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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0009600 |
| Transcript ID | LotjaGi4g1v0009600.5 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT1G62400.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q2MHE4|HT1_ARATH Serine/threonine-protein kinase HT1; TrEMBL-Plants: tr|A0A0L9TU20|A0A0L9TU20_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0009600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:1270825..1273552) extracted from Lotus japonicus Gifu genome v1.2.
CTAAACAGAGAGTTTCCTTCTTCAATGGCGGGTTCATGTTTCCATGCACTTCGCTTACGAAGAACGAAGAGCAAGCCTTT TCCTTCTTCTTCTCCTTCTTCATCCAAGGCCCGGTGGAATTCTGATGCAGAGAACATGGAGAGGAAGAGATTTGACAGCT TGGAATCATGGTCCATGATATTGGACTCTGAGAATGTGGAGACATGGGAAGCATCAAATGAGGATCAGGAGGAATGGACA GCTGATCTTTCACAGCTTTTCATTGGTAACAAGTTTGCATCCGGGGCTCACAGTCGGATTTACCGTGGAATTTACAAGCA GCGAGCTGTTGCGGTGAAAATGGTGAGGATTCCAAACCAGAATGAGGAGAGAAGAGGCTTGCTTGAAAGCCAATTCAAAT CTGAAGTGGCTTTGCTTTCACGTCTCTTTCATCCTAACATAGTCCAGGTAACTACACTGCACTGCACTCAAGTCAACAAA ATTATCAGTCCATATAAGTCTTAGCTTCTAAGTGATAATGCATTGAATTTTGTGCAAATTGTTAAATCAAACATGCATGT ATTACGTGTTTGATTCCACATTAATAGGCTTTAGAATCACTTATGGTTAGAAGCTATAAGTATATGTTTAATGTTTGGTT TGAAGTTGCTCATCCAGACATGCACTTCTATTTCTCTCGACCATGGGTTTTCATCATTAGAACATGTTTAAGTGAAATTA TTAGTGCGTTTGGATTGGTGGGAAAACACTTTTGATCCCACTTTCCCACGTTATAAATGTCAACACACCAATTTCCTTCA GTTACCATTCAATTGAATCCAACGTGAATTCAAACATGGCCTTAGAAGCACTTCAGGCTCACAAAATCATGTTCAGGCCA AAGGACAAAACTTGAGTTTGCATGGAAGTGCTTCTAGCTCTTCTCACAAGACATTTCTATTATTTTCCTATGAAATCACC TTTATCGTAAACATATGCAAGCATAAATCACATCACTTTCAATTTGCTTTTACCACAATCAATTTTGTCAAAATCAATTC TATCCAAAATGACTTCTGCCAGCACTAAACCAAACATGCACCAAGTCTTATCTTCTATGTAAACATGCCTATGATTTTGT GTGAATCGTGAAACACAACACCCACTTAGCTTTATAAGCTTTTGTTTATGAAGCAAAGCTTCAACGCAGTTTATGAATCC TAGTTGTTTCCTACAGTTTGGTTTTGGATATATAAATCCACTGCCACTTACTACTTCAGTGAATACATTACCAACTAACA TCTATATGCAGGGGTGTGTATAATTCCTTAGATTTGAATTGGTGGCTGAGGTCTGATCTTTAAATGACTCTTAATTTACA GTTCATTGCAGCCTGTAAAAAACCTCCAGTATATTGTATCATTACAGAATACATGTCACAAGGAACTCTGAGGATGTATT TGAACAAGAAAGAGCCATACTCTCTATCAACAGAAACTATACTAAGGTTAGCTCTTGACATATCTAGGGGCATGGAGTAT CTTCACTCGCAAGGTGTGATTCACAGGGACCTCAAGTCAAATAACTTGCTTCTCAACGATGAGATGAGAGTTAAGGTGGC AGATTTTGGAACATCCTGTCTCGAAACGCGGTGCCGGGAGACCAAAGGAAACATGGGAACATATCGTTGGATGGCACCAG AGATGATTAAGGAAAAGCCTTACACTCGGAAAGTTGATGTCTATAGCTTTGGAATTGTGCTTTGGGAACTCACAACTGCA TTACTTCCCTTCCAAGGAATGACCCCAGTGCAAGCTGCTTTTGCTGTTTCTGAGAAGGTCAGAGCCTATATCTAAATTTA AGAAATGTTATTGTTATTAGCATGAATGCTTTCAGATTGAATACTGCATCACCCTTCTCTTCTATGCTTATAACATGTTT GGTTCCAGAGTAAAATGCAGTAGAACCACTTCTGGTTAGAAGCTACAAATCTTGTCTTCCGAGCAAATGTGGCTAGTATT GTGTGCAAATTGTGAAACCAAATGCGTACTTAGTATTTTTTATGTGTTAGTTTTAGAGCCTTTTGTCCCTTGTTGAGTTT CCTTAATCTGGACTGGATTAGTAATCTTTAAGACATCATGCCTAATGATAAACCAAATATTCTTTATGCAAGTTCAATTG AGGCCATAATTTTGATCAGGTTGACCATAGAATATATGCCTAATCAATTCTGCGGAGATGATCGAGAGAGTATCTTCTGC AATAAACATAACCAATTGTTAGATTTCGTAATTGGATTTCACTATCATTACCCTATAGAAACCAGTTTTCCTATAAATGT ATCCAAACATAAATCACTTCACTTAGAACTCAGTTTAAGTGCGTGTTTGGATCATCGTTGTCAAAATTGATTTTGTCAGA ATTGATTACAGTAAAAATGACTATTTTAAGAAAGCATTGGCTGAATGAATTACTTTGATTTGTTGATGAGCAGAATGAAA GACCTCCACTGCCTGCAAGTTGTCAACCTGCACTTGCTCATCTGATAAAGCGTTGTTGGTCAGCAAACCCTTCGAAGCGA CCAGATTTCAGTGACATTGTGTGTACTCTCGAGAAGTACGATGAGTGTGTCAAGGAAGGTCTTCCTCTCACTCACCATTC AAGCCTAGCAGTCAGCGGAAACGCCATTATTGAATGCATAAAAAGCTGCTTCTCAATGAACTCCTCCTCCATACCTGTAT ATGCTTGA
