Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0050000 |
| Transcript ID | LotjaGi4g1v0050000.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NBS-LRR type disease resistance protein; TAIR: AT1G12220.1 Disease resistance protein (CC-NBS-LRR class) family; Swiss-Prot: sp|O64973|RPS5_ARATH Disease resistance protein RPS5; TrEMBL-Plants: tr|G7JRW4|G7JRW4_MEDTR LRR and NB-ARC domain disease resistance protein, putative; Found in the gene: LotjaGi4g1v0050000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:6076714..6081808) extracted from Lotus japonicus Gifu genome v1.2.
AAAAATGTTGATGTTCCCATTGAAAATACATACAGCCTAGTTGAGCCTGCTTATAATTGGGAGACGGGTAATGATATGCG GAAGGACAGGGACTCTTGAAGAGAAGTCGTTGTAATCTGTAAGAAAGGGCTACGCATTGGAGAGACATTTTTGAGGTAAA CAAGCCATAAAAACAGTTGAAGACTACTGAGTTTCTTTCTCCTCCATTTCAAAGTTTCAGAAGTGCATCCACCTCCCACA CAACAGTTGGAGACTCACTGATTCTCCATCTCTGAAAACTCACAGGTTAGAGAGTTATTTGTTAAAAAAAATTATGTATT TTTAGAACACTTTTTTATACTACTGAACATTACTGATGATATTTAGCTTATGCATTAATTAAAGACCGAGGCCCCATAAT ATTTTGGTCAACCTCCGCCAATGTTTGTATAGTTCATCATTCTTTTTCAAAATTCTCATAATTATTGGAATTTGGGTTAG GAGTAACTTTACCCAAAAGCTAGTTTAGTGGTGAAGATTGTTCTACCATATATAAGGATCACTTTGGTCATATGTTAGTT AATGTGAGATCTTAACATCCCGCTCACGAGTCACGACTTAGGCTGGACATTTAGAGCGTGAAAATTGTTTGAATGAACAT CTGCCGGTTACTCATATACACGTGTAGTATAATAGTATCCAATAAATGAATACAGGATAACTTCTATAGATTGTAAGCAA TAATAAGAATCATATTATATAAGCAATAGACTTTTAAAATAAATTCTGGTGATAGTTGACTTCGTTAAAAATGACAGCAT TTGCGTGGAAGGTACTTCAAGATAGAGTTCCAGAGGGTCAATTTACACAGAATGGAAATCTTACCACTTCAGTGATGCAT GATTGGGAGTACAAGCAAGAAATTGAAATCGCAAAGCACTTGTTTCTTTACTGTAAGTTTTCTTAGTACCTTTGGCAAAT AATCTGTACATGGTTTGGTAAAGGAAATTGCATTACCAGGTAGACATCATTTAGTTTTGACTCAATGCATCAAGTCACAT GTACCTTGGAATAATATGTGTTACGTACTTTAATTTGATCAGTATAATTGCTGCAAAGAAACCAGATTACTTTAAATTCT TCAACTCAAAGTGGATGATCAAAGAAGAACTGTAGTTTATTAAGGTTAAGGATCGGTTGTGCAGTGTGGATAAAAGTAAA AATAGAAGAGGCTAGAGTATGCCTCATATGAGTGGTGGACTGGTGGGTGAATCCTTAGTACCATTTGAAGTTTGTTTCTT TATGTGTTAGATGTTTGCTTATCTATACATGCTGCTTGGTGCTTATATATCTTCTATGAGCAACATTTGATATTCCTGCC TAGAGTTTCTTTTTAACTTTGTTTTTCCATTAAAATAAAAAAGAAAAGTAAAATGCAAGTATTACCTTTTTTTAGATACA