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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0012200 |
| Transcript ID | LotjaGi4g1v0012200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Aspartic proteinase; TAIR: AT1G62290.1 Saposin-like aspartyl protease family protein; Swiss-Prot: sp|Q8VYL3|APA2_ARATH Aspartic proteinase A2; TrEMBL-Plants: tr|A0A151SU18|A0A151SU18_CAJCA Aspartic proteinase; Found in the gene: LotjaGi4g1v0012200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:1509522..1515054) extracted from Lotus japonicus Gifu genome v1.2.
CAAAAAGCCTATGTGCAACCATACACAAGTTTTTATTTGTGTAGATTAAATTTTTCCGTAATATACACCCTCATAAATTT GAGAAAGATGGCATATAGTTGTGTTGCAAAATTACAAAACCGCACCGCCACGTAACTAACGAACCCATCGCGATCCATGA ATACGTGGGCGCGTGTGGGTCTATTCATTCAAATCCACGGCTAAGATCTCGCAGAAATCGACGGTTGAGATCTTGAAATA TCACACCGCCTCGTATTCTTTTCTTTTATTATTTTATTTATTTCGAATTGAGTTTGCGTTATTCTGAGGCGCAAAGAAAG GAATAAAAGTTGAATGAAAGAGTGTGTAGTGTGACAGTGTTTGTTTTTTGCTTTTCGATCAATTCCCATTTCCTCTCTTC TCTTCTGCGAATCTCGTTTCCTTACTCTGGTAATCTTCTTCTTCTTCTTCTTCTTCTTCATTTTCGCTCTTCAAATCAAT TAATTTGACACATTCTACCTGTTTTGTGCACATCACATGCAATCACACTTTCACTGACTCTATACACTGCGTTACCATTT TTTTAATCTGTCTCTTGTTTTTGTTTTATGCGCAGATTCTCTCTCTCTATAATACTATAGTTTATTCAATTATTAATTTA ATCGCTTCTCAAATTCTGTTTCTCTTTGCGAATTTAGATCATTTTAATCACTTCATTGATCTCTATGATCTAGCTTCTGT GGATTTTATTTTTACCGATTTTAATTTTTATTAATTTCTCAATATTTTTTGTTAGCATTGGTTTGATGGAATAGAGATCA TGCAATTTGGAATGTCATGTCACATGCATTTTCCCCTAAACATTATACTACATACCATTTTCATTTTTCACTTGCTTAAT TAGGTTAATTACTAAATTTGTTGTGTTAATTTTATTTTTAATTTGGGTGAACAGGAAAACATGGGAAGAAACAAGTTGCT ATGTTTGTTTGTGTCAACCCTGTTGTTGCTTTCTGTGGTGTCATGTGCACCCAATGATGATGGGCTGCACAGGATTGGAC TGAAAAAGATTAAACTGGACAGAAACAACAGGCTTGCTGGTAGAATTGGAACCAAGGAATCTGAGTCTTTTAGAGCTTCC ATTAGAAAGTATCACCTCCAAAACAACTTTGTTGACACTGAGGAAACTGATATTGTTGCCTTGAAGAATTACTTGGATGC TCAGTATTATGGTGAAATATCCATTGGAACCTCTCCTCAGAAATTCACTGTTATTTTCGACACCGGAAGCTCGAACTTGT GGGTTCCATCATCTAAATGTACCTTCTCGGTAAGAAGCTTTTAGTTTAATCCTGCATTCATCTATGTATTATGATGAGTT ATGGATATCTTACTTTCTCGCATTATTTATTCATGTCATTTTGCATCTTATTGCAGGTTGCATGCTACTTCCATGCCAAG