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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0017900 |
| Transcript ID | LotjaGi4g1v0017900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 8-amino-7-oxononanoate synthase; TAIR: AT5G23670.1 long chain base2; Swiss-Prot: sp|Q2R3K3|LCB2A_ORYSJ Long chain base biosynthesis protein 2a; TrEMBL-Plants: tr|Q852R1|Q852R1_LOTJA Serine palmitoyltransferase; Found in the gene: LotjaGi4g1v0017900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:2265393..2275274) extracted from Lotus japonicus Gifu genome v1.2.
ATTTTGAGTGCATCTTTGTTGACCAGTGAATGAAATGATTAACATTGAATCCAGCGTGGACTTTTCCATTTTTCTATTGT ACGGTCCCATTTCATTCCATTTCCATCTCATATCTCATCATACACATTCCAACTCTCTCTTTCTCTCTCTCTTCTCCCCT CGACGAGTCCGCGAACGAGACTCGGGTTCGGATCTCTGATCGCTGCTTCCTGGCGGTTCCCAAATCTCAGAATCCAGATC CTTCTCTCGCCGCCGGCGCTTCCGAATCCCCATTCCACCACTGAAACCTACCGGAACAACACAAGATGATAGCTATTCCA TATTTGACTGCATTAACCACCTACTTCAGCTACGGTTTGCTCTTCGCCTTCGGTCAATTCAGGGATTTCTTCCGCAAAAT CTTCGACTGGTGCAGCTCCAACAATCTTCAGGCACGCGCCTTTTCTCAATCTCTTTCTTTCTTTCTTGAATTTCTCAATT TCTGCATATATATATATATTGTTTCTCAATTTGCGCCTTGTTTGTTTCTTACTACCAGGGTTACGCTCCGATCTGCTTAG GTCTCGAAGATTTTTACATTCGCCGATTGTACCTTCGGATTCAGGTACGTTCAATCAAATTTCAACCGCGCTTCACTTTC GGTTTTTTCTCCCGTTTTGGATGTGGATTTGTGTTGTGATTTGTTACGATATATTAGGGGTGCCTATATAAATAGGCTTA GGCCTTGTAGAATAGTTATGTTGTGATTGATATCCTGTAATGGAACCCTTCTTCCCCCTGTTTCTCTATTCTTTCTCTGA TTCTATCTTCTTCTTTCCCTATCTCTAATTCTATCCCTAACATGATTTCTGTGTGACAAACCAACAAAAGCAAGTGTGCG TGCTCATTTCTGTGTAAATTTTGAAGTGGTTATTACTTTTTTGGCAGGACTGTTTTGGAAGACCGATAGCTAGTGCTCCT GATGCTTGGTTTGATGTAGTTGAACGCTACTCCAATGATAATAACAAGACACTAAAGTATGATTCTCTTTAATTCTCAGG CTTATGATTATGGCTTTATTTTTATTTTTAATTTTTTGATGGGAGGGATGCATATTTTTTGAAGATATAGTTAATAGTTG GAGAGTCAAGATAAGAAATAATTGAAAAATTTGAGCTGTGGAATTAGCCTTTGGAAATGCTTGCCTAAGTAGAAGTGAAT GAATGGCATGGAATGCAATGCAAGTTTAGCAAAAGGCGAACGATTCTTAATGTAGAGGTGGAAATTGGTGAACATAGATA CAACTCTCATATTTTAAGTATATTTGGGTCCGTTTCCAAACAGGCAGGGTGAAATAGATGAATATTTGCGTGTGATCTAC