
Biological process DNA topological change The process in which a transformation is induced in the topological structure of a double-stranded DNA helix, resulting in a change in linking number.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0544200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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