Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0013500 |
| Transcript ID | LotjaGi4g1v0013500.2 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glucan endo-1,3-beta-glucosidase 1; TAIR: AT1G11820.2 O-Glycosyl hydrolases family 17 protein; Swiss-Prot: sp|O65399|E131_ARATH Glucan endo-1,3-beta-glucosidase 1; TrEMBL-Plants: tr|I1KNE6|I1KNE6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0013500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:1705760..1709920) extracted from Lotus japonicus Gifu genome v1.2.
AAATCTTGTGGAGCACAGAAAAGCAGTAAAGTCTGAGAACAGTACTGGGACGTGAGTGCCATCCATTCCAGTTGGCATTT GCAGCTAAATCTCTCTTCCCCTTTAACCCTCCCTCTACTCCTCTACTCTCTAGAATTTCCTCTTCCTCTGTTAGGTCACC ACCTAACCATAAAAACAATATTCAACCCCAAAAAGAAAACAAAAAGCCAAAAAAGAAAACCACCTTTTTTTGATGAGATA ATCTGATAATGCAAGGTTCTGTAGCTGAATCAGAAGCAGAGGATGATGCATTGAAGTGGAATAAGCTCCTTTTCAACTCC AATGGCAAACACTAAGCTCATCCTTCTCCTCCTTCACATCCTCTTCCTTTCCACTTCATCACTAGGTAAAATCAAACACT TCCCAAACAAACTCTTCAACTTTTGTAATATTAGCAAGTAGCAACCGCCACAAACTTAACTCTGCTTCTTCTTCTTCTCT CTGCTTTTGCATTAATTTCAGCAGCTCAAGTGTCACATTCACATTCCAATGCTCATCCTTTCCAAAATGAACAAGCTGAA GCTGAAGAAGAAGAAGAGAAAGTACCATTCGTGGGTGTGAACATTGGCACAGACGTAGCAAATCTCCCACCAGCTTCAGA GATAGTGGCGTTTTTGCAGACACAGAAAATCACACACATTCGTGTCTACGACGCCAACACAGAAATCCTCAAAGCCCTTT CCGGTACCAAAATTCGCGTCATCATCTCCATCCCCAACAACCAGCTTCTCGCCATCGGCTCCTCCAACACCACCGCCGCT TCATGGATCGGCCGCAACGTCGTCGCTTTCTACCCACAAACCCTCATCACCGGAATCTCCGTCGGCGACGAGGTTCTCAC CACCGTCCCCTCCTCCGGCCCTCTCCTCCTCCCCGCAATGCAATCCCTCTACTCCGCCCTCGTCGCCTCCAACCTCCACC AGCAAATCAAAATCTCCACCCCTCACGCCGCCTCCATCATCCTCGACCCTTTCCCACCTTCCCAAGCTTTCTTCAACCAA ACCTTCTCCTCTGTGATTCTCCCTCTGCTTCAGTTTCTCTCCAAAACTGAGTCCCCTTTGATGATGAATCTTTACCCTTA CTATGTCTACATGGAGAACAAGGGTGTGGTTCCTCTGGACAATGCTTTGTTCAAACCTGTAACACCTAATAAGGAAATGG TGGATCCCAACACCTTGCTTCACTATACCAATGTGCTCGACGCGATGATCGACGCTGCTTATTTCTCCATGAGGATTCTC AATGTCACTGATGTTGTTGTTCTTGTGACAGAAACAGGATGGCCTTCAAAGGGTGATTCTAAAGAGCCTTATGCTACAAA AGACAATGCTGACACTTATAATTCCAATTTGATAAGGCATGTTTTCGATCGTAGCGGAACCCCTTTGCATCCGGAAACTA