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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR003578
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We have found 37 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.553s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0183200.1
n.a. Rac-like GTP binding protein; TAIR: AT3G48040.1 RHO-related protein from plants 10; Swiss-Prot: sp|Q9SU67|RAC8_ARATH Rac-like GTP-binding protein ARAC8; TrEMBL-Plants: tr|I3T588|I3T588_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0183200 LjG1.1_chr1 35691738 35696564 +
2 domain predictions
2 GO terms
LotjaGi1g1v0183200.2
n.a. Rac-like GTP-binding protein; TAIR: AT5G62880.1 RAC-like 10; Swiss-Prot: sp|O82481|RAC10_ARATH Rac-like GTP-binding protein ARAC10; TrEMBL-Plants: tr|I3T588|I3T588_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0183200 LjG1.1_chr1 35691990 35694514 +
2 domain predictions
2 GO terms
LotjaGi1g1v0183200.3
n.a. Rac-like GTP-binding protein; TAIR: AT5G62880.2 RAC-like 10; Swiss-Prot: sp|O82481|RAC10_ARATH Rac-like GTP-binding protein ARAC10; TrEMBL-Plants: tr|I3T588|I3T588_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0183200 LjG1.1_chr1 35691990 35694587 +
2 domain predictions
2 GO terms
LotjaGi1g1v0430100.1
n.a. Rac-like GTP-binding protein; TAIR: AT4G35020.1 RAC-like 3; Swiss-Prot: sp|O04369|RAC1_LOTJA Rac-like GTP-binding protein RAC1; TrEMBL-Plants: tr|I3T4P6|I3T4P6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0430100 LjG1.1_chr1 92508438 92512037 +
2 domain predictions
2 GO terms
LotjaGi1g1v0430100.2
n.a. Rac-like GTP-binding protein; TAIR: AT1G75840.1 RAC-like GTP binding protein 5; Swiss-Prot: sp|O04369|RAC1_LOTJA Rac-like GTP-binding protein RAC1; TrEMBL-Plants: tr|A0A1D6GYV0|A0A1D6GYV0_MAIZE Uncharacterized protein; Found in the gene: LotjaGi1g1v0430100 LjG1.1_chr1 92508874 92510485 +
2 domain predictions
2 GO terms
LotjaGi1g1v0430100.3
n.a. Rac-like GTP-binding protein; TAIR: AT1G75840.1 RAC-like GTP binding protein 5; Swiss-Prot: sp|O04369|RAC1_LOTJA Rac-like GTP-binding protein RAC1; TrEMBL-Plants: tr|W9QZH4|W9QZH4_9ROSA Vacuolar protein sorting-associated protein 35B; Found in the gene: LotjaGi1g1v0430100 LjG1.1_chr1 92508874 92510637 +
2 domain predictions
2 GO terms
LotjaGi1g1v0430100.4
n.a. Rac-like GTP-binding protein; TAIR: AT1G75840.1 RAC-like GTP binding protein 5; Swiss-Prot: sp|O04369|RAC1_LOTJA Rac-like GTP-binding protein RAC1; TrEMBL-Plants: tr|I3T4P6|I3T4P6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0430100 LjG1.1_chr1 92508874 92511378 +
2 domain predictions
2 GO terms
LotjaGi1g1v0430100.5
n.a. Rac-like GTP-binding protein; TAIR: AT2G17800.1 RAC-like 1; Swiss-Prot: sp|O04369|RAC1_LOTJA Rac-like GTP-binding protein RAC1; TrEMBL-Plants: tr|I3T4P6|I3T4P6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0430100 LjG1.1_chr1 92508874 92511382 +
2 domain predictions
2 GO terms
LotjaGi1g1v0430200.1