GATCAAAGCCATGGAGGTGGCAGCAGGATTACTGTTGGATGCTGTTATTCGTTTGTTAAGTTGTGGTAAGGTCCATGCTG CCTATGTTTATAAGCTGGAAGAGAATCTAGCATTGTTGCAAAAAAAGTGGATTGATCTTCAGAACTTAAACACCGATGTG CATAGAAGAATTGATGATGCTGAGGGCATGGGGGAGATGCAAAGGGCAGATGAAGTGAATGGTTGGCTGCAAGATGTTCA AGATCTTCAAAAGGTATCCAATTATAAATGCTATAGTTTATATGAGAAATGCTACTAAAATATTCTTCAACGCACTCTAC GTGATTGATTTAAATTTTTTGAAGAGCAACACATTTTTGAAAAAGGGAGGTAAATGTCTTAACTTTAAAGCTTTGCAAGG GAAACAAAAGACTAACTAGACTGTTTATGTTGACACATGTTTACCAAGACTTGCTATATATATGTACTAGGTAATGGAGG ATATTCAAGATGAAGATTCTCAAGAAACTCAAAATAAATGTTCAAGTGGTTGCTGCCAAAAGAACTGTATGTTAAGCTAC AAGTTAGGAAAGAAAATCGTGAAGATGCTCAATGAGGTTGATCGATTAGTGAACTCGGGTAAACGTTTTGTTGACATGAA TGTTTATATTGCTTACAAGCTTCCACCCAAGCTAATGAATGAGATGCCTTCAGTTGAGACCGTAGGCTTGGACTTGATGC TCAACCAGGCGTGGAATAGTCTTGAAGATGACAATGTGGGAATCATTGGTTTATATGGAATGGGTGGCGCTGGGAAAACG ACCCTTATGATGAGAGTTCACAATGAATTTGGAAAGAGGGAGCACAAGTTTTCTCTTGTACTATGGGTGGTGGTTTCTAG AGATTGTGATATCAATAAGATTATGAATGATATTCGTAACAGGTTAGGCATCATTGATGATGTTTGGAACAAAAGCAGCC AACATGAAAGAGTGACAAGGATTTATGAAGTCTTGAAACAGAGGAAATTTGTGTTGATGTTAGATGATGTATGGGGAAAG TTGGAACTAGAAATGGTGGGGGTTCCACTTCCAAAGGATACTAACAATCAATCAAAAGTTCTGTTCACAACACGTCTTGA GGATGTTTGTGCGAAAATGCAAGCTCAGAAGAAATTCAAAGTGGAATGTTTACTAGAGCAAGAAGCATTTGATTTGTTTT GTAAAAAAGTTGGTGATGAGACTTTAAAGAGTCACCTAGAAATTCCAAGGCTCGCATGGGAGATGACTAAAGAATGCAAA GGATTGCCACTAGCAATTATTACAGTGGGAAGTGCCATGGCTGGAGTGAAAAGTGTTGAAGCATGGAGACAAGCCAAAAA TGATTTAAGAAGTTCTCCTTGGATTGCTTCATATTTGGAGAACGAAGTCTTTCGTATCCTTAAGTTTAGTTATGATAGAT TGCCAGATGACGCACACAAAAACTGTTTCCTGTACTGCGCACTATACCCAGAAGATTATGAAGTAGGAGTTGATGTTCTC ATTGATAGATGGATTGGAGAGGGATTTCTGAGTGGAAATAAGACCAAGAAGAGTATTTATGATATGTATGAGCAAGGAGA ATCTATCATTGAAAAGTTAAAACTTTCATGTCTCCTAGAGGGTGTTGAATATGATTATTTTTGGACTTCGGCGATTAAGA TGCATGATGTGACTAGAGACATGGCACTTTGGATAGCCCGTGATCAAGATGAAAACAAAGGAAAAGTTGTTGTTCAGGGA GAAGCATTAGCCATGTCTGAAATGGATGTTGATAGGTTGAATATTGTGGAAAGGATTTCAATTATTGATGCTAGTGGAAG TTGGAACTGGCAAGTACCAACTTGTCCAAATCTGATCACCCTATGTATTCTAGATTATGTGAACACTACATTTTATTCAA ATCTCCAATCCATGACAAGGTTGAAAGTCTTGGATCTATCTGGTAAATCTTTTGAACATCTCCCTGTAGAAATTGGCAAC TTAATCAACTTGGAATTCCTTAACCTGACAAGAACAGATATAAGAAATCGGTTGCCAATTGAATTGAAGAATTTGAAGAA