TACAAGTCCAGCAGATCAAGTACTTATAAGAAAAATGGTTTGTCTTCCTAGTAATTTTCTTATGAGGCATTAGAGCTAAC TATGTGTTTGAATATAATGTAAAATCACTCATGTGGCTCTTACCCAACAGCTAAAGCTTTTGGGATATTTGGTTGCTTGA CACTTCTGAGACTTGTGTGTCTACATAATGTTCTATTATTTATGAGAGTAGTTGGAAGTCTTGTTTTTTTTTACCTCTGT AGTGTATAAATAGGAACAAATATTTAGTCCTTTCCTAAAGATTGACTTGTGATGTGGTTAAAATCAAGACTTTTACCCTA TTGAGGAGCTAAAGTTTGAAATTTTACCATCCACCCTGTGGTTATTGGCAATAACATTGTTGGAAATTACTAGCTTCTGG CATATTGTAATTTGGTTTGGCATATCTTCACTTACGATTCATGTTGGTTTATATGTTCTTCTATTTTGCATCACTTTTTG CACCTGTAGGAGGAATACTGTCTTTTTTTTATAATACAAGATTTTGTTTAATGTTATTTAGGGACTGCTGCTGCAATTCA ATATGGTACTGGAGCAATTTCTGGTTTCTTTAGTTATGACAGCGTTAAAGTTGGTGACATAGTTGTAAAGAACCAGGTAA TGCTCATCATCAATCTATTTTATGCCAGTAGAGTAGAGGAAAGTGCAAGATGGCTTCTTTCATAGTATATTGATTAATAA TTCATGGAGTACTTTTTTTACCACTGTCAGGAATTTATTGAAGCAACTAAGGAGCCTAGTGTTACATTTTTGGTGGCCAA GTTCGATGGTATACTTGGGCTTGGATTTAAAGAGATATCAGTTGGAAATGCTGTTCCAGTGTGGTATTTGTTTACCTTTA AATTTTGACTCATCAATTTGATAATTGAATCAATCTTGTATATGCTAAAGTATGGCTGTCTATCATTGACCCACATAGTG CGTTCAACCCTGGACCTTGTGCATACTGCATAGCAGAAGCTGCAGCCTGCCCTTTTTTTATGTTGTCAAAAGTTTACTGA ATCCCCGTGTCATTATAACATGTTGTGTGTCACAGGTACAATATGGTTGAACAAGGTCTTATCAAGGAGCCTGTATTTTC GTTTTGGCTCAACCGTAAACCAGAGGAAGAGGAAGGCGGTGAGATTGTTTTTGGTGGTGTTGATCCTGCCCACTACAAGG GAAATCACACTTACGTGCCTGTGACAAGAAAAGGATATTGGCAGGTTAATCATTAAATTTCATTTGTAATACTTATCAAT GTTATTTTACTTACCTTTTTTCTTGTTTTTTGTTTTCAGTTTGACATGGGAGATGTACTCATTGACGGTAAATCAACTGG TATGTGTAGAAGATGTATTACCAAAATTTTCAGTTTACTCTCCTATAATATATGATAGCATTTTCACAAATGGGCTGTAG CTTTTATTTCATCGGACTGACCTGCCCTTATTCTCATTCAGGATATTGCGCTGATGGATGTTCAGCCATTGCGGACTCAG GAACTTCTTTATTGACAGGTCCAACGGTATGAACAAATTTCTTGTAGATATAAATTGATATTTTTCTTTTCTTTTCGACT GTGGAGTTTTAAAGATGGTAGATTTGGCACTGATGGATATCAACTGTCACCTGAAATGAACAGGAGAAATGAAAAGGGTG GGTGATTGAAATGTAAATTAAAATAATAAACAAGTAAATTGCTTATTGAGACTCTGAAAGTTGGGTTGTTAAACACATCC AATTTATAGATATCAATTATGGCTCCGTTCTTTTTTTACTAGTGTTCTGTTTGAACATGGCTATACTAATGCAGCATTTG ATTGCTTCTCTCCCATGAGACATTGTCTCTTGGTCAGTTCATGATCAATTTCTTCAACATCAATTGTGGGGCCTTTAGAA ATTGACAATTGTGATTGCAGTTTATATTATTACCTGAATGAAAGAAGGTCTAATGAGTAACAAATGCCTCTGACGTGCTT