GACAGACAAGTAACACTCGAGTTCAGAGGGAAAGTGTACCAATCAACTATTAGACTGTCAATGTTATTTGGGGCTGAATG TTGGGTGTTAAAGAGTAAACAAAGAAGAAAAGTGTCGCTTAGATGAGAATGTTGCAATGGGTAAGTGGTTAAATAAAACA AGATAGGATTAAGAATACTATTATTAGATAGAAAACCAAAGCAGCTGACATTATAAAAATTATGGCAGAGTCTCATCTTA GGTGGGTTAAGCATGCTTAGAAGACCTGCTGAACATCACTTAGGAGGGTTGGCTAGAGTCTAGAGCAAGGATATCCCATA CCAGTAGATAGATATAGAAGGATATCGATGAAAGTTACTGGTCACATCATTAATAGAGATTTTGAGTTTAACAGTTTATC TTTGAATTTAACACATGAAAGGGCATTATGGCATCATTTTGTCCATATAGCCTACTTGACCTTGGGGGGAAATGGCCTGG TTTTTGTTACTGTGGAAGCTTTAGCATCAAAAGTTTATCTAACAGCAATTTCTCCCTATGCAGACGAACTGATAAATTAA GTAGATGCCTTAACTTGGGATCATACAACTATCTTGGTTTTGCTGCGTCTGATGAATATTGCACGCCTCGAGTAATTGAT TCGTTGAAGAAGTATTCTCCAAGCACTTGCAGTGCCCGGGTGGATGGGGGTAGGTATTATTAGTTTGTTTTAGCCATTAA AATGAAGTTCAGTTTGCTTATTGGTGCATGTATCTTATCAAGTTTCCTCAATCATGGCTTCTTCAATAGGCACAACTGAT CTTCACAATGAATTGGAGGAGTGCGTTGCTAGTTTTGTTAGAAAGCCAGCTGCGTTGGTTTTTGGAATGGGCTATGTGAC AAATTCTGCAATTCTTCCTGTCCTGATGGGGAAGGTTGGTAAAATTTAGTGTTTTTACTCTTATGAGAGATGCTGATATT TGCATGATTATTCATTTCTGTAGTACTTTAACAGGGAAGTTTGATTATTAGTGATTCATTGAACCACAACTCAATTGTTA ACGGCGCACGAGGATCTGGAGCAACTATTCGTGTTTTCCAACACAATAGTGAGTACCTTTGCCGTTTACCAAAATAAGTT TTGTGAGTTAGTAATTTCCAAATGCTGTTATGAGAGTGTAACAAAACTGACATTGGATTGTTTATATGTATTTGGGTCAT ACTGGATTGCATTTTTTCGGTTTGCCTCTGCTAATATGATGTTGCTCTCATAGGCCACGTTATTATTTATTCACTTTGTC CCTGGCTATATATCTGCAGTGCCATCACATCTAGAAGAAGTATTACGAGAACAAATTGCTGAGGGACAGCCAAGGACGCA TAGGCCATGGAAGAAGATAATGGTTATTGTGGAGGGGATATATAGCATGGAAGGAGAGCTTTGTAAACTTCCAGAGATCA TAGCTATATGCAAAAAATACAAGGTTGGTTATTTCGGTAGCTCTAATACAATGTACAAATTGTTATTCTTACATACATTT TCCCGCAAGCATTTTTCTTTTCATTCTTTTTTTTTTGGGTGTGCGTGAGTATTTAATTTGAGTTTAAAATCCATAGCTTG TGAAAGTAATGTAGGGATGACATGGCATTTCCTGTAAAAGAAAATTTTGATTGGACTATTGTAAATGGTTTTACATCCTG GTAAATAGTGAGTTCCATTTAAATTAAAGCTAATGACTCATTGGCACAGTTAAAGAAAATCATTTCCCTCTAAAAGGATG TTTGTATTTAATGAATAGTTTCAGATGGTCTCATTCTCATATGACAACTTTTGATGGTTCTATTATTTTTTCTTCAAAAG TCTAGTTGAGAGAAGGGGAAAGAGAGGGCCAAATTATTGTGGGGTTTCCTTCATTTAATAATCCCATTCCCTTCTGAGCT GACATTAGGGATTGATTTGGATAAAGTTTTTAGGGTAAAGTATGTTTTTAGTCCCGATAAAATTGTCAATATTTGGTCTT