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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0546200 |
| Transcript ID | LotjaGi3g1v0546200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calcium-transporting ATPase; TAIR: AT3G57330.1 autoinhibited Ca2+-ATPase 11; Swiss-Prot: sp|Q9M2L4|ACA11_ARATH Putative calcium-transporting ATPase 11, plasma membrane-type; TrEMBL-Plants: tr|G7JUR7|G7JUR7_MEDTR Calcium-transporting ATPase; Found in the gene: LotjaGi3g1v0546200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:96238700..96242231) extracted from Lotus japonicus Gifu genome v1.2.
TTCTTTTCATTCTCATTCACAGCTGGGAGCCAAGTTAGTGGTGGCTACATGCTCTCCAAAGAGGTCCATGAAGCAGGTTT CCGAATCGAGCCAGATGAATTAGCCTCCATTGTTCGGTCCCACGACACAAAATCTTTGGAACACCATAAGGGAGTTGAAG GATTAGCAGAAGCTCTCCGTGTGTCATTGCAAGACGGCATCAGTTCACACGATGTAGAACACAGACAGAAAACCTATGGT TTTAACCGCTTTACGGAGAAGCCCTCCAGAAGTTTTTGGATGTTCGTTTGGGATGCAATGCAAGATTTAACTCTAATTAT CCTCATGGTATGTGCTGTGGTTTCAGTAGGTGTTGGAATCTCAACTGAAGGTTGGCCAAAAGGTATTGCTAGATTTGAGT GATGTGAGACTTTTCTCTTTCTAGCTATAACAACCTAGTTAATCATGATAAATTCTTAGTAATGATGTCATAGTATTTCT TGACTGAGTTTCTCTATGCCCAATGGCATCCTAAATTCACGCCGTCAATGAATCTGATCTTAATGAATGACTTAGATAAC TTGAATGCGTGAACTCAAATCATGTTTTCTCCCATATTCTTGTAACCATGTTGTCTTCATGTCCTCTCTTTTATTAACAG GTATGTATGATGGAGTGGGAATCATACTGTGTATTCTTTTAGTGGTCTTTGTCACTTCAATCAGTGACTACAAACAGTCT TTACAATTCAAGGATTTGGATAAAGAAAAGAAAAATGTCAGCATTCAAGTTACAAGAGATAGTAGGAGGCAAAAGGTTTC AATTTATGATCTAGTGGTAGGAGATGTGGTTCATCTCTCAATTGGAGACATAGTTCCTGCAGATGGTTTATTCATATCAG GGTTTAGCTTATTGATTGATGAGTCAAGTTTATCAGGTGAGAGTGAGGCTGTGAATGCTGATCAACAGAAGCCTTTTCTT CTATCTGGAACCACAGTGCAAGATGGCTCTGCTAAAATGCTAGTGACTTCGGTTGGTATGAGAACTGAATGGGGAAGGTT GATGGCAACTCTGAATGAAGGAGGAGATGATGAGACACCCCTTCAGGTTAAATTGAATGGGGTTGCAACCATTATTGGAA AAATAGGCTTGGGTTTTGCCTTGTTGACATTCCTTGTTCTTACTGGTAGGTTTTTGTTTGAGAAAATAGTGGACCACAAG ATCACAGAATGGGGTCTAGATGATGCATCTAAGCTTCTCAATTTCTTTGCAACTGCTGTCATTATAATAGTTGTGGCAGT TCCTGAGGGGTTACCTTTGGCAGTGACACTAAGCCTTGCATTTGCAATGAAGAAACTAATGCAAGATAAGGCACTAGTCA GGCACCTCGCTGCATGTGAGACAATGGGTTCTGCTGGTTGCATTTGCACAGACAAGACTGGGACTTTAACTACAAATCAC