CDS sequence (LotjaGi4g1v0009600.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGGTTCATGTTTCCATGCACTTCGCTTACGAAGAACGAAGAGCAAGCCTTTTCCTTCTTCTTCTCCTTCTTCATC CAAGGCCCGGTGGAATTCTGATGCAGAGAACATGGAGAGGAAGAGATTTGACAGCTTGGAATCATGGTCCATGATATTGG ACTCTGAGAATGTGGAGACATGGGAAGCATCAAATGAGGATCAGGAGGAATGGACAGCTGATCTTTCACAGCTTTTCATT GGTAACAAGTTTGCATCCGGGGCTCACAGTCGGATTTACCGTGGAATTTACAAGCAGCGAGCTGTTGCGGTGAAAATGGT GAGGATTCCAAACCAGAATGAGGAGAGAAGAGGCTTGCTTGAAAGCCAATTCAAATCTGAAGTGGCTTTGCTTTCACGTC TCTTTCATCCTAACATAGTCCAGTTCATTGCAGCCTGTAAAAAACCTCCAGTATATTGTATCATTACAGAATACATGTCA CAAGGAACTCTGAGGATGTATTTGAACAAGAAAGAGCCATACTCTCTATCAACAGAAACTATACTAAGGTTAGCTCTTGA CATATCTAGGGGCATGGAGTATCTTCACTCGCAAGGTGTGATTCACAGGGACCTCAAGTCAAATAACTTGCTTCTCAACG ATGAGATGAGAGTTAAGGTGGCAGATTTTGGAACATCCTGTCTCGAAACGCGGTGCCGGGAGACCAAAGGAAACATGGGA ACATATCGTTGGATGGCACCAGAGATGATTAAGGAAAAGCCTTACACTCGGAAAGTTGATGTCTATAGCTTTGGAATTGT GCTTTGGGAACTCACAACTGCATTACTTCCCTTCCAAGGAATGACCCCAGTGCAAGCTGCTTTTGCTGTTTCTGAGAAGA ATGAAAGACCTCCACTGCCTGCAAGTTGTCAACCTGCACTTGCTCATCTGATAAAGCGTTGTTGGTCAGCAAACCCTTCG AAGCGACCAGATTTCAGTGACATTGTGTGTACTCTCGAGAAGTACGATGAGTGTGTCAAGGAAGGTCTTCCTCTCACTCA CCATTCAAGCCTAGCAGTCAGCGGAAACGCCATTATTGAATGCATAAAAAGCTGCTTCTCAATGAACTCCTCCTCCATAC CTGTATATGCTTGA
Protein sequence (LotjaGi4g1v0009600.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGSCFHALRLRRTKSKPFPSSSPSSSKARWNSDAENMERKRFDSLESWSMILDSENVETWEASNEDQEEWTADLSQLFI GNKFASGAHSRIYRGIYKQRAVAVKMVRIPNQNEERRGLLESQFKSEVALLSRLFHPNIVQFIAACKKPPVYCIITEYMS QGTLRMYLNKKEPYSLSTETILRLALDISRGMEYLHSQGVIHRDLKSNNLLLNDEMRVKVADFGTSCLETRCRETKGNMG TYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVSEKNERPPLPASCQPALAHLIKRCWSANPS KRPDFSDIVCTLEKYDECVKEGLPLTHHSSLAVSGNAIIECIKSCFSMNSSSIPVYA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 351 | 348 | 3.3E-208 | ||
| PANTHER | 4 | 351 | 348 | 3.3E-208 | – | |
| MobiDBLite | 15 | 35 | 21 | - | – | |
| MobiDBLite | 16 | 32 | 17 | - | – | |
| SUPERFAMILY | 56 | 332 | 277 | 6.52E-81 | ||
| Gene3D | 67 | 160 | 94 | 2.2E-23 | – | |
| SMART | 78 | 339 | 262 | 4.5E-62 | ||
| ProSiteProfiles | 78 | 351 | 274 | 42.463 | ||
| Pfam | 80 | 331 | 252 | 1.8E-66 | ||
| CDD | 85 | 329 | 245 | 4.08047E-128 | – | |
| PRINTS | 156 | 169 | 14 | 3.5E-19 | ||
| Gene3D | 161 | 366 | 206 | 3.2E-61 | – | |
| PRINTS | 194 | 212 | 19 | 3.5E-19 | ||
| ProSitePatterns | 200 | 212 | 13 | - | ||
| PRINTS | 240 | 250 | 11 | 3.5E-19 | ||
| PRINTS | 259 | 281 | 23 | 3.5E-19 | ||
| PRINTS | 303 | 325 | 23 | 3.5E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein serine/threonine kinase activity | Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Biological process | Cellular response to carbon dioxide | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbon dioxide (CO2) stimulus. |
Expression pattern of LotjaGi4g1v0009600.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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