AGTTTGATTTTTGAAAACTCCATTTTTGTCCCTTATTTTCTAAAAAACTCTATCTTTAGCTTTTGACCTTAAGAAAATGG TGAAGCACACCATACAAAAGGTGGTATCAAATTATCAATGCCAAACAACGTTTGGGGCACCACATTCATCCATTACAGTT GTATCAGGTCGCACTAAAACAAAAAGTAATAGTAAAAAAAGCATAGGTCGAGAACTAAAGTTAGACTATGCCATAAAATC GAAGACCAAAATGAGGCGTTATAAAAATCAGGGAGTAGAATCAAATAGTGACAATGCACAAATAAATACTTAACTCAAGT TTTGATGATGAAGTTTTATTTTCCATTTTAATTTGGTTTATTGGTACTTTTTCTATTATGGCACCGCATGGATGAGCTAT GTAGCCAACCTCGTCTAGTTTGAAAAGGCTTAATTTTTGTTATTGTATCGTTAGTTTTTGCATTCTTCCATTGCTTTCAT AGGCCTATACATATTTGGACGAAGCACACAGCATTGGAGCCGTGGGCAAGACAGGAAGAGGTGTTTGTGAGCTCTTGGGT GTTGATACTGCTGATATTGACATTATGATGGGAACATTCACGAAATCATTTGGATCATGTGGAGGTTATATTGCAGGATC TCAGGTATGCACATGTAAATATTAGACTCCAAATTTAGTGATTATATTAGGGTATAAATATTAGAAGTTTAGTTTTATTT TATTTTTATATTTTAGATTAAGCTTATTTTTTATTTTAGGAGTTATGTTTTTATTTTTGTTGGTCTATCTTCTTCTTTTC TTAGGGTTTAAGTTCATTGTTATTACGATTAGTTTATTATAAATAAGAGTTACCCTCCTTAGGTTAGAGTCATTATTTGA GTATTGAGTATTTTAAAAGGGTTTCACCCTTGTAAAAGGATTTTCCCTTTTTAAGAAGGTTTTCCTTCTTGGGTTCTTAT TTTCAGAATTAAGAGAAGTATTTTAATTCAGAAAATGACACCTATGTCCCTGTTTGGCTGTTAGGGATCCCCAACCCTAA CAGATTAACTGAGACTGTAAGTTACTAAAATCAGCCAGAATGGGTGTTAATTTGTCTTAGTGACAATCAGCCACTCTACA TTTTTCTTTCTGTATAAAATCAAGGGTTAAACATCATATTAGTCCCTGTCTTTGTGTCGCCGTCTGATCTAGGTCCCTCG CCGGAAAAATTATTGTAAATGGTCCTCATGTTTGAAATATTTTTGGAGCGGATCCTCGCCGGAGGTCGGAGCTCCGGTGA ATGCTTAAATGACATGCTGACTGGGATCAAAATGCTTATGTGGATTTTTAAACAAAAAAAATAAAAAATAAATTACACAT CATAAAATTTAAAAAATTAAAAAAACCCAAATTACCCCAAATTAATTAATTAAAATTAAACTTATTAAGTAAAAAATTAA AAACCCCAATTCTCCTAATACCTATTTTAATTCTGTCAAAACATCATCTTTCATTCTTCTTCATACTTGCTATTTTGAAA CATGGAACAAAAGGACAAAAAAATTCTTTCTAATTGCCGATAGGCTAAACCCCATTCAATTTGTGCTGGTGAATGAAATC CCAAATTAAAACTTGTTATTGATTCATCTATTTCATGGTCCTTGGTGAATCTAATTCAGTTATAGCAATTCCCTGCACTG ACACAATCAAAGCCATCAAATTTGTCTTCTGCACTTTCCCAGCATCCAAACAAGATATGCAGAACCTGTGCAGATGGGGA AAATCGCAAACCATGGGTGCGAACGGGTACCTTGGTGAGTCCAAACGAATCAAAATGAGAGAGCCCTCAACCTCTCCTCT TCCACTTCGCACGACAGAGCCCTCAACCTCTTTCTCGGCCTTCGATTCACATTTCACAGCAACACCAAGCGGTTGTTTGG