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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0064700 |
| Transcript ID | LotjaGi4g1v0064700.1 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Rac-like GTP binding protein; TAIR: AT5G45970.1 RAC-like 2; Swiss-Prot: sp|Q41253|RAC13_GOSHI Rac-like GTP-binding protein RAC13; TrEMBL-Plants: tr|I3SWP7|I3SWP7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0064700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:8091777..8099231) extracted from Lotus japonicus Gifu genome v1.2.
ACTATACCTACTTTGTTACCATATCTGCTTTTGTCCTTGCACTTAAAGAAAAGAAAAGAAAAAGCTTTTGGGGGCAAATG ATTATAAATTTGATCAGTTCCATGAGCAAACAACTAAAGTAAGTAGGTAATAGATTTGCTTCTAGGTCCTTTCACTTTTT CCATTATTTCTAGCTCAGACTTCTTCATAAATATTGTTCCAATTTCTTTATAAGTATAGAGTATTTTTCTTAGTTAAGAA TAGAAGAAGAACCAGAGAAGAAGAAGAATGAGTACAGCCAGATTTATCAAGTGTGTAACAGTTGGGGATGGAGCTGTGGG AAAGACATGCATGCTTATATCCTATACCAGCAATACCTTTCCTACAGTATGTTCCAATTAGCATACTTATTGGTCATGGA AGGTTCAATTGTACATATATATACAGGGTTTAAAATTGTGGTTGCCATTGCCACTGTGTCGCAGAATTGCAGACAAGTGG AGGGTGATGCGGTTGCAATTCCGGTCTCTAGAACCGTTACGTTGCGGCTGCAATCGCAGTTGCGGACGAAAATTTGAAAC CCTGCATATATCTATGAACTGGAATCATGGTTTCAGGAGCTAGTTTTGAAGCTAATGCTCTTTCTTTTGCTATGGTTTTC TCTTTGTTAGGATTATGTTCCAACAGTGTTTGACAACTTCAGTGCCAATGTTGTGGTGGATGGTAGTACAGTTAATCTTG GTCTATGGGACACTGCAGGTTTGTTAATCTTCTTTCTGAGGGCTATGTTTCACATTCACTTTAAATGCCAAATTTTGATG AATGAAAATATTGTGTTTGCTTTGTATAATTTGTGTGGTTACAGGACAAGAAGATTACAACAGGCTAAGGCCTTTGAGTT ACAGAGGAGCTGATGTGTTTTTGCTGTGCTTTTCTCTAATTAGTAAAGCAAGTTATGAGAATATTTCCAAAAAGGTTTTT TAACTATCTGCCCCAAATCCTCTTGTTCAGTTACTGTAATTTGGTTTTCAGTTGAATTGTGATGTGAAATCCTTAAAACA TATGTATTTGTTGGATTCTTGACAAACAGTGGATACCTGAGCTGAGACATTATGCTCCAAATGTGCCTATTGTGCTGGTG GGAACAAAACTAGGTATGATAATTCCATCAAAGTAGCATAGCAAAATTCATCATAATTTGTCAGTAATGATAGTCTTCTT CATATTCCTCTCTCTCTCTCTAGCTATTCAACTCTACTTCTGTACAATTGTGAAACTTCCATAATTAAACATTAACTAGA GATCTAGCTAAATAAGTCCTTATAAAGGGGAGGGAAACCAGGGCAACGCTCACCAAAGTTTAAAACTGTGGTCGCGGTTG TGGTTGTAGTTAAATTGCGGGATTACAGACAAATGCGGGTGAATGCGGCTGCAATTGCAGTCACGATTGTGGGTGTCAAG