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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0013500 |
| Transcript ID | LotjaGi4g1v0013500.1 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glucan endo-1,3-beta-glucosidase 1; TAIR: AT1G11820.2 O-Glycosyl hydrolases family 17 protein; Swiss-Prot: sp|O65399|E131_ARATH Glucan endo-1,3-beta-glucosidase 1; TrEMBL-Plants: tr|I1KNE6|I1KNE6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0013500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:1705760..1709920) extracted from Lotus japonicus Gifu genome v1.2.
AAATCTTGTGGAGCACAGAAAAGCAGTAAAGTCTGAGAACAGTACTGGGACGTGAGTGCCATCCATTCCAGTTGGCATTT GCAGCTAAATCTCTCTTCCCCTTTAACCCTCCCTCTACTCCTCTACTCTCTAGAATTTCCTCTTCCTCTGTTAGGTCACC ACCTAACCATAAAAACAATATTCAACCCCAAAAAGAAAACAAAAAGCCAAAAAAGAAAACCACCTTTTTTTGATGAGATA ATCTGATAATGCAAGGTTCTGTAGCTGAATCAGAAGCAGAGGATGATGCATTGAAGTGGAATAAGCTCCTTTTCAACTCC AATGGCAAACACTAAGCTCATCCTTCTCCTCCTTCACATCCTCTTCCTTTCCACTTCATCACTAGGTAAAATCAAACACT TCCCAAACAAACTCTTCAACTTTTGTAATATTAGCAAGTAGCAACCGCCACAAACTTAACTCTGCTTCTTCTTCTTCTCT CTGCTTTTGCATTAATTTCAGCAGCTCAAGTGTCACATTCACATTCCAATGCTCATCCTTTCCAAAATGAACAAGCTGAA GCTGAAGAAGAAGAAGAGAAAGTACCATTCGTGGGTGTGAACATTGGCACAGACGTAGCAAATCTCCCACCAGCTTCAGA GATAGTGGCGTTTTTGCAGACACAGAAAATCACACACATTCGTGTCTACGACGCCAACACAGAAATCCTCAAAGCCCTTT CCGGTACCAAAATTCGCGTCATCATCTCCATCCCCAACAACCAGCTTCTCGCCATCGGCTCCTCCAACACCACCGCCGCT TCATGGATCGGCCGCAACGTCGTCGCTTTCTACCCACAAACCCTCATCACCGGAATCTCCGTCGGCGACGAGGTTCTCAC CACCGTCCCCTCCTCCGGCCCTCTCCTCCTCCCCGCAATGCAATCCCTCTACTCCGCCCTCGTCGCCTCCAACCTCCACC AGCAAATCAAAATCTCCACCCCTCACGCCGCCTCCATCATCCTCGACCCTTTCCCACCTTCCCAAGCTTTCTTCAACCAA ACCTTCTCCTCTGTGATTCTCCCTCTGCTTCAGTTTCTCTCCAAAACTGAGTCCCCTTTGATGATGAATCTTTACCCTTA CTATGTCTACATGGAGAACAAGGGTGTGGTTCCTCTGGACAATGCTTTGTTCAAACCTGTAACACCTAATAAGGAAATGG TGGATCCCAACACCTTGCTTCACTATACCAATGTGCTCGACGCGATGATCGACGCTGCTTATTTCTCCATGAGGATTCTC AATGTCACTGATGTTGTTGTTCTTGTGACAGAAACAGGATGGCCTTCAAAGGGTGATTCTAAAGAGCCTTATGCTACAAA AGACAATGCTGACACTTATAATTCCAATTTGATAAGGCATGTTTTCGATCGTAGCGGAACCCCTTTGCATCCGGAAACTA