n.a. Rac-like GTP-binding protein; TAIR: AT4G35020.1 RAC-like 3; Swiss-Prot: sp|O04369|RAC1_LOTJA Rac-like GTP-binding protein RAC1; TrEMBL-Plants: tr|I3T430|I3T430_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0430200 LjG1.1_chr1 92513237 92515667 +
2 domain predictions
2 GO terms
LotjaGi1g1v0558900.1
n.a. Rac-like GTP-binding protein; TAIR: AT4G35020.1 RAC-like 3; Swiss-Prot: sp|O04369|RAC1_LOTJA Rac-like GTP-binding protein RAC1; TrEMBL-Plants: tr|I3SZA6|I3SZA6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0558900 LjG1.1_chr1 109105959 109109890 -
2 domain predictions
2 GO terms
LotjaGi1g1v0558900.2
n.a. Rac-like GTP-binding protein; TAIR: AT4G35020.1 RAC-like 3; Swiss-Prot: sp|O04369|RAC1_LOTJA Rac-like GTP-binding protein RAC1; TrEMBL-Plants: tr|I3SZA6|I3SZA6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0558900 LjG1.1_chr1 109107931 109109690 -
2 domain predictions
2 GO terms
LotjaGi1g1v0558900.3
n.a. Rac-like GTP-binding protein; TAIR: AT1G75840.1 RAC-like GTP binding protein 5; Swiss-Prot: sp|Q6EP31|RAC5_ORYSJ Rac-like GTP-binding protein 5; TrEMBL-Plants: tr|I3SZA6|I3SZA6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0558900 LjG1.1_chr1 109107931 109109690 -
2 domain predictions
2 GO terms
LotjaGi1g1v0558900.4
n.a. Rac-like GTP-binding protein; TAIR: AT1G75840.1 RAC-like GTP binding protein 5; Swiss-Prot: sp|O04369|RAC1_LOTJA Rac-like GTP-binding protein RAC1; TrEMBL-Plants: tr|I3SZA6|I3SZA6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0558900 LjG1.1_chr1 109108013 109109690 -
2 domain predictions
2 GO terms
LotjaGi2g1v0219200.1
n.a. Rac-like GTP binding protein; TAIR: AT4G28950.1 RHO-related protein from plants 9; Swiss-Prot: sp|O82480|RAC7_ARATH Rac-like GTP-binding protein ARAC7; TrEMBL-Plants: tr|I3SR86|I3SR86_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0219200 LjG1.1_chr2 67440293 67445156 -
2 domain predictions
2 GO terms
LotjaGi2g1v0379300.1
n.a. Rac-like GTP-binding protein; TAIR: AT2G17800.1 RAC-like 1; Swiss-Prot: sp|Q35638|RHO1_PEA Rac-like GTP-binding protein RHO1; TrEMBL-Plants: tr|I3T9Y4|I3T9Y4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0379300 LjG1.1_chr2 87620286 87623316 -
2 domain predictions
2 GO terms
LotjaGi2g1v0379300.2
n.a. Rac-like GTP-binding protein; TAIR: AT2G17800.1 RAC-like 1; Swiss-Prot: sp|Q35638|RHO1_PEA Rac-like GTP-binding protein RHO1; TrEMBL-Plants: tr|I3T9Y4|I3T9Y4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0379300 LjG1.1_chr2 87620368 87623303 -
2 domain predictions
2 GO terms
LotjaGi2g1v0379300.3
n.a. Rac-like GTP-binding protein; TAIR: AT3G51300.1 RHO-related protein from plants 1; Swiss-Prot: sp|P92978|RAC11_ARATH Rac-like GTP-binding protein ARAC11; TrEMBL-Plants: tr|Q8S2V3|Q8S2V3_MEDTR Rho-like GTP-binding protein; Found in the gene: LotjaGi2g1v0379300 LjG1.1_chr2 87620942 87622912 -
2 domain predictions
2 GO terms
LotjaGi3g1v0448600.1
n.a. Rac-like GTP binding protein; TAIR: AT5G45970.1 RAC-like 2; Swiss-Prot: sp|Q40220|RAC2_LOTJA Rac-like GTP-binding protein RAC2; TrEMBL-Plants: tr|A0A151SEW1|A0A151SEW1_CAJCA Rac-like GTP-binding protein RAC2; Found in the gene: LotjaGi3g1v0448600 LjG1.1_chr3 86177745 86180227 -