AATAATTGGCTTGATGCCTTCTCTGATTCTATTCTCTTCTATATATAATACAATTACATTTACAAGCAATAATGACTAAT TAACCCTAATTCCTAATTTGCACAACCTAAATTAGGAAGTCTAATTCTGTACATTCAAATAGGAATATTCTTGATTCTAT TTCCTAATTTCTCAAACATAAAATAGGAAACAATCATTAATTGCAGATATCCTCATTGACATCCCCCCTCAAATTGATGC GGTTTGTCAAGAAGCATCAATTTGCTAAGAAGAAACTGGTGACGGGCACGAGGAACCGCTTTAGTGAAGATATCTGCAAG CTGAAGCTGCGAGGAGACATGAGGAAGAGAGATAACATGATCATCAAGAGCCTCACGAATGGAGTGACAATCCACTTCAA TATGCTTAGTGCGCTCATGAAAAACTGGATTAGTAGCAATCTGAATAGCGCTTGTGTTGTCAGCATGGAGAGGCGTAACA TTGATTTGAGGGAATCCGAGTTCAGCCAATAAACCACGAAGCCAAGTTATTTCAGAGCAAGCAGTGGACATAGCTCGATA TTCAGACTCAGTGGATGACTTGGAAACGCGGGCTTGCTTTTTGCTCTTCCAAGAAATTAAGGCCGGACCAAGGAACATGC ACCAACCGGACACCGACCTTCGTGTATCAGCACAACCTGCCCAATCAGCATCACTATAGGCAAGCAAAGTAAGAGATGTA CTGGCCGGAAAAAATAATCCTCGATAAGACGTTCCTTTCAAATAGCGAATGATGCGACGAACAGCAGCCAAGTGAAGATG ACGAGGAGTGTGCATGAATTGACTAACTTGTTGCACTGCAAAGGAAATATCTGGACGTGTAATAGTCAAATAGTTAAGAC TTCCCACCAATTGACGATACAATAAAGGATCAGGCAAAAGATCACCCTCATCACGATGATATTTGACATTAACTTCAAGA GGAGTATCCACAGGGACAACAGATTGAAGACCAGCCAAAGAAACTAAGTCCTCAGTATACTTGTGCTGATTGAGAAAAAT ACCTTTGGAGTCAGAATGAACCTCAAGCCCCAAGAAATAGTGAAGATACCCAAGATCCTTCATGTGAAAGGAAGCTTGAA GCTGCTGTTTAAGTAGTTGTATGGACGCTTGATCAGAGCCAGTAATGATCATGTCATCAACATAAATGAGAAGAAGAACA ATACCAGCGGACGTGTGATGAATGAATAAGGAGGAATCATATTGGCTCTGAGAAAAAGAGAATCCAAGAAGGGTAGACCG AAATTTCTCAAACCATGCCCGAGGAGCCTGCCGCAAGCCATATAAAGAACGCTTGACTTTGCACACGCCTTCAGAGGAAG AAAACAAGCCTGGAGGAGGTTTCATAAAAATATCTTCTGCTAAATCACCATGAAGAAATGCATTCTTCACATCCATTTGA TATAGGGACCAACCTTTAGAGGCAGCAATAGAAAGGATTGTGCGGACAGTGGTCATCTTTGCCACAGGTGCAAAGGTCTC ATCATAATCCACCCCGTATTCTTGTTTGTTACCCAAAGCAACCAACCGGGCCTTATAACGATTGAGAGAACCATCAGAAT TTAACTTCACAGAGTACACCCATTTGCAACCAATGGGTTTAACACCAAGAGGGCAAGGGACTATGTCCCAAGTGAAATTC TCCTGAAGTGCTTGTAGCTCATCTTGCATGGCCTTTACCCAACGCATGTCCTTAACAGCCTGCGAATAACATGTGGGAAT AGGTATACTAGATAAAGTAGCAGTAAGAGAAGTAGGCTCCCATCCATACCTATTAGGTGTTCGATGCAGGCGAGTGGATC GACGCAGGGTAACTGGTGCTGGTTCAGGCGGAGGATCAGCATCGGGAGGGGGCAAAGTAGGAGGTCGTCTAGTATACACC TGTCCAGGTTTAAAACGTTCTATAGGACGAGGAACATCAGCAAAGGTATGAAGAGGAACAAAACTGTTAGAATCAGAAGG