CTTCCAGTGTGTTTATCTATGAGCTTTTTAATGAGGATTTGAGGTCTCCGCCGGTTTCGGAGGCCAATTGGGGGCTGTTT TATGCCAACACTACGGCGGCGTATTTGCTTCATGTGTCCGGGATAGGGAGTTTTATGGCGAACGACACGACCAACCAGAC TTACTGCATTGCCATGGAGGGCTTTGATACCAAGACATTGCAGGCCGCGCTGGATTGGGCGTGTGGGCCGGGGAGGGCGA ATTGCTCGGAGATTCAGCCCGGAGAGAGTTGCTACCAGCCTAACAATGTGAAGGGGCATGCCTCTTATGCGTTTGATAGC TATTTCCAGAAAGAAGAGAAGGCTGCTGGGACTTGTGACTTCAATGGAGTAGCTATGATCACTACCACAGACCCCAGTAA GTGCCTGCATACAAGAATTCTACAGTTTTTTTTATTTTATTTTATCAATTTAGTGTTTTGATGTTGCCATGGTGTTCAAT TATGCTGTTAAGCTTGATTCTTGATTGAAATTTGCTGCTAATTGATGCATGAGGAATCTGGAGCTTCAAAATTACATAGT GAATGTTTGGATACTCGTTTGAAAATTATGGTGAAGCCAAAATAATGGTCAATAGAAGCCACTTCCCTTAGTTTTTGCTT CTATCTACCACGATTTTGGCTTTACCGTATTTTCAAACATGCACATATTGACTTATGCAGGGTTTATAAGAGTTCATTTG AACTTATCTCATATCATAAACACTTATGCGAGTGCTTAGTAAGGTTACGAAAATAGCTTATGATCTACCTAGTTTTTTTG AGCTTATTTTAAAAAGTTTTTAATGGTTAAATGACAGAAATATAAACAAAAGCAGAAAAATAAAGGGAAGAATTCAGAAA AAATTGGAGAAGAAGGTGTTAGAAGTCCCACATTGCCTAGAGATAAGGCCAATCAAGTGTTTATAAGGGTTGTGCAAACC TCAACTCTTGAGCTAGCTTTTGTGGTTGAGTATAGGCCTCCCAATTTCTAATATGGTATCAGAGCCTATCCTAGATCCAT TTGTTGTGTGGAGACCTCCCATATTTGGGCCACCCGTTGTTGTTCCCACGTTCCAGTCTGTTCAATCCTGGACGTGAGGG GGTGTGTTAGAAGTCCCACATTGCCTAGAGATAAGGCCAATCAAGTGTTTATAAGGGTTGTGCAAACCTCAACTCTTGAG CTAGCTTTTGTGGTTGAGTATAGGCCTCCCAATTTCTAATAGAAGGATCTACATTGATAATACTTGAAACTTGCAGAAAA CAAACTAAGCTTCTAGCAATCGTTATCAGATTAACTTGAATAAGTGCTTATACCTATCTATAAGTTATTTCGAGCTTGTT TTGATAAGCTTCTGTATAGGCACTTATAAGTTTTTTTTTGCCAAAAGTGCCTAATTACATTTACTCAAGCTCACCCTCGG TCCTTGAGGAAGAAAGGCCAACATCTTTTCATTTTTATTCCCTATTTTCATGTGGCTATGTTATGCGTTTAAAATCCTTC TTGTTTTGCCTAATTAGGTTACTTTGTGGTAATAAAGTAGAATTAACCTTTAAAGAGTAATGAAATGGAAGTCTTTGTGT TTTTATTTTTTCTGTAAGTAGGAAAGTAAAAAGTCTTGTGTTGTGACTACTGTAAGAAACTTTAAGATTGGAAAAGGGGT GATGATTTATGATTTAAATATAGAACTATGGCGAGGTAATGATTCCTGAAATGAAATGCATTTGTGTGGCACCCACACAC TTCAAAAGCACTTTTTATGTAAAAAATTGAAATTGAAATGAAAAAAGTGCTTTGCCATAGAGTAGTACCCACACTCCATG AGTTGGATGTTGGTTTGTCATTTTGTCTGAGAGCACCTTGTTTCCCTGACAATTGCAAAGATTCTGGACCGTGTTTCTAG