CGTGAGGGTATTTCTTATGGAAGGTTGCCCACATAATCTCGAAATCATTCCTTTGGAAGTGATAGAAAGCCTTGAGCAGT TAAAGGTGTTTAGATTTACTAGTGAGGATAAGGCTGGTGAACTTTTTGAGGAAGCATTCTTACAGAAGCTGGAGTCCTTA CCAAAATTGGAAGAAGTATCCATGGAAATAAACACCTTCACGGGCATGCATAAATTGATTGACTCGACCAAATTGCAAGG TTGCTGGAGACATTTTTCAATTCAGGGAATCGATGATCCACTTGAAATGTCACCATTGTTAGCATCTATGTCAAGAATGA AGCATCTGTACCGTATAAGTTTATACTCTATTAACATTATTGAAGGCTCGTCCATCACTAACACTTGCTACCTTCACAAG CTTCGCCGGGTGTATGTCGAGAGTTGTGACTCAATAACTCATTTGACATGGTTGATATATGCTCCACTTCTTGAGTTTCT TGAGGTTCGTAACTGTGATTCCATTGAAGAACTAGTGAAGGAAGCTCAAAATGATATATTCCAAAATCTTAGACTTGTCC GCCTTTATGGTTTGGCAAAGTTGAGGAGCATCCACAAGAGCGCATTGGATTTTCCTTTTCTGGCATATCTTCATGTATAT GAATGCCCCGATTTGAAGAAGCTCCCTTTGAATTCTAATTCTGCAAAGGACTTGATTGCAATCAAAGGACAGAAAGAGTG GTGGAACAGTTTAGAGTGGCAAGACACAGACATTAAAGAGCTACTCCATTCCAAATTTAGAGCACGGTAAATTGGAGGAA AAGTATGCTACTCAGAAATTTATTTCTTCTTCATTAAAGAGTGTATCATGGGAAGCGTCAATGGTTTTGCAAGCACTGCA TTTGAGAGTTGAAAATTTCTTGAGCACTTGTGATTAATGGTTTTGTAAATTCTTCATGCTTTTGTGCTACTTTGGATAGA AACTGTTTCCTCATTCATTTCCACATTTAGGGGTCGTACTTGTATCAGCTGGCTTATTTTATTTATTATTGGCAACTGAT GTTTACTGTATTTCACGTTTGCAACTTTAAATTACTTCTTTGTTCAAATTATTCAGATTGACAGATTCTTAAATATACCA TCCTCTCCTACTGTTATGATTATGGATATTTTACTTTCTCTTTTTGCTCAGGACTTATAGTAGTTAGTAAACCTATGATT TTGTTTAACATCTTGATGAATGATTCCTAATAATTTTAGAAGTGGATTGTTTTATGAAGTAGAGATTGATTGCATTTTTC ATTTTCATAAATTTCTTGTGTGGGAGATTGAGCTCAATGTTTGCTTGTAAGTACAACATGATGGAGCAAAATTCAAGGTC TTAGTCTTCTCCTAATCCTTGGCCTTCTTCACATTCAACTTGTGACTCTTGACAGCTTTTTCGGTAAAGTGGAAATTTTT CTTCACATAAACTAGGTTCTCCCTCTTTTTCATGTACTGGACATTTGCTTAGTCAAGTGAACTTGAATTACTTAGTTACC CAACAATCCAACTAAGTATGGTAAAACCATTGTAGTAGAACATTTTAGTACCTAG
CDS sequence (LotjaGi4g1v0050000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTGGGAGTACAAGCAAGAAATTGAAATCGCAAAGCACTTGTTTCTTTACTATCAAAGCCATGGAGGTGGCAGCAGG ATTACTGTTGGATGCTGTTATTCGTTTGTTAAGTTGTGGTAAGGTCCATGCTGCCTATGTTTATAAGCTGGAAGAGAATC TAGCATTGTTGCAAAAAAAGTGGATTGATCTTCAGAACTTAAACACCGATGTGCATAGAAGAATTGATGATGCTGAGGGC ATGGGGGAGATGCAAAGGGCAGATGAAGTGAATGGTTGGCTGCAAGATGTTCAAGATCTTCAAAAGGTAATGGAGGATAT TCAAGATGAAGATTCTCAAGAAACTCAAAATAAATGTTCAAGTGGTTGCTGCCAAAAGAACTGTATGTTAAGCTACAAGT