CTTCCAGTGTGTTTATCTATGAGCTTTTTAATGAGGATTTGAGGTCTCCGCCGGTTTCGGAGGCCAATTGGGGGCTGTTT TATGCCAACACTACGGCGGCGTATTTGCTTCATGTGTCCGGGATAGGGAGTTTTATGGCGAACGACACGACCAACCAGAC TTACTGCATTGCCATGGAGGGCTTTGATACCAAGACATTGCAGGCCGCGCTGGATTGGGCGTGTGGGCCGGGGAGGGCGA ATTGCTCGGAGATTCAGCCCGGAGAGAGTTGCTACCAGCCTAACAATGTGAAGGGGCATGCCTCTTATGCGTTTGATAGC TATTTCCAGAAAGAAGAGAAGGCTGCTGGGACTTGTGACTTCAATGGAGTAGCTATGATCACTACCACAGACCCCAGTAA GTGCCTGCATACAAGAATTCTACAGTTTTTTTTATTTTATTTTATCAATTTAGTGTTTTGATGTTGCCATGGTGTTCAAT TATGCTGTTAAGCTTGATTCTTGATTGAAATTTGCTGCTAATTGATGCATGAGGAATCTGGAGCTTCAAAATTACATAGT GAATGTTTGGATACTCGTTTGAAAATTATGGTGAAGCCAAAATAATGGTCAATAGAAGCCACTTCCCTTAGTTTTTGCTT CTATCTACCACGATTTTGGCTTTACCGTATTTTCAAACATGCACATATTGACTTATGCAGGGTTTATAAGAGTTCATTTG AACTTATCTCATATCATAAACACTTATGCGAGTGCTTAGTAAGGTTACGAAAATAGCTTATGATCTACCTAGTTTTTTTG AGCTTATTTTAAAAAGTTTTTAATGGTTAAATGACAGAAATATAAACAAAAGCAGAAAAATAAAGGGAAGAATTCAGAAA AAATTGGAGAAGAAGGTGTTAGAAGTCCCACATTGCCTAGAGATAAGGCCAATCAAGTGTTTATAAGGGTTGTGCAAACC TCAACTCTTGAGCTAGCTTTTGTGGTTGAGTATAGGCCTCCCAATTTCTAATATGGTATCAGAGCCTATCCTAGATCCAT TTGTTGTGTGGAGACCTCCCATATTTGGGCCACCCGTTGTTGTTCCCACGTTCCAGTCTGTTCAATCCTGGACGTGAGGG GGTGTGTTAGAAGTCCCACATTGCCTAGAGATAAGGCCAATCAAGTGTTTATAAGGGTTGTGCAAACCTCAACTCTTGAG CTAGCTTTTGTGGTTGAGTATAGGCCTCCCAATTTCTAATAGAAGGATCTACATTGATAATACTTGAAACTTGCAGAAAA CAAACTAAGCTTCTAGCAATCGTTATCAGATTAACTTGAATAAGTGCTTATACCTATCTATAAGTTATTTCGAGCTTGTT TTGATAAGCTTCTGTATAGGCACTTATAAGTTTTTTTTTGCCAAAAGTGCCTAATTACATTTACTCAAGCTCACCCTCGG TCCTTGAGGAAGAAAGGCCAACATCTTTTCATTTTTATTCCCTATTTTCATGTGGCTATGTTATGCGTTTAAAATCCTTC TTGTTTTGCCTAATTAGGTTACTTTGTGGTAATAAAGTAGAATTAACCTTTAAAGAGTAATGAAATGGAAGTCTTTGTGT TTTTATTTTTTCTGTAAGTAGGAAAGTAAAAAGTCTTGTGTTGTGACTACTGTAAGAAACTTTAAGATTGGAAAAGGGGT GATGATTTATGATTTAAATATAGAACTATGGCGAGGTAATGATTCCTGAAATGAAATGCATTTGTGTGGCACCCACACAC TTCAAAAGCACTTTTTATGTAAAAAATTGAAATTGAAATGAAAAAAGTGCTTTGCCATAGAGTAGTACCCACACTCCATG AGTTGGATGTTGGTTTGTCATTTTGTCTGAGAGCACCTTGTTTCCCTGACAATTGCAAAGATTCTGGACCGTGTTTCTAG ATTACCTTCACATAGTACTAATTTTACTTGCCTTCCAATTTTTCACTGGTATATAACACTTGTGACTATTTTGCATGTTT