ATTACTAACATTGCATGTGGTTTGTTCTTGCAGACTGTGATTACCATGATAAACCATGCAATTGGAGCATCTGGAGTTGT AAGCACAGAATGCAAAGCCATTGTTGCGGAGTATGGACAGACAATCATTGACCTGCTTTTGGCTGATGTGAGCACCATTT GTATTTTGTTGATTAGTTCTTGGCATATTTTGGTTGGATTAGTTTCTTACCTGGGGTCATTTGTGGCATGTTAGAAAGGT TTGATCAATAAGCACCACTTTCTTATGTTTTTTACTTTACTCCTGCAGGCAGAGCCCAAGAAGGTCTGCTCCCAAATTGG ATTGTGCACTTTTGATGGGACTCATGGTGTTAAGTAAGGCTCCATGATATTTTCACCCTTTGGGTCTTTGGTAATTTGAT ACTATAATATATTTTGTAGGTGTACTGTGATTGCTATTTTGATGTCTTTCACTTTTCATTGTTAGTGGGGGTATCGAGAG CGTAGTGGATGAGAATGATAGAAAATCGTCTGGCCGTGGTCTTCATGGTGCTGGTTGTTCTGCTTGTGAGATGGCGGTTG TTTGGATGCAGAATCAGCTGGGCCAAAATCAGACACGAGATCAGATACTAAGCTATATCAATAACGTGAGTGGGCTGTCT TTATTTTTCTATTTGAGTACCTTTGTTGCACCTGTTGATTGTAAGCTTCATGGTGGTGATTGGTCATATTGCAGCTTTGT GATAAAATGCCTAGTCCAATGGGAGAATCAGCTGTTGACTGTGGGAGTATCTCTTCTCTGCCTGTCATTTCCTTGACAAT TGGTGGAAGAACTTTTGATCTTGGTCCAGAGGAGGTATGAACCTGATTGGTTGCTTGTGTAGTGGCTTCTTTTTGGTAGT GGCTGACCACTATTTGTATTTAATTTTATGAAAATAAGATAAAATCATGAAGAGGAAAAGGAATCATAGCTTATAGAAAA CGAACAACACTAGGAGATAAAGCTGTTTACATCAGCCGAAAAAAAGCTTTCTAGTGTCTTCCCAAACGCAAGTAATTCCA TTTAACTTTATCTAATGAAACCCTGAGCTAAACAACATGATTTGTAATTGACACTAGAACATTCAATATTGTTGCTTTAC AAAGTTGTTTTATACCTTCTATCATTGAAAGATTTGAAAAAGAAGGTAGAGCAGGAAGCTAACATACACAAAATGTCAGT GAGTTTTGCTACTAAAAGTCATGATATTATATAGTAGCAGTGTGCAGTTGTATAGTTTTTAATTTTATGCCTTGTTTTCA TTCAATTTTGTTTTTGTTTTGTTCAGTACATACTCAAAGTGGGAGAAGGTCCTGCGGCTCAGTGCATTAGCGGCTTTACT GCTATGGATATTCCTCCTCCACGTGGACCTCTCTGGTACATTCAATTTCTTTAATTAATTACCTTTAGACATGTACACTA TGGCATTTGCCTCTTAACTTTCATTACCTGTTTGTCTTTTAGATTCTGATGCATCTTATTTGATTCTCTCCTGATTAAAT AAATGCAGGATCCTTGGAGATGTGTTCATGGGGCGTTATCACACAGTCTTTGATTTTGGTAAATCGAGAGTTGGATTTGC TAAAGCAGCATAGGGAATGGTCTTGTGTCTCAGAATATAGTGATCAACTTTATTTGCTTTTAGTTTACTGTTTACATACC CTTGCAATTCATATAATAGACCTAAAGTTCAGGGCTTGTATATAGTAACACCTTGGATGTCTCTCCCTCATGAATGAACA AAACTTGACCATGAGCTTTATACTCATCCTAACTTTGTCCCTTTTTTAACCACGAGTTCTAGTTTCATTTGTTCTTCTGC AACTTGGAACTAGTAGTTATCAAAAATGGACAACAATACCCGTTGAAGATAAATAAAGGTTATGATAAGCAAAGGTTTTA GTATATATTTGAAAATAAAAGATGAAAGGAAAGATAATATAAATATTTGTTGTTTTGTATGATATCATCCAAAATTATAA ATATTTATTAATTTGCTGAGATTCCACCTTGTAAATCAACTCCTAAACCTAATTGGGCCCGTACTTAGTGCATCCCCTCC AGCACTTTCAAAA
