Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0026700 |
| Transcript ID | LotjaGi4g1v0026700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NBS-LRR disease resistance protein; TAIR: AT3G14470.1 NB-ARC domain-containing disease resistance protein; Swiss-Prot: sp|Q7XA42|RGA1_SOLBU Putative disease resistance protein RGA1; TrEMBL-Plants: tr|A0A072UQM3|A0A072UQM3_MEDTR NBS-LRR type disease resistance protein; Found in the gene: LotjaGi4g1v0026700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:3250660..3254625) extracted from Lotus japonicus Gifu genome v1.2.
GCTCAAAGTGTGGACCAATTTGCAACTAGTGCACGTTAGGTGTCCCTACATTTTAAGGAAGTATTGTGATAAATGATAAT CATTCTCTCTGCTGCTTTAATTTAACAGTTTTGATGTATCTATCCATACTCTCATCCTCTTTGCTTGCATCAAACCAAAT ACACACACATGGAAGCAATAGTTTCTGGGTTGTTGATCTCCATCTTGGACAGGCTAGCAACCAGAGCTTTTCAGAACATT TCCATGGCAAGAGGGCTCCATGCTGATGTGGCCACCCTCCAAGACTCTCTCACAATCATCAGTACTTTCCTTGTGGATGC TGAGAACAAGCAAACTCAGAACCAGGCCATATTGCTCTGGCTGAACCAACTCAAAGATGTTTTCTATGATGCCAGGGACA TCCTTGATGAGATTGAATGTGAGACTTTGAGGAGCCAAGTTGTGAACAACACACATGGTGGAGGAGGCTTCACCAGAAAG GTACAACGTTTCTTCTCATCCTCTAACCCTTTTGCATCTCGTGTTAAGATGGCCCGCAAGATCAAGGGCATCAAGCAGAG GATTGATGAGATAGCATCTCTTAGGATGAAGCTAGGTCTCTCTGAGAGCCATTCATGTAGTAGTAGTAGTACTAGTGTAC CACTCAATCATAAAATGGCTTGGAGAGAGACTCATTCTCATGTTAGGCCTTCCCATGTGATTGGTAGAGATGAGGAGAAA GAAAAAATCATTGTGTCCTTGATGGCTCCACCATGTGATGGTGAGGAGATTGATGTTGTTCCAATTGTTGGAATTGGAGG GCTGGGGAAGACCACACTTGCTCAATTAGTTTACAATGATGATAGGGTGATTGAGAATTTTGATTTGCGTATGTGGGTGT TTGTGTCTGATGATTTTGATGTTAAGAGGCTAGTGCTAGAGATTCTGAAAGCTATGCATGGAGTAGATGTAGATGCTCAC AACTATAGTTTTGATCAATTACAGAACCTACTACGCGAGGGATTAGAAGGGAAGAAATTTCTACTTGTTCTAGATGATGT CTGGAATGAGGATTATAGATTGTGGCTTGAATTGAGAAATATTTTACTAGGTATCCATGATGAAGGTAATAAACCCGGTA ACAAGATTATCACCACCACTCGGAGTGACAAGGTTGCTTCGATAATGGGGAATGTTTATAAACACAACTTGAGATATCTC CCTGAAGAAGATTGTTCAAAGCTGTTTGTTAAGTGTGCATTCCCAGCAGGAGATGCGAATCAGCATCCAAGGCTTTTAGA AATCGGGAAGGAGATTGCTAGAAAGTGCAAAGGGTTACCCTTGGCAGTGGTGAGTTTAGGATGCCTGCTTTACTCAAAAT CGGATGAAAGGGAGTGGAAGAAAATAAGAGATAGTGAAATTTGGAAAATGAACCAGCAAGATGATGGCATTTTGGCTGCA TTGAAACTGAGCTATAATCACTTGCCATCTGAAATGAAACAGTGTTTCTCTTATTGTTCAATTTTTCCTAAGGGTTATGA GTATACTAATTTGGAAATGATTTCATTGTGGATGGCTCATGGACTGCTACAAACCAAAAATGAAGATGAAGAGCCAGAAG ATCTTGGGGAATTTTATATTAAGGAGTTAGTTTCAAGATCTTTCTTTGAAGGTGCACCTGAAGAACAAGTGGTTATTGAT