AAAACATGGAAAATAATATTGATAATCAAAGAAAACCACATTTCTAGAAATGCGCATGCGTTGAGCAATGACATCATAAC ACAAAAATCCCTTTTGATTAGGAGAATAACCCATAAAGGCACACTGCACAGATTGCGCGCCGAGTTTATGACGCTCTAGA GGTGGCAAGTGCACAAAGCAGACACACCCAAACGTGTGAAGGTCATCATAACTTGGCTGTGTGTTATAGAGACGAAAGAA AGGAGAATCAAAAGCCAAAACCTGAGATGGGAGGCGGTTGATCAAGTATACAGCCGCAGACAAAGCTTCAACCCAGAATT GAGAAGGAACAGAGGCTTGAAGCAGTAATGTTCGGGTAACATCAAGCAAGTGCCGATTTTTGCGTTCTGCAACGCCATTT TGCTGCGGCGTATATGGACAAGAACATTGTGAAAGAATCCCCTTCTGCCGCAAGTACTCTTGAAAGTTGTGAGAGATATA TTCCCCACCAGAATCAGTACGCAAAACCTTGATACCTGTGTCAAACTGAGTCTCTATATATGCCAAAAACTGTTTAAACA TACAAAAGACATCAGATTTAGAGCGGAGAAAATAGATCCATGTAAACCGGCTATAGTCATCAATAAAGGTTACAAAGTAT TTATACTTTGCATGAGACAAGACCGGTGACATACCCCAAACATCACTATGAATAAGATCAAAACATTTAGTGGCACGATG AGCTATAGAGGGAAAGGGAAGAGTCTTGCTTTTAGCAAGTTTGCACACAGAACAATCAAATGCAGAAGTAGGAATAACAA TTTTATTACTCAACAATCCAGATTTCAATAAATGAGCTAAAACAACTGAGTTTGGGTGACCCAATTTTCTATGCCAGTCC TCATACTTATTTGGGACACCATTACAAGCAAAAGACAAAATATTCGACAGAGAAAACTGGAGAGGAAATAGTCTGCCCAC TTTAGGCCCCCTCGCGATCACTTTCCCCGACGCCTGATCCTGCACAGAACAACCATCACGAGAGAAATTAACATTACAAT TGTTATCGACCAATTGTCCAACGGAAATCAAATTGGAAACAAGCCCTGGGGAAACAAACACATCTCGAAAGGAGGAATTG ATGTCTCCAACAGCAGAAATAGAAAGAATATTACCATCAGCAATTTGGATATTTTGGGTGCCATGATAAGTGTGAACATT GTGCAATTTTTCAAGGGAACCAGTCATGTGGTTAGAGGCCCCAGAATCAACAAACCAAGGTTGAGATGTAGGTTTGGACT TACCTTGAAGGCCCAAGGCAGAAAGAGCTGCGAGTACCATTTGTTGTACGGCCTCGGGAGTCAAGGAAGCAGCACTAGAA GTTGTAGGAGCAGAAGTCTGGTCCAGAGAAGTTGTAGTGGCGTGTAAGGCATGCAACGGCTTCCGCGGGGGTCGAGTTGG GCAATCTGCGAGGATGTGACCCTGTTGCTTACAATAGTTGCAAAATTTCTTACTGCAATTCCGAGCAAGATGACCAAATT GCTTGCAAGAAAAGCATTGAACTTGGCGCATATCACGACCTTTGCCTTTACTTTGGGCAGCGTAGGCAACAGAGACAGGA TCAGCAACAAAGTCACCACGGGATAAGGTCAGAAGACGCTGCTCTTCTCGAAGTAATTCTGCAAGACACACGTCCAAGGA AGGGGCTGGATTCCTGTTCAGCAAAGCAGCACGCACAGCTTCAAATTCAGGTCGAAGCTTCATGAGAAATTGGTCCCGTT GGCTAATCTGATAAACTTTTTGGACAGCAGTGAGTGAATCTTTAGAAACATCAGCGTGTAAGATTGCTGAATGATCAGCC CAAAGAGTAAGGAACCCGGAGTAATAGTCCTGAATAGAGAGATTTCCCTGACGATAGTTAGCAATGTCGAGCTCCAACTG GAACCGTTTGGCAACATTGTCCTGATTGTAAATACGCTTCAGATAGTCCCACATATCTTTAGCAGTAGAGAAAGCACGTA