CDS sequence (LotjaGi4g1v0012200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAAGAAACAAGTTGCTATGTTTGTTTGTGTCAACCCTGTTGTTGCTTTCTGTGGTGTCATGTGCACCCAATGATGA TGGGCTGCACAGGATTGGACTGAAAAAGATTAAACTGGACAGAAACAACAGGCTTGCTGGTAGAATTGGAACCAAGGAAT CTGAGTCTTTTAGAGCTTCCATTAGAAAGTATCACCTCCAAAACAACTTTGTTGACACTGAGGAAACTGATATTGTTGCC TTGAAGAATTACTTGGATGCTCAGTATTATGGTGAAATATCCATTGGAACCTCTCCTCAGAAATTCACTGTTATTTTCGA CACCGGAAGCTCGAACTTGTGGGTTCCATCATCTAAATGTACCTTCTCGGTTGCATGCTACTTCCATGCCAAGTACAAGT CCAGCAGATCAAGTACTTATAAGAAAAATGGGACTGCTGCTGCAATTCAATATGGTACTGGAGCAATTTCTGGTTTCTTT AGTTATGACAGCGTTAAAGTTGGTGACATAGTTGTAAAGAACCAGGAATTTATTGAAGCAACTAAGGAGCCTAGTGTTAC ATTTTTGGTGGCCAAGTTCGATGGTATACTTGGGCTTGGATTTAAAGAGATATCAGTTGGAAATGCTGTTCCAGTGTGGT ACAATATGGTTGAACAAGGTCTTATCAAGGAGCCTGTATTTTCGTTTTGGCTCAACCGTAAACCAGAGGAAGAGGAAGGC GGTGAGATTGTTTTTGGTGGTGTTGATCCTGCCCACTACAAGGGAAATCACACTTACGTGCCTGTGACAAGAAAAGGATA TTGGCAGTTTGACATGGGAGATGTACTCATTGACGGTAAATCAACTGGATATTGCGCTGATGGATGTTCAGCCATTGCGG ACTCAGGAACTTCTTTATTGACAGGTCCAACGACTGTGATTACCATGATAAACCATGCAATTGGAGCATCTGGAGTTGTA AGCACAGAATGCAAAGCCATTGTTGCGGAGTATGGACAGACAATCATTGACCTGCTTTTGGCTGATGCAGAGCCCAAGAA GGTCTGCTCCCAAATTGGATTGTGCACTTTTGATGGGACTCATGGTGTTAATGGGGGTATCGAGAGCGTAGTGGATGAGA ATGATAGAAAATCGTCTGGCCGTGGTCTTCATGGTGCTGGTTGTTCTGCTTGTGAGATGGCGGTTGTTTGGATGCAGAAT CAGCTGGGCCAAAATCAGACACGAGATCAGATACTAAGCTATATCAATAACCTTTGTGATAAAATGCCTAGTCCAATGGG AGAATCAGCTGTTGACTGTGGGAGTATCTCTTCTCTGCCTGTCATTTCCTTGACAATTGGTGGAAGAACTTTTGATCTTG GTCCAGAGGAGTACATACTCAAAGTGGGAGAAGGTCCTGCGGCTCAGTGCATTAGCGGCTTTACTGCTATGGATATTCCT CCTCCACGTGGACCTCTCTGGATCCTTGGAGATGTGTTCATGGGGCGTTATCACACAGTCTTTGATTTTGGTAAATCGAG AGTTGGATTTGCTAAAGCAGCATAG