GGTCTTATTTCTGAAGAACTTGAGCTTCTAGGCATCTCCATCTTCAAAATGCATGATCTTATTCATGACCTTGCTGTGTC CACAATGCAAAATGAAAGGACAGTAGTGAAATTCAATTCAACAAATGTTAAAGAAAAGGTGCATCATTTATCATTTGCAG ACAGTGGTGCAGGAGTTCCTACTTTTGGTCCAAAGTTGAAAAAGGTCCGAACCATTGGATTCTGGCATGCAGGTAAAAGT GCACCTGCAATCACTAAACCATTTGTGGAATGGATCTCCAAGAAATTCAAGTACCTCAGGGTGTTGAACATACAAGGATC AAATTTTCAATTCTTGCCAGATTGTTTCGACAAAATGAAGCATTTGAGGTATCTTGATCTAAGCTATTGCCAGAGGATGG AAAAACTCCCAGATTCAATTTGCAAGCTTCAAAGTCTGGAGGTTTTAAATCTATGTAGATGTGTAGCACTTAAATATATT CCCAAAAAATTGAAGAATCTTATCAGCCTTCGTATTTTGTGGATTACGACACAAGTTTGCAATTTGTCTTTCATAAGCAT TGGGAGATTGAAATGTCTGCAAATTTTGATCTTATGGAATTGTGAAAATTTGGTCTTCCTTCCGCGTGATTTGAGGCACT TGACTGCTTTAAAGAGGCTGAGCATTGAGGCTTGTGAAGAGGTGACTAGTTTTGAGGATGGAGAAGAAGAAAATGAAAAC TACTCCTTGAAACTTGAACGATTTTCAATTGATAAATTACCCAAATTGGCAGCACTACCTGGTTGGCTTAGAAGATCCGG TAAAACTTTGCAATACATGGGTCTTTCTGTATGTCGTAGCTTAATGGCATTGCCAGAATGGTTGCCAAATCTAACATCAC TTGAGACTCTTCTCATTGCTGATTGTCCAAACTTGGAACTACCTCAACAAATGGATCGTCTTCAAAACCTTCAAAACTTA AAGATATATGGATGTCCTCAGCTAGTTGAGAGATGCAAAAGAAACACAGGCCCTGACTGGTCCAAAATAGCTCACATCCC AAATGTTGAAGTAAGTGTAGATCCTGATTTCTCTTTGGTTTGCATCCATACGGATTGTATGTGTTACTTATTATGCTTGT CTAGCTGAATGTTGCTTTTTATGTTTCTTCAATGAATCCACTCATTGTTTAGGTGCAATCTAGTTTGAATGTTAGACTTT GCTGTTGACAGCTTTGAATTGCATAATGAATTTAGATTGCATGTTAATTCAGATAGTCTATAATTTTTATTTTTTTTCAC TTCTATTGTTGTTTGGACAAACTGATCTAGTTTTTGAGAAAAGTGGGAAGAAACTGAGCAACTAAACTATTGGAATATGG ACTGTTACTGAAATGTCAAGTGTGCAACTAAATCTACTATCAGATCAACCTATCATGCTCTGGTAGTTTAATTGGCATTT TAATGGAGTGTGAGTAACATTAAATAAGCTCTGGGGATAGCAATTTTGGCTTTTGAATATTATTATAACAAAATTGAGAT TTATTATTATACATGTACATTTGTAGCTTTTGTCAGATAATTTTTTCACCTAGCTAGTTTTGCACCTGCATGATGGACTA ATTGTTTGTATTTGTCAGTTATTAATACTTTGGTTTCAATATGCAAGGTTCACAGTGTCTAGGATCACTGGTAACATCAT GGAGCAGATAGAGATTTTTTGCTCGTCCGATTGAGCGTAACCACGGGATTGTAAATGGTTGAGATAAGAGTTTTAAATTG CTGTTGAAGTCGCGGTTGTCACTACATTGCAGAACAATCATTTAAATTGCGGTTGTGGTCACGTCCACAATGCTTGATCT TGTTGATGGCATTGGTCTGTTTGACCTTTTTACCAACCTTAGATTAAGAAGGTGAATGGCTGCACTAATGCATTGAACAA GAACAGCTAATAATGCTTTAGCAATTTTTCCATCTTGATTCATGGACACATATAACACATCAAATGAAAAATGAAAATCT TCAATCCAAAGCTTTAATGGCAACTCAGTCATCTTTTGATCATTGGAAAGATTTGTATTGTCATGCTTCCATTCCACGTC TAATCAAACTTGATATTAGAACGGAGAACTATAGGTGGCTGGTACATAATCAGAGGAAATGTAGGCTAATAAGTAATAAC AATATTACCAAATAATTTATGTTCTTTTTTTTTTGAAACTAATTTATGTTCATTGTACAAATGTCAACATTATTTATCCA TCATCATATACATGGCATGAATCCTGAATGACGTATGCAAGTTATG
