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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0075200 |
| Transcript ID | LotjaGi4g1v0075200.2 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; TAIR: AT4G34030.1 3-methylcrotonyl-CoA carboxylase; Swiss-Prot: sp|Q9LDD8|MCCB_ARATH Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial; TrEMBL-Plants: tr|G7JL66|G7JL66_MEDTR Methylcrotonyl-CoA carboxylase beta chain, putative; Found in the gene: LotjaGi4g1v0075200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:9652497..9656623) extracted from Lotus japonicus Gifu genome v1.2.
GCAAAACCACATAGGATAAACAATGATCGGGTTAATCGGAAGAAAAGCAAGCTGGGCATCCTCCAATTTGGTAGGAAGAA GAGGCTTTTGCTTGGGAATCCTTCCTCATAGCAATGGTGGTGCCACTGCCATGGAAGATTTGCTTTCCCAGCTCCAATCT CACGTCCATAAAGCTCTTGCTGGTGGAGGAGCTGAAGCAGTGAAGAGGAACACAAGTAGGAATAAACTTCTACCGAGAGA AAGAATCGATCGCCTTCTTGATCCTGGTTCTTCCTTCCTCGAGCTTTCACAGGTTTGCATATAAATATATAGGTGCCCAT GTGGTTTAATTTACTTTTTGTGTTCAGGATTGATTTGGGTTTGTGGAAAGTTTGTGACTTTAGTGTGTTTGGTTACACAT TGGGAGCTTCAGAATCAACTCTCATAGAGTGAAATCAATTCTGGATGACAATATTGTGGAAGTGATTTCGTTCAGAATTG ATTTCAGCTCCAAAATAGAAGCTAGAGAGAGTGACTTTTGCATTAGACATAATCAATTCTGAGATTTTACAACTGAATTT TATAAGATTACCCTACAAAAATCATTTTTTTCACAAATGTATTGAAATATAAATCACAACATTTTAGCTCATTTATCCTG TGCAATTTTTCTAGAATCAATTTTGCTGACACTGATCCAAACAAACACACATAATAGCTTCTGCGTTGAACATAGTCAAC TACGAGATTTCATAACCGGATTGCACAACATTAAAATAACCACTTTTTTCAAAGATGTATCCAAACATAAATCATTTCAC TTTTAACTCACTTTACCTATAGTCAAGTTTGCCAAAATCAATTGTGATATCCCTGATTCTAACACGTACTTAGTCATGTG AAGTGACTACTTGCAATGAGTAATGGTTTAAGGGTTGGAAATGGGAATTATGAGAAATGGGTTATGTGTTTTACCAAAGA AAGGTTTTAACTTTAGATTGGTAAAGCTTGCAGGACATGAGTTGTATGAAGAACCCTTGCCTTCTGGTGGAGTTGTCACT GGGATAGGTCCTGTGCATGGGCGACTTTGTATGTTTGTGGCCAATGATCCCACTGTTAAGGGAGGGACCTATTATCCTAT TACTGTTAAGAAGCATCTCAGAGCACAGGAGATTGCTTCTCAGTGCAAATTGCCCTGCGTGTATCTTGTTGACAGTGGAG GTGCTTTCCTTCCCAAGCAGGCTGATGTCTTTCCAGACAGGGAGAACTTCGGTAGAATATTCTATAATCAAGCTCTAATG