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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0050000 |
| Transcript ID | LotjaGi4g1v0050000.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NBS-LRR type disease resistance protein; TAIR: AT1G12220.1 Disease resistance protein (CC-NBS-LRR class) family; Swiss-Prot: sp|O64973|RPS5_ARATH Disease resistance protein RPS5; TrEMBL-Plants: tr|G7JRW4|G7JRW4_MEDTR LRR and NB-ARC domain disease resistance protein, putative; Found in the gene: LotjaGi4g1v0050000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:6077163..6081807) extracted from Lotus japonicus Gifu genome v1.2.
AAAATGTTGATGTTCCCATTGAAAATACATACAGCCTAGTTGAGCCTGCTTATAATTGGGAGACGGGTAATGATATGCGG AAGGACAGGGACTCTTGAAGAGAAGTCGTTGTAATCTGTAAGAAAGGGCTACGCATTGGAGAGACATTTTTGAGGTAAAC AAGCCATAAAAACAGTTGAAGACTACTGAGTTTCTTTCTCCTCCATTTCAAAGTTTCAGAAGTGCATCCACCTCCCACAC AACAGTTGGAGACTCACTGATTCTCCATCTCTGAAAACTCACAGGTTAGAGAGTTATTTGTTAAAAAAAATTATGTATTT TTAGAACACTTTTTTATACTACTGAACATTACTGATGATATTTAGCTTATGCATTAATTAAAGACCGAGGCCCCATAATA TTTTGGTCAACCTCCGCCAATGTTTGTATAGTTCATCATTCTTTTTCAAAATTCTCATAATTATTGGAATTTGGGTTAGG AGTAACTTTACCCAAAAGCTAGTTTAGTGGTGAAGATTGTTCTACCATATATAAGGATCACTTTGGTCATATGTTAGTTA ATGTGAGATCTTAACATCCCGCTCACGAGTCACGACTTAGGCTGGACATTTAGAGCGTGAAAATTGTTTGAATGAACATC TGCCGGTTACTCATATACACGTGTAGTATAATAGTATCCAATAAATGAATACAGGATAACTTCTATAGATTGTAAGCAAT AATAAGAATCATATTATATAAGCAATAGACTTTTAAAATAAATTCTGGTGATAGTTGACTTCGTTAAAAATGACAGCATT TGCGTGGAAGGTACTTCAAGATAGAGTTCCAGAGGGTCAATTTACACAGAATGGAAATCTTACCACTTCAGTGATGCATG ATTGGGAGTACAAGCAAGAAATTGAAATCGCAAAGCACTTGTTTCTTTACTGTAAGTTTTCTTAGTACCTTTGGCAAATA ATCTGTACATGGTTTGGTAAAGGAAATTGCATTACCAGGTAGACATCATTTAGTTTTGACTCAATGCATCAAGTCACATG TACCTTGGAATAATATGTGTTACGTACTTTAATTTGATCAGTATAATTGCTGCAAAGAAACCAGATTACTTTAAATTCTT CAACTCAAAGTGGATGATCAAAGAAGAACTGTAGTTTATTAAGGTTAAGGATCGGTTGTGCAGTGTGGATAAAAGTAAAA ATAGAAGAGGCTAGAGTATGCCTCATATGAGTGGTGGACTGGTGGGTGAATCCTTAGTACCATTTGAAGTTTGTTTCTTT ATGTGTTAGATGTTTGCTTATCTATACATGCTGCTTGGTGCTTATATATCTTCTATGAGCAACATTTGATATTCCTGCCT