AGTTGTTGATCATGTGAGGTTCAACAGAAGCCAGAATCCAGGTTATAACTTGGGCGTCCTTTGTTTGCCACGCCGCCAAT GTCGTTTTCTCTGCCGGAGCAGTGGACTGAGCTACATGATCGTCCCAAAGGCCTTTCCCTTTCACGAACATTTGGAACTG AAACTCCCAAGCGCCATAATTTTTGCCCGTAAAGCGGACACAGAAGTTTTCAAAAGTCTTTTCGGAAGCCATGAGGAGCA AAGCAAACTGACCAGAAACAAGATAGCACAAAAAAAACAGCAACGTTCCAGAAACAGAACAGCAAGAAAAGAAACAGAGC AGCGAACCAGGAATAAAAGCAACGAACCAGGATGGGCTACAGCAGCACAACACGAACCAGAATCAGAGCAACGAACCAGA GAGCCAAGATGAACCACGAAGGAGGCACGATGTTGATACGGATAGAAGAAGCAAGAGCGTGTCGCTCTTAGCACACAAGG AAACGGCACAAGAGAAGTGAGAAGACTCGTGATACCATGTCAAGAATAATTGGCTTGATGCCTTCTCTGATTCTATTCTC TTCTATATATAATACAATTACATTTACAAGCAATAAGGACTAATTAACCCTAATTCCTAATTTGCACAACCTAAATTAGG AAGTCTAATTCTGTACATTCAAATAGGAATATTCTTGATTCTATTTCCTAATTTCTCAAACATAAAATAGGAAACAATCA TTAATTGCAGATATCCTCATTGACAGTGGGAACTAAAAACCCTTAATGTTTGCGGCTGCAATTGTAGTTTGTGGCATGAC AGAAAATAGAGGAAATAAGACCAAGTTACATATTTGAGATCATCAATATGTCTAATGTTTAAACAGTTTCATATGTGAAA TCTTCCATTTCGTGCAAAGTTTCAGTTGGTCATTGCTTATAAAACAAGCAATGCTTATAAATCATAACTTTTGCTAATGA ACTTCAAGGCTAACAGTAGTTTTTTTTTAAATCTTATGTATGTACAGATTTGCGAGACGACAAGCAATTTCTGATTGATC ATCCTGGAGCCACAAGAATAACAACTGCTCAGGTAAGTCCACAACAAATTTAAAATAAAACAAAAAAATAAAAGATGCTT ATGATTTAACAATGATTGTGTTAAGCAGGGTGAAGAGTTAAAGAAGCTGATTGGTGCAGTCACTTATATTGAGTGCAGCT CTAAAACTCAGCAGGTAAATTATAACCATTTCATTGGACTCAGCATCTTTTAGCCATATTTTGTAGCAAACTCAAACTCT AGATTAAGATGTAGTTAAAGGAACTTGTGATCTCTGTAAGTATTCAATTAAATGCAGTAATAGGTGATCCCTGATTCTAT CTATTCAATTGCATTGAGAATTACTGTTATAGCATGTTCGGATCAACTTATTTTCCCTCATAATCAATCCTGGCATTCTG AAGCTACACACATAAGTTTCTCATGAAAGTTGATTTTATCTTTAGAATCAAATGTCGAAGAATTGCCAACATGTACTTAA GCAGTTGAAAGAATTCACACTTTTTTTTGTTGCAGAATGTGAAGGTAGTTTTTGATGCTGCAATAAAGGTTGCATTGAGG CCACCAAAGCTAAAGAAGAAACCGCACAAGAAAAGGACCTGCACTTTCCTTTAGTATTTCATATTCAGTTATATTTCACT CAAAATCAAGTATATGACAGAATTGAAACCTAAATTCCAGTGTTTTGTGGTTCCAATATATAAAGAGCTTCTGGGGTTTT GGATGACCTCTGTAAAGAAATTTAGATTCCTCATGAAGTGTAATCAATGGAAAATGAACTCAAGTATTGCATTGTTGAAT TAATTATTTTATTTTACCAGTGTTAGTTGATCTTACTTTTGTGGCATTGTTTCATCTAAACATTTTGTATAATAAGGCCT TCTAGTTGCAATTGGAATCCAGTTTTATTAATTCCTTATCTGCTGTTTCTAATTTCTATCACCTAGGAATGTTCTCTTTC AAATCATCAGCATCT