CDS sequence (LotjaGi4g1v0026700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGCAATAGTTTCTGGGTTGTTGATCTCCATCTTGGACAGGCTAGCAACCAGAGCTTTTCAGAACATTTCCATGGC AAGAGGGCTCCATGCTGATGTGGCCACCCTCCAAGACTCTCTCACAATCATCAGTACTTTCCTTGTGGATGCTGAGAACA AGCAAACTCAGAACCAGGCCATATTGCTCTGGCTGAACCAACTCAAAGATGTTTTCTATGATGCCAGGGACATCCTTGAT GAGATTGAATGTGAGACTTTGAGGAGCCAAGTTGTGAACAACACACATGGTGGAGGAGGCTTCACCAGAAAGGTACAACG TTTCTTCTCATCCTCTAACCCTTTTGCATCTCGTGTTAAGATGGCCCGCAAGATCAAGGGCATCAAGCAGAGGATTGATG AGATAGCATCTCTTAGGATGAAGCTAGGTCTCTCTGAGAGCCATTCATGTAGTAGTAGTAGTACTAGTGTACCACTCAAT CATAAAATGGCTTGGAGAGAGACTCATTCTCATGTTAGGCCTTCCCATGTGATTGGTAGAGATGAGGAGAAAGAAAAAAT CATTGTGTCCTTGATGGCTCCACCATGTGATGGTGAGGAGATTGATGTTGTTCCAATTGTTGGAATTGGAGGGCTGGGGA AGACCACACTTGCTCAATTAGTTTACAATGATGATAGGGTGATTGAGAATTTTGATTTGCGTATGTGGGTGTTTGTGTCT GATGATTTTGATGTTAAGAGGCTAGTGCTAGAGATTCTGAAAGCTATGCATGGAGTAGATGTAGATGCTCACAACTATAG TTTTGATCAATTACAGAACCTACTACGCGAGGGATTAGAAGGGAAGAAATTTCTACTTGTTCTAGATGATGTCTGGAATG AGGATTATAGATTGTGGCTTGAATTGAGAAATATTTTACTAGGTATCCATGATGAAGGTAATAAACCCGGTAACAAGATT ATCACCACCACTCGGAGTGACAAGGTTGCTTCGATAATGGGGAATGTTTATAAACACAACTTGAGATATCTCCCTGAAGA AGATTGTTCAAAGCTGTTTGTTAAGTGTGCATTCCCAGCAGGAGATGCGAATCAGCATCCAAGGCTTTTAGAAATCGGGA AGGAGATTGCTAGAAAGTGCAAAGGGTTACCCTTGGCAGTGGTGAGTTTAGGATGCCTGCTTTACTCAAAATCGGATGAA AGGGAGTGGAAGAAAATAAGAGATAGTGAAATTTGGAAAATGAACCAGCAAGATGATGGCATTTTGGCTGCATTGAAACT GAGCTATAATCACTTGCCATCTGAAATGAAACAGTGTTTCTCTTATTGTTCAATTTTTCCTAAGGGTTATGAGTATACTA ATTTGGAAATGATTTCATTGTGGATGGCTCATGGACTGCTACAAACCAAAAATGAAGATGAAGAGCCAGAAGATCTTGGG GAATTTTATATTAAGGAGTTAGTTTCAAGATCTTTCTTTGAAGGTGCACCTGAAGAACAAGTGGTTATTGATGGTCTTAT TTCTGAAGAACTTGAGCTTCTAGGCATCTCCATCTTCAAAATGCATGATCTTATTCATGACCTTGCTGTGTCCACAATGC AAAATGAAAGGACAGTAGTGAAATTCAATTCAACAAATGTTAAAGAAAAGGTGCATCATTTATCATTTGCAGACAGTGGT GCAGGAGTTCCTACTTTTGGTCCAAAGTTGAAAAAGGTCCGAACCATTGGATTCTGGCATGCAGGTAAAAGTGCACCTGC AATCACTAAACCATTTGTGGAATGGATCTCCAAGAAATTCAAGTACCTCAGGGTGTTGAACATACAAGGATCAAATTTTC AATTCTTGCCAGATTGTTTCGACAAAATGAAGCATTTGAGGTATCTTGATCTAAGCTATTGCCAGAGGATGGAAAAACTC CCAGATTCAATTTGCAAGCTTCAAAGTCTGGAGGTTTTAAATCTATGTAGATGTGTAGCACTTAAATATATTCCCAAAAA ATTGAAGAATCTTATCAGCCTTCGTATTTTGTGGATTACGACACAAGTTTGCAATTTGTCTTTCATAAGCATTGGGAGAT TGAAATGTCTGCAAATTTTGATCTTATGGAATTGTGAAAATTTGGTCTTCCTTCCGCGTGATTTGAGGCACTTGACTGCT