AGAGTTTCTTTTTAACTTTGTTTTTCCATTAAAATAAAAAAGAAAAGTAAAATGCAAGTATTACCTTTTTTTAGATACAG ATCAAAGCCATGGAGGTGGCAGCAGGATTACTGTTGGATGCTGTTATTCGTTTGTTAAGTTGTGGTAAGGTCCATGCTGC CTATGTTTATAAGCTGGAAGAGAATCTAGCATTGTTGCAAAAAAAGTGGATTGATCTTCAGAACTTAAACACCGATGTGC ATAGAAGAATTGATGATGCTGAGGGCATGGGGGAGATGCAAAGGGCAGATGAAGTGAATGGTTGGCTGCAAGATGTTCAA GATCTTCAAAAGGTATCCAATTATAAATGCTATAGTTTATATGAGAAATGCTACTAAAATATTCTTCAACGCACTCTACG TGATTGATTTAAATTTTTTGAAGAGCAACACATTTTTGAAAAAGGGAGGTAAATGTCTTAACTTTAAAGCTTTGCAAGGG AAACAAAAGACTAACTAGACTGTTTATGTTGACACATGTTTACCAAGACTTGCTATATATATGTACTAGGTAATGGAGGA TATTCAAGATGAAGATTCTCAAGAAACTCAAAATAAATGTTCAAGTGGTTGCTGCCAAAAGAACTGTATGTTAAGCTACA AGTTAGGAAAGAAAATCGTGAAGATGCTCAATGAGGTTGATCGATTAGTGAACTCGGGTAAACGTTTTGTTGACATGAAT GTTTATATTGCTTACAAGCTTCCACCCAAGCTAATGAATGAGATGCCTTCAGTTGAGACCGTAGGCTTGGACTTGATGCT CAACCAGGCGTGGAATAGTCTTGAAGATGACAATGTGGGAATCATTGGTTTATATGGAATGGGTGGCGCTGGGAAAACGA CCCTTATGATGAGAGTTCACAATGAATTTGGAAAGAGGGAGCACAAGTTTTCTCTTGTACTATGGGTGGTGGTTTCTAGA GATTGTGATATCAATAAGATTATGAATGATATTCGTAACAGGTTAGGCATCATTGATGATGTTTGGAACAAAAGCAGCCA ACATGAAAGAGTGACAAGGATTTATGAAGTCTTGAAACAGAGGAAATTTGTGTTGATGTTAGATGATGTATGGGGAAAGT TGGAACTAGAAATGGTGGGGGTTCCACTTCCAAAGGATACTAACAATCAATCAAAAGTTCTGTTCACAACACGTCTTGAG GATGTTTGTGCGAAAATGCAAGCTCAGAAGAAATTCAAAGTGGAATGTTTACTAGAGCAAGAAGCATTTGATTTGTTTTG TAAAAAAGTTGGTGATGAGACTTTAAAGAGTCACCTAGAAATTCCAAGGCTCGCATGGGAGATGACTAAAGAATGCAAAG GATTGCCACTAGCAATTATTACAGTGGGAAGTGCCATGGCTGGAGTGAAAAGTGTTGAAGCATGGAGACAAGCCAAAAAT GATTTAAGAAGTTCTCCTTGGATTGCTTCATATTTGGAGAACGAAGTCTTTCGTATCCTTAAGTTTAGTTATGATAGATT GCCAGATGACGCACACAAAAACTGTTTCCTGTACTGCGCACTATACCCAGAAGATTATGAAGTAGGAGTTGATGTTCTCA TTGATAGATGGATTGGAGAGGGATTTCTGAGTGGAAATAAGACCAAGAAGAGTATTTATGATATGTATGAGCAAGGAGAA TCTATCATTGAAAAGTTAAAACTTTCATGTCTCCTAGAGGGTGTTGAATATGATTATTTTTGGACTTCGGCGATTAAGAT GCATGATGTGACTAGAGACATGGCACTTTGGATAGCCCGTGATCAAGATGAAAACAAAGGAAAAGTTGTTGTTCAGGGAG AAGCATTAGCCATGTCTGAAATGGATGTTGATAGGTTGAATATTGTGGAAAGGATTTCAATTATTGATGCTAGTGGAAGT TGGAACTGGCAAGTACCAACTTGTCCAAATCTGATCACCCTATGTATTCTAGATTATGTGAACACTACATTTTATTCAAA