Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0009600 |
| Transcript ID | LotjaGi4g1v0009600.3 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT1G62400.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q2MHE4|HT1_ARATH Serine/threonine-protein kinase HT1; TrEMBL-Plants: tr|A0A0L9TU20|A0A0L9TU20_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0009600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:1270815..1273548) extracted from Lotus japonicus Gifu genome v1.2.
ACAGAGAGTTTCCTTCTTCAATGGCGGGTTCATGTTTCCATGCACTTCGCTTACGAAGAACGAAGAGCAAGCCTTTTCCT TCTTCTTCTCCTTCTTCATCCAAGGCCCGGTGGAATTCTGATGCAGAGAACATGGAGAGGAAGAGATTTGACAGCTTGGA ATCATGGTCCATGATATTGGACTCTGAGAATGTGGAGACATGGGAAGCATCAAATGAGGATCAGGAGGAATGGACAGCTG ATCTTTCACAGCTTTTCATTGGTAACAAGTTTGCATCCGGGGCTCACAGTCGGATTTACCGTGGAATTTACAAGCAGCGA GCTGTTGCGGTGAAAATGGTGAGGATTCCAAACCAGAATGAGGAGAGAAGAGGCTTGCTTGAAAGCCAATTCAAATCTGA AGTGGCTTTGCTTTCACGTCTCTTTCATCCTAACATAGTCCAGGTAACTACACTGCACTGCACTCAAGTCAACAAAATTA TCAGTCCATATAAGTCTTAGCTTCTAAGTGATAATGCATTGAATTTTGTGCAAATTGTTAAATCAAACATGCATGTATTA CGTGTTTGATTCCACATTAATAGGCTTTAGAATCACTTATGGTTAGAAGCTATAAGTATATGTTTAATGTTTGGTTTGAA GTTGCTCATCCAGACATGCACTTCTATTTCTCTCGACCATGGGTTTTCATCATTAGAACATGTTTAAGTGAAATTATTAG TGCGTTTGGATTGGTGGGAAAACACTTTTGATCCCACTTTCCCACGTTATAAATGTCAACACACCAATTTCCTTCAGTTA CCATTCAATTGAATCCAACGTGAATTCAAACATGGCCTTAGAAGCACTTCAGGCTCACAAAATCATGTTCAGGCCAAAGG ACAAAACTTGAGTTTGCATGGAAGTGCTTCTAGCTCTTCTCACAAGACATTTCTATTATTTTCCTATGAAATCACCTTTA TCGTAAACATATGCAAGCATAAATCACATCACTTTCAATTTGCTTTTACCACAATCAATTTTGTCAAAATCAATTCTATC CAAAATGACTTCTGCCAGCACTAAACCAAACATGCACCAAGTCTTATCTTCTATGTAAACATGCCTATGATTTTGTGTGA ATCGTGAAACACAACACCCACTTAGCTTTATAAGCTTTTGTTTATGAAGCAAAGCTTCAACGCAGTTTATGAATCCTAGT TGTTTCCTACAGTTTGGTTTTGGATATATAAATCCACTGCCACTTACTACTTCAGTGAATACATTACCAACTAACATCTA TATGCAGGGGTGTGTATAATTCCTTAGATTTGAATTGGTGGCTGAGGTCTGATCTTTAAATGACTCTTAATTTACAGTTC ATTGCAGCCTGTAAAAAACCTCCAGTATATTGTATCATTACAGAATACATGTCACAAGGAACTCTGAGGATGTATTTGAA CAAGAAAGAGCCATACTCTCTATCAACAGAAACTATACTAAGGTTAGCTCTTGACATATCTAGGGGCATGGAGTATCTTC ACTCGCAAGGTGTGATTCACAGGGACCTCAAGTCAAATAACTTGCTTCTCAACGATGAGATGAGAGTTAAGGTGGCAGAT TTTGGAACATCCTGTCTCGAAACGCGGTGCCGGGAGACCAAAGGAAACATGGGAACATATCGTTGGATGGCACCAGAGAT GATTAAGGAAAAGCCTTACACTCGGAAAGTTGATGTCTATAGCTTTGGAATTGTGCTTTGGGAACTCACAACTGCATTAC TTCCCTTCCAAGGAATGACCCCAGTGCAAGCTGCTTTTGCTGTTTCTGAGAAGGTCAGAGCCTATATCTAAATTTAAGAA ATGTTATTGTTATTAGCATGAATGCTTTCAGATTGAATACTGCATCACCCTTCTCTTCTATGCTTATAACATGTTTGGTT CCAGAGTAAAATGCAGTAGAACCACTTCTGGTTAGAAGCTACAAATCTTGTCTTCCGAGCAAATGTGGCTAGTATTGTGT GCAAATTGTGAAACCAAATGCGTACTTAGTATTTTTTATGTGTTAGTTTTAGAGCCTTTTGTCCCTTGTTGAGTTTCCTT AATCTGGACTGGATTAGTAATCTTTAAGACATCATGCCTAATGATAAACCAAATATTCTTTATGCAAGTTCAATTGAGGC CATAATTTTGATCAGGTTGACCATAGAATATATGCCTAATCAATTCTGCGGAGATGATCGAGAGAGTATCTTCTGCAATA AACATAACCAATTGTTAGATTTCGTAATTGGATTTCACTATCATTACCCTATAGAAACCAGTTTTCCTATAAATGTATCC AAACATAAATCACTTCACTTAGAACTCAGTTTAAGTGCGTGTTTGGATCATCGTTGTCAAAATTGATTTTGTCAGAATTG ATTACAGTAAAAATGACTATTTTAAGAAAGCATTGGCTGAATGAATTACTTTGATTTGTTGATGAGCAGAATGAAAGACC TCCACTGCCTGCAAGTTGTCAACCTGCACTTGCTCATCTGATAAAGCGTTGTTGGTCAGCAAACCCTTCGAAGCGACCAG ATTTCAGTGACATTGTGTGTACTCTCGAGAAGTACGATGAGTGTGTCAAGGAAGGTCTTCCTCTCACTCACCATTCAAGC CTAGCAGTCAGCGGAAACGCCATTATTGAATGCATAAAAAGCTGCTTCTCAATGAACTCCTCCTCCATACCTGTATATGC TTGAATTCATCCAA
