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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0065600 |
| Transcript ID | LotjaGi4g1v0065600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | nudix hydrolase homolog 15; TAIR: AT1G28960.1 nudix hydrolase homolog 15; Swiss-Prot: sp|Q8GYB1|NUD15_ARATH Nudix hydrolase 15, mitochondrial; TrEMBL-Plants: tr|A0A072UNI2|A0A072UNI2_MEDTR Nudix hydrolase-like protein; Found in the gene: LotjaGi4g1v0065600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:8179662..8183687) extracted from Lotus japonicus Gifu genome v1.2.
GTGAAAATGAAAGACCTAAATGACTATTCACTCATACAACAACACCTAACACTAGTTCTATGTTCCTTTTTTCGGTCTTT AACGGATGAGGCCACCTGTTCGTAAAACAATTGCATATCACTCTTAACAAATGTCTTTATTAAAATTCGAGTTTGTGTTC TCATACTTGGTCACACTTTAGATCTTGTTCCTAATTTTTTTTTTAATTTCTGCAATAAATTAATAACAACAACCTCAACA AGAAAACATAATGACAACCTTATTGAAAAACAGAGCTTTTACAAATGTATCCATGAGAGCAATAACATCCTTAGTACTTC CCAAACCACCTTTCTCCAAATTCATGGATTCTTCTTCCAACGTCATCAATGGACGATCTCAGAGGCTCTTGGCCTTGGCA CAACACCTTCGTTTGTACAAGCCACCACCACCTTTCCCTGAAGATATTGTGGAGCAGAGAATCGAAGAAAGTGGTGGCAA GGTTGTTTCCCAAGTGGGTTTTCAAGAATCAGCCACCCCAATTGCACACAACCCAGAAAAATTCAGACCCAATAAAGCTG CTGTGTTGATCTGCCTCTTTGAAGATGATGCTGGCGATCTGCGAGTTATACTCACTAAGCGCTCTTCCACGCTTTCTACT CACTCGGGTTAGTCCATTTTCTAGGAATTTTCAGCTTCATTGTTTTGTGATGATCTTGAAAATTTGTCTCCTTTTTTTGA GTTTTTGCTATTTGGGTTCTGTGAATTAGGAGGGAACAATGAACTGAGGGTTGTTTTGTGTCTGTTCATATGTGTTTTTT GCAGGTGAAGTGGCATTGCCTGGTGGGAAAGAGGAGGAGGGGGATAAGGATGATGGGGACACTGCAAAAAGGGAGGCAAA TGAGGAAATTGGATTGGACCCAGAACTTGTCAATGTTGTCACTGTTCTTGAACCATTCTTGTCTAAGGTGAATGTCCCAT TTAATACTTCACAAGCTTAAGTAATTAAGAAATGATAATTTGATAGAAAAAATTCTGGAATTAAAAGAACTCCATTCTTG AATGTTACGAGTGCATTTCTTGTAAATTTGGGATAAACTCCAATACAGTATCCACACAGTTGAATTGCAGTTGTGGTACT CAAATACGGTAGTGTCTACATTGATGGTTGTAAAAACTAAGTAATGTTACATTGAGTGGGTCATTTTGGCCTTTGCTCCC TGTTGAAGAAAATCACTGAAATGTCCCTGTTGGTGCCACCAATTGTAAAAGTCATGTATCGTTGCAGGTCATTGGAACTA AACTGGGTATTGTCTATCGCATCTAAGCAAATGCTAATACAAAATAGCTGAGAGTCAATATTCTTCATTGTCTTCTTATT TCTCCACTTCTTATTCTTTAATATATAGATGATGATGATTTGTTAAGTAAAAGAATATTTCACAAATGAACTAACTGTAG AGATTATTTAGTTTCTAGTACAAAAAGGAATAAGGTTCTGTTTGGAAGAGCTTACTTGAACTTATCTTATAGCACAAGCG CTTATGCAAACGTTATGGAGAGCTTATATAAATAGCTTATGACCTACCTATAAGTTGTTTTAAGCTTATTTTCATAAGTT GCCCATAATAGCCTATGAATAAGCGCTTATGCCCACCAAAGTACCTATAACCAGTTTTGAGCTTATTTCAATAAGCTTCT