ATTACCTTCACATAGTACTAATTTTACTTGCCTTCCAATTTTTCACTGGTATATAACACTTGTGACTATTTTGCATGTTT TTCTCTTTGTTGTGTTGTGTCTATTTCAGGTATAACACTTGTGACTAATATTATTTTTTGTTTTTTGTGGGGAATACCTT TGCAGGTCACGGGAGCTGTATATTTCCTGGAAGGTAAGAAACCTTGTCTTTGTTTTATTATCCTCAAAATCTGAATAGTG GAATTTTTATTTAACAAGTGTGAGTCTTTACCTAAGTGTGATTCCTCACTCTATGTGATGCAGCAAGAAAGTAAGCAACG AGACAAAGGAAGTGGTGAACTCTACACAATCAAGCAATGCAGGGGAGAAGTTAAGGTTCAGAGCAACCTTCAGCAGCATC AAAACAAATGTAGTTAACAACATTTTGCACATTTTATTGGCTGCATATCTCCCCACTTTGTTGTTAGTCCTTTTGTAAGG TGCAAATAATTCAATTTTATTCTTCTTTTTTGGGATTTTGAATTTGTTAGAGTTAAGGATAAGATCATAAGAGAAAAGCA ATTGTGGATGATCTGCAGGTCTAAACTTAGTGTTTATGGATATGATTGACGCTTCCTTTTTTAATAAAGTAGGTTGAATA ACATAGTGTTTATGAATATGATAGATGCTTCAGTAGGGAGATTGATCTTGTAATTAACCTATGTATTTCATGAAATATTT GTTAATCAGTTTGTTTAGGATATGCATAACAATGTGACCATCGTCATTTTGTCACTACGTGACCTACTTCGATCTCGTCC T
CDS sequence (LotjaGi4g1v0013500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAAACACTAAGCTCATCCTTCTCCTCCTTCACATCCTCTTCCTTTCCACTTCATCACTAGCTCAAGTGTCACATTC ACATTCCAATGCTCATCCTTTCCAAAATGAACAAGCTGAAGCTGAAGAAGAAGAAGAGAAAGTACCATTCGTGGGTGTGA ACATTGGCACAGACGTAGCAAATCTCCCACCAGCTTCAGAGATAGTGGCGTTTTTGCAGACACAGAAAATCACACACATT CGTGTCTACGACGCCAACACAGAAATCCTCAAAGCCCTTTCCGGTACCAAAATTCGCGTCATCATCTCCATCCCCAACAA CCAGCTTCTCGCCATCGGCTCCTCCAACACCACCGCCGCTTCATGGATCGGCCGCAACGTCGTCGCTTTCTACCCACAAA CCCTCATCACCGGAATCTCCGTCGGCGACGAGGTTCTCACCACCGTCCCCTCCTCCGGCCCTCTCCTCCTCCCCGCAATG CAATCCCTCTACTCCGCCCTCGTCGCCTCCAACCTCCACCAGCAAATCAAAATCTCCACCCCTCACGCCGCCTCCATCAT CCTCGACCCTTTCCCACCTTCCCAAGCTTTCTTCAACCAAACCTTCTCCTCTGTGATTCTCCCTCTGCTTCAGTTTCTCT CCAAAACTGAGTCCCCTTTGATGATGAATCTTTACCCTTACTATGTCTACATGGAGAACAAGGGTGTGGTTCCTCTGGAC AATGCTTTGTTCAAACCTGTAACACCTAATAAGGAAATGGTGGATCCCAACACCTTGCTTCACTATACCAATGTGCTCGA CGCGATGATCGACGCTGCTTATTTCTCCATGAGGATTCTCAATGTCACTGATGTTGTTGTTCTTGTGACAGAAACAGGAT GGCCTTCAAAGGGTGATTCTAAAGAGCCTTATGCTACAAAAGACAATGCTGACACTTATAATTCCAATTTGATAAGGCAT GTTTTCGATCGTAGCGGAACCCCTTTGCATCCGGAAACTACTTCCAGTGTGTTTATCTATGAGCTTTTTAATGAGGATTT GAGGTCTCCGCCGGTTTCGGAGGCCAATTGGGGGCTGTTTTATGCCAACACTACGGCGGCGTATTTGCTTCATGTGTCCG