TAGGAAAGAAAATCGTGAAGATGCTCAATGAGGTTGATCGATTAGTGAACTCGGGTAAACGTTTTGTTGACATGAATGTT TATATTGCTTACAAGCTTCCACCCAAGCTAATGAATGAGATGCCTTCAGTTGAGACCGTAGGCTTGGACTTGATGCTCAA CCAGGCGTGGAATAGTCTTGAAGATGACAATGTGGGAATCATTGGTTTATATGGAATGGGTGGCGCTGGGAAAACGACCC TTATGATGAGAGTTCACAATGAATTTGGAAAGAGGGAGCACAAGTTTTCTCTTGTACTATGGGTGGTGGTTTCTAGAGAT TGTGATATCAATAAGATTATGAATGATATTCGTAACAGGTTAGGCATCATTGATGATGTTTGGAACAAAAGCAGCCAACA TGAAAGAGTGACAAGGATTTATGAAGTCTTGAAACAGAGGAAATTTGTGTTGATGTTAGATGATGTATGGGGAAAGTTGG AACTAGAAATGGTGGGGGTTCCACTTCCAAAGGATACTAACAATCAATCAAAAGTTCTGTTCACAACACGTCTTGAGGAT GTTTGTGCGAAAATGCAAGCTCAGAAGAAATTCAAAGTGGAATGTTTACTAGAGCAAGAAGCATTTGATTTGTTTTGTAA AAAAGTTGGTGATGAGACTTTAAAGAGTCACCTAGAAATTCCAAGGCTCGCATGGGAGATGACTAAAGAATGCAAAGGAT TGCCACTAGCAATTATTACAGTGGGAAGTGCCATGGCTGGAGTGAAAAGTGTTGAAGCATGGAGACAAGCCAAAAATGAT TTAAGAAGTTCTCCTTGGATTGCTTCATATTTGGAGAACGAAGTCTTTCGTATCCTTAAGTTTAGTTATGATAGATTGCC AGATGACGCACACAAAAACTGTTTCCTGTACTGCGCACTATACCCAGAAGATTATGAAGTAGGAGTTGATGTTCTCATTG ATAGATGGATTGGAGAGGGATTTCTGAGTGGAAATAAGACCAAGAAGAGTATTTATGATATGTATGAGCAAGGAGAATCT ATCATTGAAAAGTTAAAACTTTCATGTCTCCTAGAGGGTGTTGAATATGATTATTTTTGGACTTCGGCGATTAAGATGCA TGATGTGACTAGAGACATGGCACTTTGGATAGCCCGTGATCAAGATGAAAACAAAGGAAAAGTTGTTGTTCAGGGAGAAG CATTAGCCATGTCTGAAATGGATGTTGATAGGTTGAATATTGTGGAAAGGATTTCAATTATTGATGCTAGTGGAAGTTGG AACTGGCAAGTACCAACTTGTCCAAATCTGATCACCCTATGTATTCTAGATTATGTGAACACTACATTTTATTCAAATCT CCAATCCATGACAAGGTTGAAAGTCTTGGATCTATCTGGTAAATCTTTTGAACATCTCCCTGTAGAAATTGGCAACTTAA TCAACTTGGAATTCCTTAACCTGACAAGAACAGATATAAGAAATCGGTTGCCAATTGAATTGAAGAATTTGAAGAACGTG AGGGTATTTCTTATGGAAGGTTGCCCACATAATCTCGAAATCATTCCTTTGGAAGTGATAGAAAGCCTTGAGCAGTTAAA GGTGTTTAGATTTACTAGTGAGGATAAGGCTGGTGAACTTTTTGAGGAAGCATTCTTACAGAAGCTGGAGTCCTTACCAA AATTGGAAGAAGTATCCATGGAAATAAACACCTTCACGGGCATGCATAAATTGATTGACTCGACCAAATTGCAAGGTTGC TGGAGACATTTTTCAATTCAGGGAATCGATGATCCACTTGAAATGTCACCATTGTTAGCATCTATGTCAAGAATGAAGCA TCTGTACCGTATAAGTTTATACTCTATTAACATTATTGAAGGCTCGTCCATCACTAACACTTGCTACCTTCACAAGCTTC GCCGGGTGTATGTCGAGAGTTGTGACTCAATAACTCATTTGACATGGTTGATATATGCTCCACTTCTTGAGTTTCTTGAG GTTCGTAACTGTGATTCCATTGAAGAACTAGTGAAGGAAGCTCAAAATGATATATTCCAAAATCTTAGACTTGTCCGCCT TTATGGTTTGGCAAAGTTGAGGAGCATCCACAAGAGCGCATTGGATTTTCCTTTTCTGGCATATCTTCATGTATATGAAT GCCCCGATTTGAAGAAGCTCCCTTTGAATTCTAATTCTGCAAAGGACTTGATTGCAATCAAAGGACAGAAAGAGTGGTGG AACAGTTTAGAGTGGCAAGACACAGACATTAAAGAGCTACTCCATTCCAAATTTAGAGCACGGTAA