TCTGGGTTCTTCTGGGTTTTGCTTCCATGCTTTTCATCTTCTCCTTCTCTCATAAACTCAGATCCAAACTTAGATTGGGG GGATTTCGGTTGGGGGTTGGGGTTTTGGTTTGGTTCCGATTGCAGGTGGGGTTGGGGTGGTTCCGATTGCAGGTGGGTGG GGGTTGGGGTTGAGGGGGTGTGGGTGCGGGTGAGGTTTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGGTGAGGTT GCAGGTGGGTGAGGGTGAGGGTGAGGGTGAGGGTGGGTGAGGCCGTGAGTGAGGTTGCAGGTGGATGGTAGAAGATGATG ATGATATTCTGGAAAATGATTCTGAGTTAGGGGATGGAGAAGAACTTAGATATGAACCCTAAATTGGTAGGGATAATTGA GAATTTGGGGTTAATTTGTGGAATTGAAATTAATCTGGGAAGGAAATGAATTTGTTAATTAATTATGTTTAATTTTAGTT AATTAGATTAATAAAACTGACATGTAATTTTTTTTTTTAATTTTTTTTATAATCCACGTCACCTCATTAAACCCAGTCAG CATGCTATTTAAGCACTCGCCGGAGCTCTGACATCCGGCGAGGATCCGCTCCAAAAATATTTCAAACATGAGGACCATTC ACAATAATTTTTCCGGCGAGGGACCTAGATCAGACGGCGACACAAAGACAGGGACTAATATGATGTTTAACCCTAAAATC AATAATAGGTTACAAAATGCGTTGTGATGAAGAGAAAAATGAAAGGACCTGTAGAATACAAGGAATGGGAGTGAACTTGG AAGTGTTTCTGAATGGTAGGTGGACCTAAAGAGATAGGAAACGGAGAACTGTGCAAGAAGTACTCCAGTATTGCTGAAGT ATCTGCATTGTATTTGCATCTGATGTACGAATACTTGTAAATTACATTTGTGCTATTGCTTTTTTACTGTGTGGACCGGA CACCCACACCTCCTAAACGTATTGCTACTTGGAAATTTTCCTCACCATTTACCTTCAAAAGAGAAATGTTTTCAATTTTA CAATCTTACCGAACTCGAAGTCATTGCATGGAATAATAAACATTTGTCTTAACAGAATGAACTATTATATTTATGATGGC AATTGCTGGCGATAGGCGAGGCAGAGTATCGTACTGGGCTTGGGAAGGAAAATGAACACGGGAGAGGGAGAGTACATGAG ACTTGGGGTTGGGATATAAATATAAGAATTAATATTCATTATATTAAATGTAACTTAAACTGCTGCATGGCCTGAACCTA TAACTTTTATTTATAAAAAAAATTGTAACTTATTTGTAAACAATTATCACATTGGCATATTGTATTGTATCCATGATATG GGATTCTTGTACCTAGCAAGATCCTTGCAACATTTCCTTGCAAAAGGAATGTATGGCCTGGTGTTAGAAAGGAAAGCGCA ACAGAAGTACATCCCCGAGGAATACCTTGAGCCCTGAGATTACTCTGTTCTCTCTACACAATTCGCTGTGTCTCTCCCCT GCTCTATATCCTTATATATCCATTTATCCCTTTCTAGGTCTTCCCCCCACTCCAGGACTGCAAGCTGTCCAGTTTGTTAT GCAGGAATTCCTCCTTACTATTTACTAATTACCTAAGCATTTGGCATTTCATCCTTTGCTGAAATAACCTCGTCCCCCTA CTATTTTGTCTTTCTTACATCTTAAACTGTGTTTACCGGGCCTTCCTTTCTTAACATATAGCTTCTTAATTGGAGGCCTA TTAGTTTCATACAGTTGAAATCATGTAATATTGCTGTATTATTGTGCTCGTGGAGTTGCTTTTTGTTTCACTTGTTTGGT TTTCATTTGCATTTATTAATTTCCATTTTCTGTTCTCATTTTTAATTACATAAATGTCATATTGTTTTTACTTTTCACTG