GAAATTGGCATATGAATAAGTGTATATGCGATAAGCGCTTAATTAAGCTGTTCACCCAAACGCACCCTACAAGTATATAT GTTGCCCATTAGAGTGACACTATATACTTTCGTGACAAAAACAGCACTACTAACTATTCAAAAATTTGAATAAAATAACA ACATTTTCTTGGATTGACTGTCTTTGGCAAACATTGCAGGGAAATCAGTTCACATTTAGCTATCCTTGATATGATGAATC GATTTGGGGAAATGATTGGAAATTTATTTGTTGGGACCATTGTTTGAAAAATACACACATTTCTTTATTAAAAAAATCTT TACACATCATTCATCATCTGGAAACTGTAAACTAGAAATGGTATGAAGGAGTGTCCTCAATTTCTATGGAATATGAGTTT TGATCATTTCAGAAGTTGTTATATATTTGACTATTTGTATCTATGGCATTGAAGTCTAAACTCCGAGGTCTTTCACATTT TTGTCGGTCTATTTGTCATCTGCTTCAGATTACAAGGGTTCATTGAGGAATTTTTACCAGTATTTTTCACCAATCACTGT TTCTTTTGCAGCATCTCCTTAGAGTAGTTCCTGTCATTGGCATTCTTCATGACAAGAAAGCATTCAAACCTGTTCTGAGC CCTGCAGAAGTGGAAGCAGTGTTTGATGCACCTTTGGAAATGTTTCTCAAGGTCCATGCTTAGCTTTATTTGTTATCTCG TGTCTTCTTCATTCTTTTCTATATTCATCTATACCTTGTCTGATGCCCATTACTTTAACCAGGATGAAAATCGGAGGCAG GAGGAGAGGGAGTGGATGGGAGAGAAGTATTTGATACATTTCTTCGATTATGAAATCGAGCGTAAAAAATACCTCATATG GGGTTTAACTGCTGGGATCTTGATTAGGGCTGCATCAGTTGTGTACCAACGGCCACCAGCTTTCATAGAGCAGAATCCTA AATACAAGGTTCCACAGGTTGTAACCAAGGATAGTGTAATGCGTTGAGTTAAATATTTTTTGTATTTTTTCCTTAATATA TGTTCTTAATCCTACAATATTAGTCATCACAACTATAAAGTTATAGAATCCCAAGTGTTTATATTTACTGAAAGAAATTA AAAGGGCACTATGCCATCACTTGGAATTCATATTCGTGCTTACCCAATGCTATCATGAAGTTGAGGAGTTGCGGACAGTA AATCACTTCAGAAGGAGTATCAACAATTCTTAGAAACATTTGCTGACTAGTAACTTGTTTTACCTTCTTCTTCAGGTCAG TTTGACCTTGTCATCTTCCAAATTGTATTGCTGCTATGTCTGTATAGTAATAGATGAAATGAAATGGATGAGATGAAATT GAGAAAAACAACCATGCTGTTTTTGGGATCTTTTATAATGGAATGGAATAAGGTTTGACCTTTTTTGTTTAGGAAGTGAA TGAAATGATAGGAGATGATGCAGAATTCATAAGATTATTATTTTACTTATAATCTATGGGTTTGGTGATAATCATGTTGT TTAAGATGTTGATAACTTTTCTTGTTTTTGGAGATTTTATTTTGAATACGATATCTAGTTTAAGAAAATTCATATTTTAT CAAGATCATGTATCTAATTAGGAGTAGTATAGACTTTTGGATAATTATTAACATTATGATTTTTACTTCTTTCGTAGTGG GTGTTTGGCACTGCATTACCACACCATGTTGAGGTCAAAAAACCATGTCAAAGTGGACGCTCCCCCTTATAGCTTGATGT GTTTTGGAGCGTGTGGACAATTCATTTCCAAACACACTCGTAAAGCATTTGAAACTTGAGTGAGTAACTCTAGGTTATAA AGGAAGTGCTTTGCCAAAAGGAGCACTCTTGAATTATTTGCCCAACATCAAATTTGTTACTTAGGAATTTAGGGTTGTCT ATACTATTACTCTATGTATATGGTGCAAATAATAAGTTGATTTCATGTAAACTTATAAATTGGATGGAGGAATAGATGTA TACAATGGAATAAGATGAAATCATCATTAAATTTCATTGTATTTCAGCTTATTTTAAATAGGCTTAATTGCAACTTTGGT CCCTGACATTTGCTAAAGCCACGATTTTAGTCCCTAACCTAATTTAATTACATGAATAGTCCCTGACGTTACATGTCGTT TGCAAAGTTGGCCCGACCGTGTATTTTTTAACAGAAAAAGCTTATGTGGCGTCTGAAAGCTTACATGGCACTGCTACTGG AGAGAGAGACGCATGCCTCATCATCTCTGAAAAGAAAAACAAAAAAAAAAACTTCAAACCCAGAAAGATGATGCTCCCTG TTCATCATCTTCATCTTCTCCTTCAC