TTCTCTTTGTTGTGTTGTGTCTATTTCAGGTATAACACTTGTGACTAATATTATTTTTTGTTTTTTGTGGGGAATACCTT TGCAGGTCACGGGAGCTGTATATTTCCTGGAAGGTAAGAAACCTTGTCTTTGTTTTATTATCCTCAAAATCTGAATAGTG GAATTTTTATTTAACAAGTGTGAGTCTTTACCTAAGTGTGATTCCTCACTCTATGTGATGCAGCAAGAAAGTAAGCAACG AGACAAAGGAAGTGGTGAACTCTACACAATCAAGCAATGCAGGGGAGAAGTTAAGGTTCAGAGCAACCTTCAGCAGCATC AAAACAAATGTAGTTAACAACATTTTGCACATTTTATTGGCTGCATATCTCCCCACTTTGTTGTTAGTCCTTTTGTAAGG TGCAAATAATTCAATTTTATTCTTCTTTTTTGGGATTTTGAATTTGTTAGAGTTAAGGATAAGATCATAAGAGAAAAGCA ATTGTGGATGATCTGCAGGTCTAAACTTAGTGTTTATGGATATGATTGACGCTTCCTTTTTTAATAAAGTAGGTTGAATA ACATAGTGTTTATGAATATGATAGATGCTTCAGTAGGGAGATTGATCTTGTAATTAACCTATGTATTTCATGAAATATTT GTTAATCAGTTTGTTTAGGATATGCATAACAATGTGACCATCGTCATTTTGTCACTACGTGACCTACTTCGATCTCGTCC T
CDS sequence (LotjaGi4g1v0013500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAAACACTAAGCTCATCCTTCTCCTCCTTCACATCCTCTTCCTTTCCACTTCATCACTAGCAGCTCAAGTGTCACA TTCACATTCCAATGCTCATCCTTTCCAAAATGAACAAGCTGAAGCTGAAGAAGAAGAAGAGAAAGTACCATTCGTGGGTG TGAACATTGGCACAGACGTAGCAAATCTCCCACCAGCTTCAGAGATAGTGGCGTTTTTGCAGACACAGAAAATCACACAC ATTCGTGTCTACGACGCCAACACAGAAATCCTCAAAGCCCTTTCCGGTACCAAAATTCGCGTCATCATCTCCATCCCCAA CAACCAGCTTCTCGCCATCGGCTCCTCCAACACCACCGCCGCTTCATGGATCGGCCGCAACGTCGTCGCTTTCTACCCAC AAACCCTCATCACCGGAATCTCCGTCGGCGACGAGGTTCTCACCACCGTCCCCTCCTCCGGCCCTCTCCTCCTCCCCGCA ATGCAATCCCTCTACTCCGCCCTCGTCGCCTCCAACCTCCACCAGCAAATCAAAATCTCCACCCCTCACGCCGCCTCCAT CATCCTCGACCCTTTCCCACCTTCCCAAGCTTTCTTCAACCAAACCTTCTCCTCTGTGATTCTCCCTCTGCTTCAGTTTC TCTCCAAAACTGAGTCCCCTTTGATGATGAATCTTTACCCTTACTATGTCTACATGGAGAACAAGGGTGTGGTTCCTCTG GACAATGCTTTGTTCAAACCTGTAACACCTAATAAGGAAATGGTGGATCCCAACACCTTGCTTCACTATACCAATGTGCT CGACGCGATGATCGACGCTGCTTATTTCTCCATGAGGATTCTCAATGTCACTGATGTTGTTGTTCTTGTGACAGAAACAG GATGGCCTTCAAAGGGTGATTCTAAAGAGCCTTATGCTACAAAAGACAATGCTGACACTTATAATTCCAATTTGATAAGG CATGTTTTCGATCGTAGCGGAACCCCTTTGCATCCGGAAACTACTTCCAGTGTGTTTATCTATGAGCTTTTTAATGAGGA TTTGAGGTCTCCGCCGGTTTCGGAGGCCAATTGGGGGCTGTTTTATGCCAACACTACGGCGGCGTATTTGCTTCATGTGT CCGGGATAGGGAGTTTTATGGCGAACGACACGACCAACCAGACTTACTGCATTGCCATGGAGGGCTTTGATACCAAGACA