ATGGTTGTAGATAAAATATGGATTTGCCAACATACCAAGATAATTCAAAGAGGCAACAATGATGATGTGTTGAAAAAATC CATTTCTGAACAGATATTTGATCTCTTTTTGCAGTCCATATTCCAAAACACTGGCTCAGAGGTAGTCAAAGGGCAAGATG GAAAAACCAAGGTCATGGGTACTCCCACAGAGTCAGCATTGTTGGAACTTGGTTTGCTTTTGGGAGGTGATTCCAAGTTC TATAATAACAAGTATAAGATAGTAAAAGTTGAGCCTTTCAATTCAATCAAAAAAAAGATGTCAGTTCTTGTGTCTCTTCC TGATGGTACCAACAAGTATAGAGCATTTTGCAAAGGAGCATCAGAAATAGTTCTAAAAATGTGTGACAAAGTTGTTAGTG AAGACGGCAAAGTCGTAGATTTGAACGAGCAACAGAGAAACAGCATCACAGAAGTTATCAATGGTTTTGCTTCTGAGGCT CTGAGAACACTCGGCATAGCCTTCAAGGATGTTGAAGGATCATCCTCTGGAGGAGATAATAACATTCCTGAGGATAAGTA CACGTTGATTGCAATTATTGGGATCAAGGATCCAGTGAGGCCTGGTGTAAAAGAAGCTGTGAAGACTTGTTTAGATGCTG GGATAATTGTTAGAATGGTAACTGGTGACAACATAAATACTGCTAAAGCAATAGCTAAAGAATGTGGCATCTTGACTGAT GGATTGGCGATAGAGGGACCGGATTTCCGGAACAAGACTCAGCAAGAAATGGAAGAGATAATTCCCAAAATACAGGTTAT ATTACTCTTCATTGGATGCTCCTTTTGATGTTTAGCAAAGATGGTGTGTTTATAAAGTGGTTGCTTAATTAATGTGTGTA GGTAATGGCTCGATCTTTGCCTCTTGACAAACACACTTTGGTGACCCGTTTGAGGAATGACTTTAATGAAGTTGTGGCAG TAACTGGTGATGGGACCAACGATGCTCCAGCGTTGCATGAGGCTGATATTGGACTTGCTATGGGCATTGCTGGAACTGAG GTTTGTCACTAGCACAATCCATGTATTTACCACTTGTCCCATCTTAGAATATGTGCCATTACCCGCTTGCTTTCTCTCTT CCATTAATTACACAACAAAGGAATTGGACCACCCTTTAGAAGACATTTGTTCTCACTTTAAACCTACAATACTATACCCA CTTCCAACACTAGTAGGTTACTAATACCAGTCGAGTGTAACATTAATGTGTCTCCTAATCAATTTATTTTAGTAGTTATG TAGCAATATTGGTTGAACATGTTAACTTCCATGATCTCCAGGTAGCAAAAGAGAATGCTGATGTGATTGTAATGGATGAT AACTTCGCCACCATAGTGAATGTTGCCAGATGGGGTCGTTCTGTTTACATTAACATACAAAAATTTGTCCAGTTCCAGTT AACAGTTAATGTTGTAGCTCTCATGCTGAACTTCATTTCAGCTTGTGTGTCAGGTATTGGATAATACAGCAAACTTTATA AGACACTATTTATATGTCACATTAAATTTGGGTGACTAATCATAAGAATTTCAGGCTCTGCTCCTCTTACTGCTGTTCAA ATGCTTTGGGTGAATATGATCATGGACACTCTAGGAGCATTGGCATTGGCTACAGAACCTCCCCATGATGGGCTAATGAA AAGGCCACCTATTGGAAGGAATGCCAAATTCATCACTGGGGTCATGTGGAGGAACATAATTGGTCAGAGCATCTATCAAA TTATTGTCCTTTTGATTCTCAAATTTAAAGGAAAACAGATTCTCAAGCTCAATGGACCTGAAGAGGATGCCACCTCTGTT CTGAATACAGTAATATTCAACACCTTTGTGTTTTGCCAGGTACCTGATCATTAGCCTTCAGTTTTGCATTTTTTTTCTCC CCTCATGTACTCCATGGCACGTTTTTCTTAAGAACTACGTGTGTGATAGGATCACAATTGATTTTGGTACAAAAGTGGCA TGAACTTGGTTATAAGTCAATTTATTTACGTTTAGATACATTTATGAAAAGTATGATTTTTGTAGGTAATGTTGTGAAAT CCAATTGTAGAA