TCTCCAATCCATGACAAGGTTGAAAGTCTTGGATCTATCTGGTAAATCTTTTGAACATCTCCCTGTAGAAATTGGCAACT TAATCAACTTGGAATTCCTTAACCTGACAAGAACAGATATAAGAAATCGGTTGCCAATTGAATTGAAGAATTTGAAGAAC GTGAGGGTATTTCTTATGGAAGGTTGCCCACATAATCTCGAAATCATTCCTTTGGAAGTGATAGAAAGCCTTGAGCAGTT AAAGGTGTTTAGATTTACTAGTGAGGATAAGGCTGGTGAACTTTTTGAGGAAGCATTCTTACAGAAGCTGGAGTCCTTAC CAAAATTGGAAGAAGTATCCATGGAAATAAACACCTTCACGGGCATGCATAAATTGATTGACTCGACCAAATTGCAAGGT TGCTGGAGACATTTTTCAATTCAGGGAATCGATGATCCACTTGAAATGTCACCATTGTTAGCATCTATGTCAAGAATGAA GCATCTGTACCGTATAAGTTTATACTCTATTAACATTATTGAAGGCTCGTCCATCACTAACACTTGCTACCTTCACAAGC TTCGCCGGGTGTATGTCGAGAGTTGTGACTCAATAACTCATTTGACATGGTTGATATATGCTCCACTTCTTGAGTTTCTT GAGGTTCGTAACTGTGATTCCATTGAAGAACTAGTGAAGGAAGCTCAAAATGATATATTCCAAAATCTTAGACTTGTCCG CCTTTATGGTTTGGCAAAGTTGAGGAGCATCCACAAGAGCGCATTGGATTTTCCTTTTCTGGCATATCTTCATGTATATG AATGCCCCGATTTGAAGAAGCTCCCTTTGAATTCTAATTCTGCAAAGGACTTGATTGCAATCAAAGGACAGAAAGAGTGG TGGAACAGTTTAGAGTGGCAAGACACAGACATTAAAGAGCTACTCCATTCCAAATTTAGAGCACGGTAAATTGGAGGAAA AGTATGCTACTCAGAAATTTATTTCTTCTTCATTAAAGAGTGTATCATGGGAAGCGTCAATGGTTTTGCAAGCACTGCAT TTGAGAGTTGAAAATTTCTTGAGCACTTGTGATTAATGGTTTTGTAAATTCTTCATGCTTTTGTGCTACTTTGGATAGAA ACTGTTTCCTCATTCATTTCCACATTTAGGGGTCGTACTTGTATCAGCTGGCTTATTTTATTTATTATTGGCAACTGATG TTTACTGTATTTCACGTTTGCAACTTTAAATTACTTCTTTGTTCAAATTATTCAGATTGACAGATTCTTAAATATACCAT CCTCT
CDS sequence (LotjaGi4g1v0050000.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTGGGAGTACAAGCAAGAAATTGAAATCGCAAAGCACTTGTTTCTTTACTATACAGATCAAAGCCATGGAGGTGGC AGCAGGATTACTGTTGGATGCTGTTATTCGTTTGTTAAGTTGTGGTAAGGTCCATGCTGCCTATGTTTATAAGCTGGAAG AGAATCTAGCATTGTTGCAAAAAAAGTGGATTGATCTTCAGAACTTAAACACCGATGTGCATAGAAGAATTGATGATGCT GAGGGCATGGGGGAGATGCAAAGGGCAGATGAAGTGAATGGTTGGCTGCAAGATGTTCAAGATCTTCAAAAGGTAATGGA GGATATTCAAGATGAAGATTCTCAAGAAACTCAAAATAAATGTTCAAGTGGTTGCTGCCAAAAGAACTGTATGTTAAGCT ACAAGTTAGGAAAGAAAATCGTGAAGATGCTCAATGAGGTTGATCGATTAGTGAACTCGGGTAAACGTTTTGTTGACATG AATGTTTATATTGCTTACAAGCTTCCACCCAAGCTAATGAATGAGATGCCTTCAGTTGAGACCGTAGGCTTGGACTTGAT