TTTTATATTTTCAAAGTTTTGTACCGGAAACAGTGAAAACTAAAGTTTTCATTATTTCATACACAAAACTTTGAAATAAA AAAGTAAAATGAAACACTAGGTGGTATTTTTGTAATTAAAATTCAAAACAGGAAATAAAAACAAAATGTTTTTTTTTTAA ACCAATTAGGTCCAAAATTGTTTAAATTTGTGTTTCATATTGGTTTCTACCAGTTTGTATCAGCCATCCTGGAAATATCA TATCTAACAACTAGGACAATTTGAACTGTTTCTGATGTTGAATTTCTGGATTTCCTGTCAGGAGCTTATCCAATACTTGA AGTACACTTGCCCTGCTCATCTTTATGCAACTTCTGTTTCACCCCCTGCTGCACAACAGATAATATCATCCATAAAAGTA ATCCTTGGAGAGGATGGTTCCAATAGAGGTTTGGCTGGTTACATAATTTGCACTGACACAAAACAACATTTATATTATTT TGTTTAGTTTGCATTGAAGCAAATTGTTTCCGTTAGTATGGTTCCAATAGATGTTTGGCTGGTTACATCATTTGCACTGA CGCAAAACAGCATTTATATCATTTTGTTTTTGTATTGAAGTAAATTGTTTTCATACAGGTGCCCAGAAACTCGCAAAAAT TCGAGAAAATAGCAATTTTTTCAGGTCAGAACTGCAGAAGATGGGATTTGAGGTTCTTGGAGATAACGATTCTCCTGTAA TGCCAATCATGCTTTACAACCCAGCTAAAATTCCTGCCTTCTCAAGGGAGTGCCTCAGGCAGAATGTAAGAGCATCAACA TCATACTATTTATGCTCCTTGTTGGTGCTCTACATCGTGGATGCTAATAAAAATTTCAGTTAATGTTCGCAAGTTTTTGA ATGGTTCTGTGTTGTTTCAGGTTGCTGTTGTAACAGTGGCATTTCCTGCAACTCCATTGCTACTGGCTAGGGCACGCATA TGTATATCAGCTTCTCATTCAAGGGAAGACCTTGTGACTGCGTTGCAGGTGTGTAGTTTGAATTTCATTCAATGGGTTAA CTTTTCCAAAAAATGCATAATTAAATGGTTGTAAAGGCGTCAGTTTTGTGTAGAAGGGTAGCTGTGAAGTTTGTGTTACA TAATTTGAGTGTGTTATCCGTTGTTAAGTAAATTATTATCAAAATTGTTAACTCCCCCTCTCCCCTTGTATCAGTTGCCA AGGAGCCCATATATGTCTTATCGCTTTATTTGTTCCTTCTTGCAGTTTCTGTTAAAATTGCTACTTCCATGTATGTTATA TGTCCTAAATTGCAGTGACTGTTCTCCTTTCTTAGGTTATTAGCAGGGTGGGTGATCTAGTTGGGATAAAATACTTTCCT GCTGAACCATCGAAGCAGCAACAAGAGGGTAAAACAGTGAAGTATGATTGAGAGAGAGACTTGTCTATAAGAAGAAAGAG GATCAAAGAGTAATGAAGACAAGGCTATAGTAGTAATAAGGCATTTTGTTTCCATGATGGATTGGTTTCGGACGAACTGG CATGTATAAATTTGTTGCCGTCTTCATAAGTCAGGACTTCGCTTGGAGCAACAACTGCATATAATCTTTGTTTTGAGATA CAGATACTGTCTCAAGGAGGGAAGTCTATTACTTATTTCGCGCAGTCATTAGATAATGTGTATAGTTGCAGGTTGGTTTA TCCATTTGAAATTGAGCATTGCTTGAAATTTTAATCAAATTGTAAAACTGAGGTTGAGTATTTTCTGTTGGGTTTTACTC TTTAAATTTACCAGGTCCCTTAGGGAGGTGTATTGGTGGAATAGCTACCCTGTACTACAAGATACTGTCTTCTTTAAGCT CAGGACATGGTAGGTTTGAGGAAAAATGAGTCTAAAACCAATTAAGGAACTTTGATTTGGATTGATTCAGATGTAGTAAA