TTGCAGGCCGCGCTGGATTGGGCGTGTGGGCCGGGGAGGGCGAATTGCTCGGAGATTCAGCCCGGAGAGAGTTGCTACCA GCCTAACAATGTGAAGGGGCATGCCTCTTATGCGTTTGATAGCTATTTCCAGAAAGAAGAGAAGGCTGCTGGGACTTGTG ACTTCAATGGAGTAGCTATGATCACTACCACAGACCCCAGTCACGGGAGCTGTATATTTCCTGGAAGCAAGAAAGTAAGC AACGAGACAAAGGAAGTGGTGAACTCTACACAATCAAGCAATGCAGGGGAGAAGTTAAGGTTCAGAGCAACCTTCAGCAG CATCAAAACAAATGTAGTTAACAACATTTTGCACATTTTATTGGCTGCATATCTCCCCACTTTGTTGTTAGTCCTTTTGT AA
Protein sequence (LotjaGi4g1v0013500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MANTKLILLLLHILFLSTSSLAAQVSHSHSNAHPFQNEQAEAEEEEEKVPFVGVNIGTDVANLPPASEIVAFLQTQKITH IRVYDANTEILKALSGTKIRVIISIPNNQLLAIGSSNTTAASWIGRNVVAFYPQTLITGISVGDEVLTTVPSSGPLLLPA MQSLYSALVASNLHQQIKISTPHAASIILDPFPPSQAFFNQTFSSVILPLLQFLSKTESPLMMNLYPYYVYMENKGVVPL DNALFKPVTPNKEMVDPNTLLHYTNVLDAMIDAAYFSMRILNVTDVVVLVTETGWPSKGDSKEPYATKDNADTYNSNLIR HVFDRSGTPLHPETTSSVFIYELFNEDLRSPPVSEANWGLFYANTTAAYLLHVSGIGSFMANDTTNQTYCIAMEGFDTKT LQAALDWACGPGRANCSEIQPGESCYQPNNVKGHASYAFDSYFQKEEKAAGTCDFNGVAMITTTDPSHGSCIFPGSKKVS NETKEVVNSTQSSNAGEKLRFRATFSSIKTNVVNNILHILLAAYLPTLLLVLL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 28 | 28 | - | – | |
| SignalP_EUK | 1 | 22 | 22 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 22 | 22 | - | – | |
| Phobius | 1 | 22 | 22 | - | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| Phobius | 6 | 17 | 12 | - | – | |
| Phobius | 18 | 22 | 5 | - | – | |
| Phobius | 23 | 511 | 489 | - | – | |
| PANTHER | 32 | 494 | 463 | 4.6E-256 | – | |
| PANTHER | 32 | 494 | 463 | 4.6E-256 | – | |
| Pfam | 52 | 371 | 320 | 7.4E-74 | ||
| Gene3D | 52 | 372 | 321 | 3.9E-110 | – | |
| SUPERFAMILY | 52 | 371 | 320 | 1.24E-79 | ||
| ProSitePatterns | 286 | 299 | 14 | - | ||
| SMART | 388 | 473 | 86 | 2.6E-48 | ||
| Pfam | 389 | 460 | 72 | 9.0E-20 | ||
| Phobius | 512 | 532 | 21 | - | – | |
| Phobius | 533 | 533 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi4g1v0013500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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