GCTCAACCAGGCGTGGAATAGTCTTGAAGATGACAATGTGGGAATCATTGGTTTATATGGAATGGGTGGCGCTGGGAAAA CGACCCTTATGATGAGAGTTCACAATGAATTTGGAAAGAGGGAGCACAAGTTTTCTCTTGTACTATGGGTGGTGGTTTCT AGAGATTGTGATATCAATAAGATTATGAATGATATTCGTAACAGGTTAGGCATCATTGATGATGTTTGGAACAAAAGCAG CCAACATGAAAGAGTGACAAGGATTTATGAAGTCTTGAAACAGAGGAAATTTGTGTTGATGTTAGATGATGTATGGGGAA AGTTGGAACTAGAAATGGTGGGGGTTCCACTTCCAAAGGATACTAACAATCAATCAAAAGTTCTGTTCACAACACGTCTT GAGGATGTTTGTGCGAAAATGCAAGCTCAGAAGAAATTCAAAGTGGAATGTTTACTAGAGCAAGAAGCATTTGATTTGTT TTGTAAAAAAGTTGGTGATGAGACTTTAAAGAGTCACCTAGAAATTCCAAGGCTCGCATGGGAGATGACTAAAGAATGCA AAGGATTGCCACTAGCAATTATTACAGTGGGAAGTGCCATGGCTGGAGTGAAAAGTGTTGAAGCATGGAGACAAGCCAAA AATGATTTAAGAAGTTCTCCTTGGATTGCTTCATATTTGGAGAACGAAGTCTTTCGTATCCTTAAGTTTAGTTATGATAG ATTGCCAGATGACGCACACAAAAACTGTTTCCTGTACTGCGCACTATACCCAGAAGATTATGAAGTAGGAGTTGATGTTC TCATTGATAGATGGATTGGAGAGGGATTTCTGAGTGGAAATAAGACCAAGAAGAGTATTTATGATATGTATGAGCAAGGA GAATCTATCATTGAAAAGTTAAAACTTTCATGTCTCCTAGAGGGTGTTGAATATGATTATTTTTGGACTTCGGCGATTAA GATGCATGATGTGACTAGAGACATGGCACTTTGGATAGCCCGTGATCAAGATGAAAACAAAGGAAAAGTTGTTGTTCAGG GAGAAGCATTAGCCATGTCTGAAATGGATGTTGATAGGTTGAATATTGTGGAAAGGATTTCAATTATTGATGCTAGTGGA AGTTGGAACTGGCAAGTACCAACTTGTCCAAATCTGATCACCCTATGTATTCTAGATTATGTGAACACTACATTTTATTC AAATCTCCAATCCATGACAAGGTTGAAAGTCTTGGATCTATCTGGTAAATCTTTTGAACATCTCCCTGTAGAAATTGGCA ACTTAATCAACTTGGAATTCCTTAACCTGACAAGAACAGATATAAGAAATCGGTTGCCAATTGAATTGAAGAATTTGAAG AACGTGAGGGTATTTCTTATGGAAGGTTGCCCACATAATCTCGAAATCATTCCTTTGGAAGTGATAGAAAGCCTTGAGCA GTTAAAGGTGTTTAGATTTACTAGTGAGGATAAGGCTGGTGAACTTTTTGAGGAAGCATTCTTACAGAAGCTGGAGTCCT TACCAAAATTGGAAGAAGTATCCATGGAAATAAACACCTTCACGGGCATGCATAAATTGATTGACTCGACCAAATTGCAA GGTTGCTGGAGACATTTTTCAATTCAGGGAATCGATGATCCACTTGAAATGTCACCATTGTTAGCATCTATGTCAAGAAT GAAGCATCTGTACCGTATAAGTTTATACTCTATTAACATTATTGAAGGCTCGTCCATCACTAACACTTGCTACCTTCACA AGCTTCGCCGGGTGTATGTCGAGAGTTGTGACTCAATAACTCATTTGACATGGTTGATATATGCTCCACTTCTTGAGTTT CTTGAGGTTCGTAACTGTGATTCCATTGAAGAACTAGTGAAGGAAGCTCAAAATGATATATTCCAAAATCTTAGACTTGT CCGCCTTTATGGTTTGGCAAAGTTGAGGAGCATCCACAAGAGCGCATTGGATTTTCCTTTTCTGGCATATCTTCATGTAT ATGAATGCCCCGATTTGAAGAAGCTCCCTTTGAATTCTAATTCTGCAAAGGACTTGATTGCAATCAAAGGACAGAAAGAG TGGTGGAACAGTTTAGAGTGGCAAGACACAGACATTAAAGAGCTACTCCATTCCAAATTTAGAGCACGGTAA