TCTGCTGAAGGGATTCCGCAGATTGCGTTGGTTTTAGGTTCTTGCACGGCTGGGGGTGCATACATACCTGCTATGGCTGA TGAAAGTGTGATGGTCAAGGGAAATGGCACCATTTTTTTAGCAGGACCTCCTCTTGTTAAGGTCAGCTCCAGCCACTCTG ATATTCCAAAATGCTATTGTGTGTGATAGTCTCTGTCTATTTGTTTGTTCTTCTTTGTTTTTTTACGTTGAGAAGTTCCA CATTGACTAGAGATATGGCCAAAATAGTCCTTATAAAGGGTAGAACAACTTTCACTTCTAAGGTAGCTTTTGGGATAGTG TTAGGCCTGACCCAAATTTTAAGTTGTATATCTTTTAACCATAGTTCACATTAATCAAATGATTTTATAGGCTGCTACTG GAGAAGAAGTCTCTGCAGAGGATTTGGGAGGTGCTACTGTGCACTGCAAGACATCAGGTGTTTCAGACTATTTTGCTCAA GGTATTTTCTCCACCACTTATCTGAATGGATAGAGCATGTGATAGCTGCTGTAGTCTTATTGGTTTCTATTATTGATATT ATACATTTTTTGCTTCTCTGTAGATGAATTTCATGCACTTGCACTTGGGAGGAACATCATTAAGAATTTGCACATGGCTG GGAAAGATGTCTTGGCAAATGGATTGCAAAATTTAAGCTATGAATATAAAGAGCCTCTATATGATGTCAACGAACTTCGT TCTATAGCCCCCACTGATCTTAAGAAGCAGTTTGATGTCCGATCAGTTATTGCTCGTATTGTGGATGGAAGTGAATTTGA TGAATTCAAGAAATTGTATGGCACTGTGAGGGCATATTCACCTTACTGTCTACATGCTTAATCATTATATTTATATCTAT GTGTTGCTATGAAACTTCACTTTTGCTTTTCTCTCTAGGTGCTAGTACCCTTGATGAGTTGTCACACATTTATTGGTTGT TAGTTTTCACAATAAATATTTGGAGTCCACCAAGTATATGCAGCAACCAAGAAATGTTTGACAAGTTCTAAATGTACTGG TAGCCTGGAAAAGAAGTACTTTAATGATTACATGCGTGTATGATATATCCTTATTCAACATATATGCAGACTCTCGTAAC AGGTTTTGCTAGAATTTATGGACAGCCTGTAGGAATTATTGGAAACAATGGGATTTTATTCAACGAATCTGCTCTGAAAG GGGCCCATTTCATTGAAATATGTACTCAACGTAACATTCCCTTGGTCTTCCTTCAGAACATCACTGGATTCATGGTATGA ATTTAAACTTTTTCTTCAGTTACTGTGATTATGATAGTTTGTTTTATTATTCTGAGTAGAATGGTTCCCTTCTCCTTCAG AACATCACTGGGTTCGCAGTATGAATAATATCATTATATTTTAGTGTTTATTAGTTGCGAGATGCTGAATTGTCTAGTAT TGTCCATGATGAGTGATGACATGAATAAATGATCTACATGATTGATGGGGGGAATCAGGAAATAGTAACGAGAGTTTGAG AATCATCATCTGTAATTTGATAAAACCATAATGATGTGTAGATTTAGACAATCCAGCTGGATTATTGACACTGTAAGACA AGTCAATGCACATGAGATCTCAAACTTCAGTTTGATCTATCTCCTTGACCTTTTTTAGCCATGATCCATATTCTTATATT AATTATAGAAGCTGAAGAGATACATTTGCTATTAGCTTGTCTCTCATTTTTTCCAGGTCAAGAATGGTTAAATTATTCAA ATATGACACTGAAAAACTATCCCATTAGTAGTTTGCTGAAGAATGAGACTGTAATTTGTGTCTATTTGGTAGGTGGGCTC AAGATCTGAGGCAAATGGCATAGCAAAATCTGGTGCGAAAATGGTGATGGCAGTTTCTTGCGCAAAGGTTTGTCAATTCT