TTAAAGAGGCTGAGCATTGAGGCTTGTGAAGAGGTGACTAGTTTTGAGGATGGAGAAGAAGAAAATGAAAACTACTCCTT GAAACTTGAACGATTTTCAATTGATAAATTACCCAAATTGGCAGCACTACCTGGTTGGCTTAGAAGATCCGGTAAAACTT TGCAATACATGGGTCTTTCTGTATGTCGTAGCTTAATGGCATTGCCAGAATGGTTGCCAAATCTAACATCACTTGAGACT CTTCTCATTGCTGATTGTCCAAACTTGGAACTACCTCAACAAATGGATCGTCTTCAAAACCTTCAAAACTTAAAGATATA TGGATGTCCTCAGCTAGTTGAGAGATGCAAAAGAAACACAGGCCCTGACTGGTCCAAAATAGCTCACATCCCAAATGTTG AAGTTCACAGTGTCTAG
Protein sequence (LotjaGi4g1v0026700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEAIVSGLLISILDRLATRAFQNISMARGLHADVATLQDSLTIISTFLVDAENKQTQNQAILLWLNQLKDVFYDARDILD EIECETLRSQVVNNTHGGGGFTRKVQRFFSSSNPFASRVKMARKIKGIKQRIDEIASLRMKLGLSESHSCSSSSTSVPLN HKMAWRETHSHVRPSHVIGRDEEKEKIIVSLMAPPCDGEEIDVVPIVGIGGLGKTTLAQLVYNDDRVIENFDLRMWVFVS DDFDVKRLVLEILKAMHGVDVDAHNYSFDQLQNLLREGLEGKKFLLVLDDVWNEDYRLWLELRNILLGIHDEGNKPGNKI ITTTRSDKVASIMGNVYKHNLRYLPEEDCSKLFVKCAFPAGDANQHPRLLEIGKEIARKCKGLPLAVVSLGCLLYSKSDE REWKKIRDSEIWKMNQQDDGILAALKLSYNHLPSEMKQCFSYCSIFPKGYEYTNLEMISLWMAHGLLQTKNEDEEPEDLG EFYIKELVSRSFFEGAPEEQVVIDGLISEELELLGISIFKMHDLIHDLAVSTMQNERTVVKFNSTNVKEKVHHLSFADSG AGVPTFGPKLKKVRTIGFWHAGKSAPAITKPFVEWISKKFKYLRVLNIQGSNFQFLPDCFDKMKHLRYLDLSYCQRMEKL PDSICKLQSLEVLNLCRCVALKYIPKKLKNLISLRILWITTQVCNLSFISIGRLKCLQILILWNCENLVFLPRDLRHLTA LKRLSIEACEEVTSFEDGEEENENYSLKLERFSIDKLPKLAALPGWLRRSGKTLQYMGLSVCRSLMALPEWLPNLTSLET LLIADCPNLELPQQMDRLQNLQNLKIYGCPQLVERCKRNTGPDWSKIAHIPNVEVHSV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 17 | 17 | - | – | |
| Phobius | 1 | 2 | 2 | - | – | |
| CDD | 2 | 137 | 136 | 3.94835E-13 | ||
| Phobius | 3 | 13 | 11 | - | – | |
| Pfam | 11 | 100 | 90 | 1.2E-21 | ||
| Phobius | 14 | 17 | 4 | - | – | |
| Phobius | 18 | 858 | 841 | - | – | |
| PANTHER | 37 | 760 | 724 | 7.4E-144 | – | |
| PANTHER | 37 | 760 | 724 | 7.4E-144 | – | |
| Gene3D | 160 | 338 | 179 | 1.1E-37 | – | |
| SUPERFAMILY | 165 | 443 | 279 | 1.17E-67 | ||
| Pfam | 181 | 430 | 250 | 1.9E-49 | ||
| PRINTS | 203 | 218 | 16 | 1.1E-19 | – | |
| PRINTS | 278 | 292 | 15 | 1.1E-19 | – | |
| PRINTS | 380 | 394 | 15 | 1.1E-19 | – | |
| SUPERFAMILY | 520 | 844 | 325 | 4.08E-36 | – | |
| Gene3D | 584 | 771 | 188 | 8.5E-32 | ||
| PRINTS | 621 | 637 | 17 | 1.1E-19 | – | |
| Gene3D | 772 | 841 | 70 | 6.9E-11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi4g1v0026700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…