Protein sequence (LotjaGi4g1v0012200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGRNKLLCLFVSTLLLLSVVSCAPNDDGLHRIGLKKIKLDRNNRLAGRIGTKESESFRASIRKYHLQNNFVDTEETDIVA LKNYLDAQYYGEISIGTSPQKFTVIFDTGSSNLWVPSSKCTFSVACYFHAKYKSSRSSTYKKNGTAAAIQYGTGAISGFF SYDSVKVGDIVVKNQEFIEATKEPSVTFLVAKFDGILGLGFKEISVGNAVPVWYNMVEQGLIKEPVFSFWLNRKPEEEEG GEIVFGGVDPAHYKGNHTYVPVTRKGYWQFDMGDVLIDGKSTGYCADGCSAIADSGTSLLTGPTTVITMINHAIGASGVV STECKAIVAEYGQTIIDLLLADAEPKKVCSQIGLCTFDGTHGVNGGIESVVDENDRKSSGRGLHGAGCSACEMAVVWMQN QLGQNQTRDQILSYINNLCDKMPSPMGESAVDCGSISSLPVISLTIGGRTFDLGPEEYILKVGEGPAAQCISGFTAMDIP PPRGPLWILGDVFMGRYHTVFDFGKSRVGFAKAA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_NEGATIVE | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 22 | 22 | - | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| ProSiteProfiles | 1 | 22 | 22 | 6.0 | – | |
| SignalP_GRAM_POSITIVE | 1 | 23 | 23 | - | – | |
| SignalP_EUK | 1 | 22 | 22 | - | – | |
| Phobius | 6 | 17 | 12 | - | – | |
| PANTHER | 7 | 511 | 505 | 6.7E-166 | ||
| PANTHER | 7 | 511 | 505 | 6.7E-166 | – | |
| SUPERFAMILY | 14 | 513 | 500 | 2.82E-120 | ||
| Phobius | 18 | 22 | 5 | - | – | |
| Phobius | 23 | 514 | 492 | - | – | |
| Gene3D | 30 | 247 | 218 | 2.4E-72 | ||
| CDD | 79 | 512 | 434 | 0.0 | ||
| Pfam | 88 | 513 | 426 | 8.0E-135 | ||
| ProSiteProfiles | 89 | 511 | 423 | 74.227 | ||
| PRINTS | 95 | 115 | 21 | 9.9E-29 | ||
| ProSitePatterns | 104 | 115 | 12 | - | ||
| PRINTS | 241 | 254 | 14 | 9.9E-29 | ||
| PRINTS | 291 | 302 | 12 | 9.9E-29 | ||
| ProSitePatterns | 291 | 302 | 12 | - | ||
| Gene3D | 318 | 423 | 106 | 3.3E-32 | – | |
| ProSiteProfiles | 319 | 359 | 41 | 13.012 | ||
| SUPERFAMILY | 320 | 423 | 104 | 3.07E-25 | ||
| Pfam | 322 | 355 | 34 | 1.5E-12 | ||
| ProSiteProfiles | 384 | 425 | 42 | 10.937 | ||
| Pfam | 387 | 423 | 37 | 1.0E-13 | ||
| PRINTS | 487 | 502 | 16 | 9.9E-29 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Aspartic-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile. | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Biological process | Lipid metabolic process | The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids. |
Expression pattern of LotjaGi4g1v0012200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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