CDS sequence (LotjaGi3g1v0546200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTCTCCAAAGAGGTCCATGAAGCAGGTTTCCGAATCGAGCCAGATGAATTAGCCTCCATTGTTCGGTCCCACGACAC AAAATCTTTGGAACACCATAAGGGAGTTGAAGGATTAGCAGAAGCTCTCCGTGTGTCATTGCAAGACGGCATCAGTTCAC ACGATGTAGAACACAGACAGAAAACCTATGGTTTTAACCGCTTTACGGAGAAGCCCTCCAGAAGTTTTTGGATGTTCGTT TGGGATGCAATGCAAGATTTAACTCTAATTATCCTCATGGTATGTGCTGTGGTTTCAGTAGGTGTTGGAATCTCAACTGA AGGTTGGCCAAAAGGTATGTATGATGGAGTGGGAATCATACTGTGTATTCTTTTAGTGGTCTTTGTCACTTCAATCAGTG ACTACAAACAGTCTTTACAATTCAAGGATTTGGATAAAGAAAAGAAAAATGTCAGCATTCAAGTTACAAGAGATAGTAGG AGGCAAAAGGTTTCAATTTATGATCTAGTGGTAGGAGATGTGGTTCATCTCTCAATTGGAGACATAGTTCCTGCAGATGG TTTATTCATATCAGGGTTTAGCTTATTGATTGATGAGTCAAGTTTATCAGGTGAGAGTGAGGCTGTGAATGCTGATCAAC AGAAGCCTTTTCTTCTATCTGGAACCACAGTGCAAGATGGCTCTGCTAAAATGCTAGTGACTTCGGTTGGTATGAGAACT GAATGGGGAAGGTTGATGGCAACTCTGAATGAAGGAGGAGATGATGAGACACCCCTTCAGGTTAAATTGAATGGGGTTGC AACCATTATTGGAAAAATAGGCTTGGGTTTTGCCTTGTTGACATTCCTTGTTCTTACTGGTAGGTTTTTGTTTGAGAAAA TAGTGGACCACAAGATCACAGAATGGGGTCTAGATGATGCATCTAAGCTTCTCAATTTCTTTGCAACTGCTGTCATTATA ATAGTTGTGGCAGTTCCTGAGGGGTTACCTTTGGCAGTGACACTAAGCCTTGCATTTGCAATGAAGAAACTAATGCAAGA TAAGGCACTAGTCAGGCACCTCGCTGCATGTGAGACAATGGGTTCTGCTGGTTGCATTTGCACAGACAAGACTGGGACTT TAACTACAAATCACATGGTTGTAGATAAAATATGGATTTGCCAACATACCAAGATAATTCAAAGAGGCAACAATGATGAT GTGTTGAAAAAATCCATTTCTGAACAGATATTTGATCTCTTTTTGCAGTCCATATTCCAAAACACTGGCTCAGAGGTAGT CAAAGGGCAAGATGGAAAAACCAAGGTCATGGGTACTCCCACAGAGTCAGCATTGTTGGAACTTGGTTTGCTTTTGGGAG GTGATTCCAAGTTCTATAATAACAAGTATAAGATAGTAAAAGTTGAGCCTTTCAATTCAATCAAAAAAAAGATGTCAGTT CTTGTGTCTCTTCCTGATGGTACCAACAAGTATAGAGCATTTTGCAAAGGAGCATCAGAAATAGTTCTAAAAATGTGTGA CAAAGTTGTTAGTGAAGACGGCAAAGTCGTAGATTTGAACGAGCAACAGAGAAACAGCATCACAGAAGTTATCAATGGTT TTGCTTCTGAGGCTCTGAGAACACTCGGCATAGCCTTCAAGGATGTTGAAGGATCATCCTCTGGAGGAGATAATAACATT CCTGAGGATAAGTACACGTTGATTGCAATTATTGGGATCAAGGATCCAGTGAGGCCTGGTGTAAAAGAAGCTGTGAAGAC TTGTTTAGATGCTGGGATAATTGTTAGAATGGTAACTGGTGACAACATAAATACTGCTAAAGCAATAGCTAAAGAATGTG GCATCTTGACTGATGGATTGGCGATAGAGGGACCGGATTTCCGGAACAAGACTCAGCAAGAAATGGAAGAGATAATTCCC AAAATACAGGTAATGGCTCGATCTTTGCCTCTTGACAAACACACTTTGGTGACCCGTTTGAGGAATGACTTTAATGAAGT