2 domain predictions
2 GO terms
LotjaGi3g1v0448600.2
n.a. Rac-like GTP binding protein; TAIR: AT1G75840.1 RAC-like GTP binding protein 5; Swiss-Prot: sp|Q40220|RAC2_LOTJA Rac-like GTP-binding protein RAC2; TrEMBL-Plants: tr|I3SHJ4|I3SHJ4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0448600 LjG1.1_chr3 86177757 86180177 -
2 domain predictions
2 GO terms
LotjaGi3g1v0448600.3
n.a. Rac-like GTP binding protein; TAIR: AT1G75840.1 RAC-like GTP binding protein 5; Swiss-Prot: sp|Q40220|RAC2_LOTJA Rac-like GTP-binding protein RAC2; TrEMBL-Plants: tr|I3SHJ4|I3SHJ4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0448600 LjG1.1_chr3 86177771 86180204 -
2 domain predictions
2 GO terms
LotjaGi3g1v0448600.4
n.a. Rac-like GTP binding protein; TAIR: AT5G45970.1 RAC-like 2; Swiss-Prot: sp|Q40220|RAC2_LOTJA Rac-like GTP-binding protein RAC2; TrEMBL-Plants: tr|A0A151SEW1|A0A151SEW1_CAJCA Rac-like GTP-binding protein RAC2; Found in the gene: LotjaGi3g1v0448600 LjG1.1_chr3 86178663 86179807 -
2 domain predictions
2 GO terms
LotjaGi3g1v0520900.10
n.a. Rac-like GTP-binding protein; TAIR: AT1G75840.1 RAC-like GTP binding protein 5; Swiss-Prot: sp|Q6EP31|RAC5_ORYSJ Rac-like GTP-binding protein 5; TrEMBL-Plants: tr|X4YFE3|X4YFE3_LOTJA ROP5; Found in the gene: LotjaGi3g1v0520900 LjG1.1_chr3 93722910 93724289 -
2 domain predictions
2 GO terms
LotjaGi3g1v0520900.7
n.a. Rac-like GTP-binding protein; TAIR: AT4G35020.1 RAC-like 3; Swiss-Prot: sp|O04369|RAC1_LOTJA Rac-like GTP-binding protein RAC1; TrEMBL-Plants: tr|X4YFE3|X4YFE3_LOTJA ROP5; Found in the gene: LotjaGi3g1v0520900 LjG1.1_chr3 93720581 93724450 -
2 domain predictions
2 GO terms
LotjaGi3g1v0520900.8
n.a. Rac-like GTP-binding protein; TAIR: AT4G35020.1 RAC-like 3; Swiss-Prot: sp|O04369|RAC1_LOTJA Rac-like GTP-binding protein RAC1; TrEMBL-Plants: tr|X4YFE3|X4YFE3_LOTJA ROP5; Found in the gene: LotjaGi3g1v0520900 LjG1.1_chr3 93721569 93724289 -
2 domain predictions
2 GO terms
LotjaGi3g1v0520900.9
n.a. Rac-like GTP-binding protein; TAIR: AT4G35020.1 RAC-like 3; Swiss-Prot: sp|O04369|RAC1_LOTJA Rac-like GTP-binding protein RAC1; TrEMBL-Plants: tr|X4YFE3|X4YFE3_LOTJA ROP5; Found in the gene: LotjaGi3g1v0520900 LjG1.1_chr3 93721569 93724289 -
2 domain predictions
2 GO terms
LotjaGi4g1v0064700.1
n.a. Rac-like GTP binding protein; TAIR: AT5G45970.1 RAC-like 2; Swiss-Prot: sp|Q41253|RAC13_GOSHI Rac-like GTP-binding protein RAC13; TrEMBL-Plants: tr|I3SWP7|I3SWP7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0064700 LjG1.1_chr4 8091777 8099231 -
2 domain predictions
2 GO terms
LotjaGi4g1v0064700.2
n.a. Rac-like GTP binding protein; TAIR: AT5G45970.1 RAC-like 2; Swiss-Prot: sp|Q41253|RAC13_GOSHI Rac-like GTP-binding protein RAC13; TrEMBL-Plants: tr|I3SWP7|I3SWP7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0064700 LjG1.1_chr4 8091862 8099130 -
2 domain predictions
2 GO terms
LotjaGi4g1v0064700.3