CDS sequence (LotjaGi4g1v0065600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACAACCTTATTGAAAAACAGAGCTTTTACAAATGTATCCATGAGAGCAATAACATCCTTAGTACTTCCCAAACCACC TTTCTCCAAATTCATGGATTCTTCTTCCAACGTCATCAATGGACGATCTCAGAGGCTCTTGGCCTTGGCACAACACCTTC GTTTGTACAAGCCACCACCACCTTTCCCTGAAGATATTGTGGAGCAGAGAATCGAAGAAAGTGGTGGCAAGGTTGTTTCC CAAGTGGGTTTTCAAGAATCAGCCACCCCAATTGCACACAACCCAGAAAAATTCAGACCCAATAAAGCTGCTGTGTTGAT CTGCCTCTTTGAAGATGATGCTGGCGATCTGCGAGTTATACTCACTAAGCGCTCTTCCACGCTTTCTACTCACTCGGGTG AAGTGGCATTGCCTGGTGGGAAAGAGGAGGAGGGGGATAAGGATGATGGGGACACTGCAAAAAGGGAGGCAAATGAGGAA ATTGGATTGGACCCAGAACTTGTCAATGTTGTCACTGTTCTTGAACCATTCTTGTCTAAGCATCTCCTTAGAGTAGTTCC TGTCATTGGCATTCTTCATGACAAGAAAGCATTCAAACCTGTTCTGAGCCCTGCAGAAGTGGAAGCAGTGTTTGATGCAC CTTTGGAAATGTTTCTCAAGGATGAAAATCGGAGGCAGGAGGAGAGGGAGTGGATGGGAGAGAAGTATTTGATACATTTC TTCGATTATGAAATCGAGCGTAAAAAATACCTCATATGGGGTTTAACTGCTGGGATCTTGATTAGGGCTGCATCAGTTGT GTACCAACGGCCACCAGCTTTCATAGAGCAGAATCCTAAATACAAGGTTCCACAGGTTGTAACCAAGGATAGTGTAATGC GTTGA
Protein sequence (LotjaGi4g1v0065600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTTLLKNRAFTNVSMRAITSLVLPKPPFSKFMDSSSNVINGRSQRLLALAQHLRLYKPPPPFPEDIVEQRIEESGGKVVS QVGFQESATPIAHNPEKFRPNKAAVLICLFEDDAGDLRVILTKRSSTLSTHSGEVALPGGKEEEGDKDDGDTAKREANEE IGLDPELVNVVTVLEPFLSKHLLRVVPVIGILHDKKAFKPVLSPAEVEAVFDAPLEMFLKDENRRQEEREWMGEKYLIHF FDYEIERKKYLIWGLTAGILIRAASVVYQRPPAFIEQNPKYKVPQVVTKDSVMR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 249 | 249 | - | – | |
| PANTHER | 41 | 287 | 247 | 3.3E-122 | – | |
| PANTHER | 41 | 287 | 247 | 3.3E-122 | – | |
| Gene3D | 77 | 265 | 189 | 6.5E-48 | – | |
| SUPERFAMILY | 98 | 260 | 163 | 5.55E-26 | ||
| ProSiteProfiles | 100 | 256 | 157 | 14.217 | ||
| CDD | 102 | 261 | 160 | 7.67656E-64 | – | |
| Pfam | 102 | 181 | 80 | 3.5E-12 | ||
| MobiDBLite | 131 | 153 | 23 | - | – | |
| MobiDBLite | 137 | 153 | 17 | - | – | |
| Phobius | 250 | 268 | 19 | - | – | |
| Phobius | 269 | 294 | 26 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi4g1v0065600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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