CDS sequence (LotjaGi4g1v0009600.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGGTTCATGTTTCCATGCACTTCGCTTACGAAGAACGAAGAGCAAGCCTTTTCCTTCTTCTTCTCCTTCTTCATC CAAGGCCCGGTGGAATTCTGATGCAGAGAACATGGAGAGGAAGAGATTTGACAGCTTGGAATCATGGTCCATGATATTGG ACTCTGAGAATGTGGAGACATGGGAAGCATCAAATGAGGATCAGGAGGAATGGACAGCTGATCTTTCACAGCTTTTCATT GGTAACAAGTTTGCATCCGGGGCTCACAGTCGGATTTACCGTGGAATTTACAAGCAGCGAGCTGTTGCGGTGAAAATGGT GAGGATTCCAAACCAGAATGAGGAGAGAAGAGGCTTGCTTGAAAGCCAATTCAAATCTGAAGTGGCTTTGCTTTCACGTC TCTTTCATCCTAACATAGTCCAGTTCATTGCAGCCTGTAAAAAACCTCCAGTATATTGTATCATTACAGAATACATGTCA CAAGGAACTCTGAGGATGTATTTGAACAAGAAAGAGCCATACTCTCTATCAACAGAAACTATACTAAGGTTAGCTCTTGA CATATCTAGGGGCATGGAGTATCTTCACTCGCAAGGTGTGATTCACAGGGACCTCAAGTCAAATAACTTGCTTCTCAACG ATGAGATGAGAGTTAAGGTGGCAGATTTTGGAACATCCTGTCTCGAAACGCGGTGCCGGGAGACCAAAGGAAACATGGGA ACATATCGTTGGATGGCACCAGAGATGATTAAGGAAAAGCCTTACACTCGGAAAGTTGATGTCTATAGCTTTGGAATTGT GCTTTGGGAACTCACAACTGCATTACTTCCCTTCCAAGGAATGACCCCAGTGCAAGCTGCTTTTGCTGTTTCTGAGAAGA ATGAAAGACCTCCACTGCCTGCAAGTTGTCAACCTGCACTTGCTCATCTGATAAAGCGTTGTTGGTCAGCAAACCCTTCG AAGCGACCAGATTTCAGTGACATTGTGTGTACTCTCGAGAAGTACGATGAGTGTGTCAAGGAAGGTCTTCCTCTCACTCA CCATTCAAGCCTAGCAGTCAGCGGAAACGCCATTATTGAATGCATAAAAAGCTGCTTCTCAATGAACTCCTCCTCCATAC CTGTATATGCTTGA
Protein sequence (LotjaGi4g1v0009600.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGSCFHALRLRRTKSKPFPSSSPSSSKARWNSDAENMERKRFDSLESWSMILDSENVETWEASNEDQEEWTADLSQLFI GNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQNEERRGLLESQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMS QGTLRMYLNKKEPYSLSTETILRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETRCRETKGNMG TYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVSEKNERPPLPASCQPALAHLIKRCWSANPS KRPDFSDIVCTLEKYDECVKEGLPLTHHSSLAVSGNAIIECIKSCFSMNSSSIPVYA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 351 | 348 | 3.3E-208 | ||
| PANTHER | 4 | 351 | 348 | 3.3E-208 | – | |
| MobiDBLite | 15 | 35 | 21 | - | – | |
| MobiDBLite | 16 | 32 | 17 | - | – | |
| SUPERFAMILY | 56 | 332 | 277 | 6.52E-81 | ||
| Gene3D | 67 | 160 | 94 | 2.2E-23 | – | |
| SMART | 78 | 339 | 262 | 4.5E-62 | ||
| ProSiteProfiles | 78 | 351 | 274 | 42.463 | ||
| Pfam | 80 | 331 | 252 | 1.8E-66 | ||
| CDD | 85 | 329 | 245 | 4.08047E-128 | – | |
| PRINTS | 156 | 169 | 14 | 3.5E-19 | ||
| Gene3D | 161 | 366 | 206 | 3.2E-61 | – | |
| PRINTS | 194 | 212 | 19 | 3.5E-19 | ||
| ProSitePatterns | 200 | 212 | 13 | - | ||
| PRINTS | 240 | 250 | 11 | 3.5E-19 | ||
| PRINTS | 259 | 281 | 23 | 3.5E-19 | ||
| PRINTS | 303 | 325 | 23 | 3.5E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein serine/threonine kinase activity | Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Biological process | Cellular response to carbon dioxide | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbon dioxide (CO2) stimulus. |
Expression pattern of LotjaGi4g1v0009600.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…