Protein sequence (LotjaGi4g1v0050000.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIGSTSKKLKSQSTCFFTIQIKAMEVAAGLLLDAVIRLLSCGKVHAAYVYKLEENLALLQKKWIDLQNLNTDVHRRIDDA EGMGEMQRADEVNGWLQDVQDLQKVMEDIQDEDSQETQNKCSSGCCQKNCMLSYKLGKKIVKMLNEVDRLVNSGKRFVDM NVYIAYKLPPKLMNEMPSVETVGLDLMLNQAWNSLEDDNVGIIGLYGMGGAGKTTLMMRVHNEFGKREHKFSLVLWVVVS RDCDINKIMNDIRNRLGIIDDVWNKSSQHERVTRIYEVLKQRKFVLMLDDVWGKLELEMVGVPLPKDTNNQSKVLFTTRL EDVCAKMQAQKKFKVECLLEQEAFDLFCKKVGDETLKSHLEIPRLAWEMTKECKGLPLAIITVGSAMAGVKSVEAWRQAK NDLRSSPWIASYLENEVFRILKFSYDRLPDDAHKNCFLYCALYPEDYEVGVDVLIDRWIGEGFLSGNKTKKSIYDMYEQG ESIIEKLKLSCLLEGVEYDYFWTSAIKMHDVTRDMALWIARDQDENKGKVVVQGEALAMSEMDVDRLNIVERISIIDASG SWNWQVPTCPNLITLCILDYVNTTFYSNLQSMTRLKVLDLSGKSFEHLPVEIGNLINLEFLNLTRTDIRNRLPIELKNLK NVRVFLMEGCPHNLEIIPLEVIESLEQLKVFRFTSEDKAGELFEEAFLQKLESLPKLEEVSMEINTFTGMHKLIDSTKLQ GCWRHFSIQGIDDPLEMSPLLASMSRMKHLYRISLYSINIIEGSSITNTCYLHKLRRVYVESCDSITHLTWLIYAPLLEF LEVRNCDSIEELVKEAQNDIFQNLRLVRLYGLAKLRSIHKSALDFPFLAYLHVYECPDLKKLPLNSNSAKDLIAIKGQKE WWNSLEWQDTDIKELLHSKFRAR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Coils | 92 | 112 | 21 | - | – | |
| PANTHER | 113 | 729 | 617 | 1.3E-113 | – | |
| PANTHER | 113 | 729 | 617 | 1.3E-113 | – | |
| SUPERFAMILY | 170 | 440 | 271 | 6.89E-54 | ||
| Gene3D | 172 | 336 | 165 | 1.1E-27 | – | |
| CDD | 182 | 322 | 141 | 0.00274317 | – | |
| Pfam | 187 | 426 | 240 | 8.5E-66 | ||
| PRINTS | 202 | 217 | 16 | 2.1E-21 | – | |
| PRINTS | 278 | 292 | 15 | 2.1E-21 | – | |
| Gene3D | 340 | 409 | 70 | 3.5E-5 | – | |
| PRINTS | 373 | 387 | 15 | 2.1E-21 | – | |
| SUPERFAMILY | 507 | 874 | 368 | 2.04E-30 | – | |
| Gene3D | 535 | 679 | 145 | 8.1E-13 | ||
| PRINTS | 590 | 606 | 17 | 2.1E-21 | – | |
| Gene3D | 680 | 891 | 212 | 4.4E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi4g1v0050000.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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