Protein sequence (LotjaGi4g1v0050000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIGSTSKKLKSQSTCFFTIKAMEVAAGLLLDAVIRLLSCGKVHAAYVYKLEENLALLQKKWIDLQNLNTDVHRRIDDAEG MGEMQRADEVNGWLQDVQDLQKVMEDIQDEDSQETQNKCSSGCCQKNCMLSYKLGKKIVKMLNEVDRLVNSGKRFVDMNV YIAYKLPPKLMNEMPSVETVGLDLMLNQAWNSLEDDNVGIIGLYGMGGAGKTTLMMRVHNEFGKREHKFSLVLWVVVSRD CDINKIMNDIRNRLGIIDDVWNKSSQHERVTRIYEVLKQRKFVLMLDDVWGKLELEMVGVPLPKDTNNQSKVLFTTRLED VCAKMQAQKKFKVECLLEQEAFDLFCKKVGDETLKSHLEIPRLAWEMTKECKGLPLAIITVGSAMAGVKSVEAWRQAKND LRSSPWIASYLENEVFRILKFSYDRLPDDAHKNCFLYCALYPEDYEVGVDVLIDRWIGEGFLSGNKTKKSIYDMYEQGES IIEKLKLSCLLEGVEYDYFWTSAIKMHDVTRDMALWIARDQDENKGKVVVQGEALAMSEMDVDRLNIVERISIIDASGSW NWQVPTCPNLITLCILDYVNTTFYSNLQSMTRLKVLDLSGKSFEHLPVEIGNLINLEFLNLTRTDIRNRLPIELKNLKNV RVFLMEGCPHNLEIIPLEVIESLEQLKVFRFTSEDKAGELFEEAFLQKLESLPKLEEVSMEINTFTGMHKLIDSTKLQGC WRHFSIQGIDDPLEMSPLLASMSRMKHLYRISLYSINIIEGSSITNTCYLHKLRRVYVESCDSITHLTWLIYAPLLEFLE VRNCDSIEELVKEAQNDIFQNLRLVRLYGLAKLRSIHKSALDFPFLAYLHVYECPDLKKLPLNSNSAKDLIAIKGQKEWW NSLEWQDTDIKELLHSKFRAR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Coils | 90 | 110 | 21 | - | – | |
| PANTHER | 111 | 727 | 617 | 1.3E-113 | – | |
| PANTHER | 111 | 727 | 617 | 1.3E-113 | – | |
| SUPERFAMILY | 168 | 438 | 271 | 6.89E-54 | ||
| Gene3D | 170 | 334 | 165 | 1.1E-27 | – | |
| CDD | 180 | 320 | 141 | 0.00276248 | – | |
| Pfam | 185 | 424 | 240 | 8.5E-66 | ||
| PRINTS | 200 | 215 | 16 | 2.1E-21 | – | |
| PRINTS | 276 | 290 | 15 | 2.1E-21 | – | |
| Gene3D | 338 | 407 | 70 | 3.4E-5 | – | |
| PRINTS | 371 | 385 | 15 | 2.1E-21 | – | |
| SUPERFAMILY | 505 | 872 | 368 | 2.04E-30 | – | |
| Gene3D | 533 | 677 | 145 | 8.0E-13 | ||
| PRINTS | 588 | 604 | 17 | 2.1E-21 | – | |
| Gene3D | 678 | 889 | 212 | 4.4E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi4g1v0050000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…