CDS sequence (LotjaGi4g1v0064700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTACAGCCAGATTTATCAAGTGTGTAACAGTTGGGGATGGAGCTGTGGGAAAGACATGCATGCTTATATCCTATAC CAGCAATACCTTTCCTACAGATTATGTTCCAACAGTGTTTGACAACTTCAGTGCCAATGTTGTGGTGGATGGTAGTACAG TTAATCTTGGTCTATGGGACACTGCAGGACAAGAAGATTACAACAGGCTAAGGCCTTTGAGTTACAGAGGAGCTGATGTG TTTTTGCTGTGCTTTTCTCTAATTAGTAAAGCAAGTTATGAGAATATTTCCAAAAAGTGGATACCTGAGCTGAGACATTA TGCTCCAAATGTGCCTATTGTGCTGGTGGGAACAAAACTAGATTTGCGAGACGACAAGCAATTTCTGATTGATCATCCTG GAGCCACAAGAATAACAACTGCTCAGGGTGAAGAGTTAAAGAAGCTGATTGGTGCAGTCACTTATATTGAGTGCAGCTCT AAAACTCAGCAGAATGTGAAGGTAGTTTTTGATGCTGCAATAAAGGTTGCATTGAGGCCACCAAAGCTAAAGAAGAAACC GCACAAGAAAAGGACCTGCACTTTCCTTTAG
Protein sequence (LotjaGi4g1v0064700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADV FLLCFSLISKASYENISKKWIPELRHYAPNVPIVLVGTKLDLRDDKQFLIDHPGATRITTAQGEELKKLIGAVTYIECSS KTQQNVKVVFDAAIKVALRPPKLKKKPHKKRTCTFL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 196 | 196 | 6.7E-133 | – | |
| ProSiteProfiles | 1 | 177 | 177 | 25.826 | ||
| PANTHER | 1 | 196 | 196 | 6.7E-133 | – | |
| Gene3D | 3 | 183 | 181 | 1.1E-67 | – | |
| SMART | 4 | 180 | 177 | 2.3E-24 | – | |
| CDD | 6 | 178 | 173 | 3.71736E-134 | – | |
| SUPERFAMILY | 6 | 177 | 172 | 1.09E-54 | ||
| PRINTS | 7 | 28 | 22 | 2.3E-37 | – | |
| SMART | 7 | 180 | 174 | 5.4E-27 | – | |
| TIGRFAM | 7 | 170 | 164 | 1.3E-35 | ||
| Pfam | 8 | 177 | 170 | 3.2E-53 | ||
| SMART | 9 | 180 | 172 | 7.0E-115 | – | |
| PRINTS | 30 | 46 | 17 | 2.3E-37 | – | |
| PRINTS | 47 | 69 | 23 | 2.3E-37 | – | |
| PRINTS | 109 | 122 | 14 | 2.3E-37 | – | |
| PRINTS | 155 | 177 | 23 | 2.3E-37 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. | ||
| Biological process | Small GTPase mediated signal transduction | Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals. |
Expression pattern of LotjaGi4g1v0064700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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