GGATAGGGAGTTTTATGGCGAACGACACGACCAACCAGACTTACTGCATTGCCATGGAGGGCTTTGATACCAAGACATTG CAGGCCGCGCTGGATTGGGCGTGTGGGCCGGGGAGGGCGAATTGCTCGGAGATTCAGCCCGGAGAGAGTTGCTACCAGCC TAACAATGTGAAGGGGCATGCCTCTTATGCGTTTGATAGCTATTTCCAGAAAGAAGAGAAGGCTGCTGGGACTTGTGACT TCAATGGAGTAGCTATGATCACTACCACAGACCCCAGTCACGGGAGCTGTATATTTCCTGGAAGCAAGAAAGTAAGCAAC GAGACAAAGGAAGTGGTGAACTCTACACAATCAAGCAATGCAGGGGAGAAGTTAAGGTTCAGAGCAACCTTCAGCAGCAT CAAAACAAATGTAGTTAACAACATTTTGCACATTTTATTGGCTGCATATCTCCCCACTTTGTTGTTAGTCCTTTTGTAA
Protein sequence (LotjaGi4g1v0013500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MANTKLILLLLHILFLSTSSLAQVSHSHSNAHPFQNEQAEAEEEEEKVPFVGVNIGTDVANLPPASEIVAFLQTQKITHI RVYDANTEILKALSGTKIRVIISIPNNQLLAIGSSNTTAASWIGRNVVAFYPQTLITGISVGDEVLTTVPSSGPLLLPAM QSLYSALVASNLHQQIKISTPHAASIILDPFPPSQAFFNQTFSSVILPLLQFLSKTESPLMMNLYPYYVYMENKGVVPLD NALFKPVTPNKEMVDPNTLLHYTNVLDAMIDAAYFSMRILNVTDVVVLVTETGWPSKGDSKEPYATKDNADTYNSNLIRH VFDRSGTPLHPETTSSVFIYELFNEDLRSPPVSEANWGLFYANTTAAYLLHVSGIGSFMANDTTNQTYCIAMEGFDTKTL QAALDWACGPGRANCSEIQPGESCYQPNNVKGHASYAFDSYFQKEEKAAGTCDFNGVAMITTTDPSHGSCIFPGSKKVSN ETKEVVNSTQSSNAGEKLRFRATFSSIKTNVVNNILHILLAAYLPTLLLVLL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 31 | 31 | - | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 22 | 22 | - | – | |
| Phobius | 1 | 22 | 22 | - | – | |
| SignalP_EUK | 1 | 22 | 22 | - | – | |
| Phobius | 6 | 17 | 12 | - | – | |
| Phobius | 18 | 22 | 5 | - | – | |
| Phobius | 23 | 510 | 488 | - | – | |
| PANTHER | 30 | 493 | 464 | 4.1E-256 | – | |
| PANTHER | 30 | 493 | 464 | 4.1E-256 | – | |
| Pfam | 51 | 370 | 320 | 7.4E-74 | ||
| SUPERFAMILY | 51 | 370 | 320 | 1.24E-79 | ||
| Gene3D | 51 | 371 | 321 | 3.9E-110 | – | |
| ProSitePatterns | 285 | 298 | 14 | - | ||
| SMART | 387 | 472 | 86 | 2.6E-48 | ||
| Pfam | 388 | 459 | 72 | 9.0E-20 | ||
| Phobius | 511 | 531 | 21 | - | – | |
| Phobius | 532 | 532 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi4g1v0013500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…