n.a. Rac-like GTP binding protein; TAIR: AT5G45970.1 RAC-like 2; Swiss-Prot: sp|Q6Z7L8|RAC7_ORYSJ Rac-like GTP-binding protein 7; TrEMBL-Plants: tr|I3SWP7|I3SWP7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0064700 LjG1.1_chr4 8092138 8098964 -
2 domain predictions
2 GO terms
LotjaGi4g1v0064700.4
n.a. Rac-like GTP binding protein; TAIR: AT5G45970.1 RAC-like 2; Swiss-Prot: sp|Q41253|RAC13_GOSHI Rac-like GTP-binding protein RAC13; TrEMBL-Plants: tr|I3SWP7|I3SWP7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0064700 LjG1.1_chr4 8092473 8098964 -
2 domain predictions
2 GO terms
LotjaGi4g1v0064700.5
n.a. Rac-like GTP binding protein; TAIR: AT5G45970.1 RAC-like 2; Swiss-Prot: sp|Q41254|RAC9_GOSHI Rac-like GTP-binding protein RAC9; TrEMBL-Plants: tr|A0A0B2RGP4|A0A0B2RGP4_GLYSO Rac-like GTP-binding protein 7; Found in the gene: LotjaGi4g1v0064700 LjG1.1_chr4 8092473 8098964 -
2 domain predictions
2 GO terms
LotjaGi4g1v0064700.6
n.a. Rac-like GTP binding protein; TAIR: AT5G45970.1 RAC-like 2; Swiss-Prot: sp|Q40220|RAC2_LOTJA Rac-like GTP-binding protein RAC2; TrEMBL-Plants: tr|I3SWP7|I3SWP7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0064700 LjG1.1_chr4 8097866 8098964 -
2 domain predictions
2 GO terms
LotjaGi4g1v0064700.7
n.a. Rac-like GTP binding protein; TAIR: AT5G45970.1 RAC-like 2; Swiss-Prot: sp|Q40220|RAC2_LOTJA Rac-like GTP-binding protein RAC2; TrEMBL-Plants: tr|A0A1J7FYY7|A0A1J7FYY7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0064700 LjG1.1_chr4 8097889 8098964 -
2 domain predictions
2 GO terms
LotjaGi4g1v0130300.1
n.a. Rac-like GTP-binding protein; TAIR: AT2G17800.1 RAC-like 1; Swiss-Prot: sp|Q35638|RHO1_PEA Rac-like GTP-binding protein RHO1; TrEMBL-Plants: tr|F8TJT2|F8TJT2_LOTJA ROP6; Found in the gene: LotjaGi4g1v0130300 LjG1.1_chr4 19070557 19076345 -
2 domain predictions
2 GO terms
LotjaGi4g1v0130300.2
n.a. Rac-like GTP-binding protein; TAIR: AT2G17800.1 RAC-like 1; Swiss-Prot: sp|Q35638|RHO1_PEA Rac-like GTP-binding protein RHO1; TrEMBL-Plants: tr|A0A078CC77|A0A078CC77_BRANA BnaC07g45900D protein; Found in the gene: LotjaGi4g1v0130300 LjG1.1_chr4 19071141 19075698 -
2 domain predictions
2 GO terms
LotjaGi4g1v0130300.3
n.a. Rac-like GTP-binding protein; TAIR: AT2G17800.1 RAC-like 1; Swiss-Prot: sp|Q35638|RHO1_PEA Rac-like GTP-binding protein RHO1; TrEMBL-Plants: tr|F8TJT2|F8TJT2_LOTJA ROP6; Found in the gene: LotjaGi4g1v0130300 LjG1.1_chr4 19071141 19075698 -
2 domain predictions
2 GO terms
LotjaGi4g1v0130300.4
n.a. Rac-like GTP-binding protein; TAIR: AT2G17800.1 RAC-like 1; Swiss-Prot: sp|Q35638|RHO1_PEA Rac-like GTP-binding protein RHO1; TrEMBL-Plants: tr|F8TJT2|F8TJT2_LOTJA ROP6; Found in the gene: LotjaGi4g1v0130300 LjG1.1_chr4 19071223 19075698 -
2 domain predictions
2 GO terms
LotjaGi4g1v0130300.5
n.a. Rac-like GTP-binding protein; TAIR: AT3G51300.1 RHO-related protein from plants 1; Swiss-Prot: sp|Q35638|RHO1_PEA Rac-like GTP-binding protein RHO1; TrEMBL-Plants: tr|W9QZH4|W9QZH4_9ROSA Vacuolar protein sorting-associated protein 35B; Found in the gene: LotjaGi4g1v0130300 LjG1.1_chr4 19072390 19075698 -
2 domain predictions
2 GO terms