TTATTTTGGTAATTGATCACTAATTAAGTAATTATAGTTGATTTGGATTTGAGCAGAATGAGTTTGAACAAATTATAAAT TGAGTTTTGGGTTTCAGAAATATGTTTGCAATGTGAGTTGTATCAAACTTGTCAAGTTGTGTTGGAATGTTTATACTTCT AAAAAAATTATATCCTAAAAAAAAATGGATTGAAGATATATGTTGAGTTGGTTCTTGTTAGAAACTATTCTTGTGGGCTG TGGCCCTTGTCCAATAGCTTAAGTTTTTTAAGATTTATTGGTTTTTTTGGCTGTTTCTATGATTACATTTAACTCGACTT TAATTTAGTCCTACCGTTAACTTGGTCATCTAATTGAACCGGTTTTTCCACAAGCTACTGTGGAGGCGATGGGAGAGCTT AATCACCTAGGGTTTATCCACAGGCGATGAGAGAGCTACTCTTCCCCCTTTGTTACCCTTTGCTCGGTAGTGGGAAATTT TACATAAAATCAAGGGTGAATCATTAACTTAGTCCCTGTGTTTGTACGAGAATTCAAGTTTAGTCTCTCCCTATAAAAAT GTTTGGTCAATATCCTCACGATCGCAACCAGTTTGATTTTGGTCATAGCCGGAGGACGGAGTTCCGACAAGAGTACTAAA TGGCATGTCAGAGCTGATGTGGTTTTATCCATGTCTTCTTAATTAAAAATTAAATTAAAAATTAAATGTAGATAATAATT AATGTTTAAAATAATAAAAAAAATTAAAAAGTAACTCTTAAC
CDS sequence (LotjaGi4g1v0017900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATAGCTATTCCATATTTGACTGCATTAACCACCTACTTCAGCTACGGTTTGCTCTTCGCCTTCGGTCAATTCAGGGA TTTCTTCCGCAAAATCTTCGACTGGTGCAGCTCCAACAATCTTCAGGGTTACGCTCCGATCTGCTTAGGTCTCGAAGATT TTTACATTCGCCGATTGTACCTTCGGATTCAGGACTGTTTTGGAAGACCGATAGCTAGTGCTCCTGATGCTTGGTTTGAT GTAGTTGAACGCTACTCCAATGATAATAACAAGACACTAAAACGAACTGATAAATTAAGTAGATGCCTTAACTTGGGATC ATACAACTATCTTGGTTTTGCTGCGTCTGATGAATATTGCACGCCTCGAGTAATTGATTCGTTGAAGAAGTATTCTCCAA GCACTTGCAGTGCCCGGGTGGATGGGGGCACAACTGATCTTCACAATGAATTGGAGGAGTGCGTTGCTAGTTTTGTTAGA AAGCCAGCTGCGTTGGTTTTTGGAATGGGCTATGTGACAAATTCTGCAATTCTTCCTGTCCTGATGGGGAAGGGAAGTTT GATTATTAGTGATTCATTGAACCACAACTCAATTGTTAACGGCGCACGAGGATCTGGAGCAACTATTCGTGTTTTCCAAC ACAATATGCCATCACATCTAGAAGAAGTATTACGAGAACAAATTGCTGAGGGACAGCCAAGGACGCATAGGCCATGGAAG AAGATAATGGTTATTGTGGAGGGGATATATAGCATGGAAGGAGAGCTTTGTAAACTTCCAGAGATCATAGCTATATGCAA AAAATACAAGGCCTATACATATTTGGACGAAGCACACAGCATTGGAGCCGTGGGCAAGACAGGAAGAGGTGTTTGTGAGC TCTTGGGTGTTGATACTGCTGATATTGACATTATGATGGGAACATTCACGAAATCATTTGGATCATGTGGAGGTTATATT GCAGGATCTCAGGAGCTTATCCAATACTTGAAGTACACTTGCCCTGCTCATCTTTATGCAACTTCTGTTTCACCCCCTGC TGCACAACAGATAATATCATCCATAAAAGTAATCCTTGGAGAGGATGGTTCCAATAGAGGTGCCCAGAAACTCGCAAAAA