TGTGGCAGTAACTGGTGATGGGACCAACGATGCTCCAGCGTTGCATGAGGCTGATATTGGACTTGCTATGGGCATTGCTG GAACTGAGGTAGCAAAAGAGAATGCTGATGTGATTGTAATGGATGATAACTTCGCCACCATAGTGAATGTTGCCAGATGG GGTCGTTCTGTTTACATTAACATACAAAAATTTGTCCAGTTCCAGTTAACAGTTAATGTTGTAGCTCTCATGCTGAACTT CATTTCAGCTTGTGTGTCAGGCTCTGCTCCTCTTACTGCTGTTCAAATGCTTTGGGTGAATATGATCATGGACACTCTAG GAGCATTGGCATTGGCTACAGAACCTCCCCATGATGGGCTAATGAAAAGGCCACCTATTGGAAGGAATGCCAAATTCATC ACTGGGGTCATGTGGAGGAACATAATTGGTCAGAGCATCTATCAAATTATTGTCCTTTTGATTCTCAAATTTAAAGGAAA ACAGATTCTCAAGCTCAATGGACCTGAAGAGGATGCCACCTCTGTTCTGAATACAGTAATATTCAACACCTTTGTGTTTT GCCAGGTAATGTTGTGA
Protein sequence (LotjaGi3g1v0546200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLSKEVHEAGFRIEPDELASIVRSHDTKSLEHHKGVEGLAEALRVSLQDGISSHDVEHRQKTYGFNRFTEKPSRSFWMFV WDAMQDLTLIILMVCAVVSVGVGISTEGWPKGMYDGVGIILCILLVVFVTSISDYKQSLQFKDLDKEKKNVSIQVTRDSR RQKVSIYDLVVGDVVHLSIGDIVPADGLFISGFSLLIDESSLSGESEAVNADQQKPFLLSGTTVQDGSAKMLVTSVGMRT EWGRLMATLNEGGDDETPLQVKLNGVATIIGKIGLGFALLTFLVLTGRFLFEKIVDHKITEWGLDDASKLLNFFATAVII IVVAVPEGLPLAVTLSLAFAMKKLMQDKALVRHLAACETMGSAGCICTDKTGTLTTNHMVVDKIWICQHTKIIQRGNNDD VLKKSISEQIFDLFLQSIFQNTGSEVVKGQDGKTKVMGTPTESALLELGLLLGGDSKFYNNKYKIVKVEPFNSIKKKMSV LVSLPDGTNKYRAFCKGASEIVLKMCDKVVSEDGKVVDLNEQQRNSITEVINGFASEALRTLGIAFKDVEGSSSGGDNNI PEDKYTLIAIIGIKDPVRPGVKEAVKTCLDAGIIVRMVTGDNINTAKAIAKECGILTDGLAIEGPDFRNKTQQEMEEIIP KIQVMARSLPLDKHTLVTRLRNDFNEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIVMDDNFATIVNVARW GRSVYINIQKFVQFQLTVNVVALMLNFISACVSGSAPLTAVQMLWVNMIMDTLGALALATEPPHDGLMKRPPIGRNAKFI TGVMWRNIIGQSIYQIIVLLILKFKGKQILKLNGPEEDATSVLNTVIFNTFVFCQVML
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 86 | 86 | - | – | |
| PANTHER | 2 | 857 | 856 | 0.0 | – | |
| PANTHER | 2 | 857 | 856 | 0.0 | – | |
| TIGRFAM | 24 | 856 | 833 | 0.0 | ||
| SMART | 30 | 104 | 75 | 9.2E-13 | ||
| SUPERFAMILY | 31 | 857 | 827 | 5.23E-102 | ||
| Pfam | 31 | 99 | 69 | 6.1E-19 | ||
| Gene3D | 43 | 252 | 210 | 2.3E-201 | – | |
| CDD | 56 | 804 | 749 | 0.0 | – | |
| Gene3D | 82 | 821 | 740 | 2.3E-201 | – | |
| Phobius | 87 | 106 | 20 | - | – | |