TTCGAGAAAATAGCAATTTTTTCAGGTCAGAACTGCAGAAGATGGGATTTGAGGTTCTTGGAGATAACGATTCTCCTGTA ATGCCAATCATGCTTTACAACCCAGCTAAAATTCCTGCCTTCTCAAGGGAGTGCCTCAGGCAGAATGTTGCTGTTGTAAC AGTGGCATTTCCTGCAACTCCATTGCTACTGGCTAGGGCACGCATATGTATATCAGCTTCTCATTCAAGGGAAGACCTTG TGACTGCGTTGCAGGTTATTAGCAGGGTGGGTGATCTAGTTGGGATAAAATACTTTCCTGCTGAACCATCGAAGCAGCAA CAAGAGGGTAAAACAGTGAAGTATGATTGA
Protein sequence (LotjaGi4g1v0017900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIAIPYLTALTTYFSYGLLFAFGQFRDFFRKIFDWCSSNNLQGYAPICLGLEDFYIRRLYLRIQDCFGRPIASAPDAWFD VVERYSNDNNKTLKRTDKLSRCLNLGSYNYLGFAASDEYCTPRVIDSLKKYSPSTCSARVDGGTTDLHNELEECVASFVR KPAALVFGMGYVTNSAILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNMPSHLEEVLREQIAEGQPRTHRPWK KIMVIVEGIYSMEGELCKLPEIIAICKKYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTADIDIMMGTFTKSFGSCGGYI AGSQELIQYLKYTCPAHLYATSVSPPAAQQIISSIKVILGEDGSNRGAQKLAKIRENSNFFRSELQKMGFEVLGDNDSPV MPIMLYNPAKIPAFSRECLRQNVAVVTVAFPATPLLLARARICISASHSREDLVTALQVISRVGDLVGIKYFPAEPSKQQ QEGKTVKYD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | - | – | |
| PANTHER | 2 | 487 | 486 | 0.0 | – | |
| PANTHER | 2 | 487 | 486 | 0.0 | – | |
| TMHMM | 2 | 24 | 23 | - | – | |
| Phobius | 6 | 25 | 20 | - | – | |
| Phobius | 26 | 489 | 464 | - | – | |
| SUPERFAMILY | 98 | 465 | 368 | 1.06E-93 | ||
| CDD | 100 | 464 | 365 | 4.29334E-166 | – | |
| Gene3D | 100 | 459 | 360 | 8.4E-122 | ||
| Pfam | 102 | 460 | 359 | 1.2E-54 | ||
| Gene3D | 117 | 367 | 251 | 8.4E-122 | ||
| ProSitePatterns | 308 | 317 | 10 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Biosynthetic process | The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones. | ||
| Molecular function | Transferase activity | Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2. | ||
| Molecular function | Pyridoxal phosphate binding | Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6. |
Expression pattern of LotjaGi4g1v0017900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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