| TMHMM | 87 | 106 | 20 | - | – | |
| Phobius | 107 | 111 | 5 | - | – | |
| Phobius | 112 | 132 | 21 | - | – | |
| TMHMM | 116 | 133 | 18 | - | – | |
| TIGRFAM | 119 | 391 | 273 | 3.6E-35 | ||
| Phobius | 133 | 268 | 136 | - | – | |
| Pfam | 152 | 345 | 194 | 2.7E-38 | – | |
| SUPERFAMILY | 152 | 247 | 96 | 3.01E-24 | ||
| PRINTS | 198 | 212 | 15 | 6.2E-33 | – | |
| TMHMM | 269 | 291 | 23 | - | – | |
| Phobius | 269 | 291 | 23 | - | – | |
| Phobius | 292 | 310 | 19 | - | – | |
| Phobius | 311 | 340 | 30 | - | – | |
| TMHMM | 317 | 339 | 23 | - | – | |
| Phobius | 341 | 735 | 395 | - | – | |
| SFLD | 349 | 723 | 375 | 0.0 | – | |
| SFLD | 349 | 723 | 375 | 0.0 | – | |
| Gene3D | 364 | 716 | 353 | 2.3E-201 | ||
| Pfam | 365 | 685 | 321 | 4.9E-20 | – | |
| SUPERFAMILY | 366 | 776 | 411 | 1.72E-55 | ||
| PRINTS | 367 | 381 | 15 | 6.2E-33 | – | |
| ProSitePatterns | 369 | 375 | 7 | - | ||
| SUPERFAMILY | 373 | 581 | 209 | 5.67E-50 | ||
| Gene3D | 377 | 576 | 200 | 2.3E-201 | ||
| PRINTS | 527 | 545 | 19 | 1.0E-13 | ||
| PRINTS | 569 | 580 | 12 | 6.2E-33 | – | |
| PRINTS | 591 | 601 | 11 | 6.2E-33 | – | |
| TIGRFAM | 636 | 759 | 124 | 5.5E-28 | ||
| PRINTS | 671 | 690 | 20 | 6.2E-33 | – | |
| PRINTS | 671 | 687 | 17 | 1.0E-13 | ||
| PRINTS | 695 | 707 | 13 | 6.2E-33 | – | |
| PRINTS | 703 | 728 | 26 | 1.0E-13 | ||
| Phobius | 736 | 758 | 23 | - | – | |
| TMHMM | 738 | 760 | 23 | - | – | |
| Pfam | 756 | 857 | 102 | 9.7E-28 | ||
| Phobius | 759 | 803 | 45 | - | – | |
| TMHMM | 803 | 822 | 20 | - | – | |
| Phobius | 804 | 822 | 19 | - | – | |
| Phobius | 823 | 858 | 36 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Calcium-transporting ATPase activity | Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ca2+(cis) = ADP + phosphate + Ca2+(trans). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Calcium ion transmembrane transport | A process in which a calcium ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore. |
Expression pattern of LotjaGi3g1v0546200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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