CACCTATTTATAAAACTGTTTACAATTGTGCTTATATGGCGTCTGCACCATGTCTTTTTGGGGGGTGGGGGGTTGGAGCT GTTAAGTCAATTTAAACGAAAGAAAATAGAAGGTATAGTAGAATGAAAGAGGTTGTAATATGTTTATAAAGGTGAATCTC AACTCATGCAAGATATTCTCGAAAATAAATTTTTTTGCTTCAAATAAATATCTGCAGGTACCTAAAATCACCATAATTGT CGGCGGAAGCTTCGGTGCAGGAAACTATGCAATGTGTGGCCGTGCCTACAGTCCCAATTTCATGTTCCTTTGGCCTAATG CCAGAATATCTGTGATGGGTGGTGCTCAGGTAAGTGTATCTCTCTACAAATTATTGCCATTTCTGAACAGCTCTCGACAC CGTCATTGTTCTGAACTTTTTGAGATGCATATCATGTTTTATGCGTGTGTCCTCCATTTGAAATCAAACTTGATTTTTGA ATATTTGATTGATCATTAGTTGAAATTCATCTGGGTTTTGTGGATTTTACATATATTCCTGTGGAATGTGATCATCAGGC TGCTGGGGTACTGTCTCAAATAGAGAAAACCAACAAGAAAAAGCAAGGAATTCAGGTAAAATATGATTGAGGAAATATTG TTTAGTTTACTTGCTTATAACAAATTCATGGCTTTCTCATTTGCCTTTTTTGTGTCTTGATGTGCATTATACTTGTAATG CAGTGGAGCAAGGAAGAAGAAGAAAAGTTCAAAACAAAAGTAGTGGAGGCTTATGAGGTAGAAGGAAGTCCTTATTACTC AACAGCGAGGCTTTGGGATGATGGAATCATAGATCCAGCGGATACAAGAAAAGTGATTGGTCTGAGCATATCTGCTTCCT TGAACCGCGCCATAGAAGATACCAAATTTGGTGTGTTTAGAATGTGA
CDS sequence (LotjaGi4g1v0075200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATCGGGTTAATCGGAAGAAAAGCAAGCTGGGCATCCTCCAATTTGGTAGGAAGAAGAGGCTTTTGCTTGGGAATCCT TCCTCATAGCAATGGTGGTGCCACTGCCATGGAAGATTTGCTTTCCCAGCTCCAATCTCACGTCCATAAAGCTCTTGCTG GTGGAGGAGCTGAAGCAGTGAAGAGGAACACAAGTAGGAATAAACTTCTACCGAGAGAAAGAATCGATCGCCTTCTTGAT CCTGGTTCTTCCTTCCTCGAATTGGTAAAGCTTGCAGGACATGAGTTGTATGAAGAACCCTTGCCTTCTGGTGGAGTTGT CACTGGGATAGGTCCTGTGCATGGGCGACTTTGTATGTTTGTGGCCAATGATCCCACTGTTAAGGGAGGGACCTATTATC CTATTACTGTTAAGAAGCATCTCAGAGCACAGGAGATTGCTTCTCAGTGCAAATTGCCCTGCGTGTATCTTGTTGACAGT GGAGGTGCTTTCCTTCCCAAGCAGGCTGATGTCTTTCCAGACAGGGAGAACTTCGGTAGAATATTCTATAATCAAGCTCT AATGTCTGCTGAAGGGATTCCGCAGATTGCGTTGGTTTTAGGTTCTTGCACGGCTGGGGGTGCATACATACCTGCTATGG CTGATGAAAGTGTGATGGTCAAGGGAAATGGCACCATTTTTTTAGCAGGACCTCCTCTTGTTAAGGCTGCTACTGGAGAA GAAGTCTCTGCAGAGGATTTGGGAGGTGCTACTGTGCACTGCAAGACATCAGGTGTTTCAGACTATTTTGCTCAAGATGA ATTTCATGCACTTGCACTTGGGAGGAACATCATTAAGAATTTGCACATGGCTGGGAAAGATGTCTTGGCAAATGGATTGC AAAATTTAAGCTATGAATATAAAGAGCCTCTATATGATGTCAACGAACTTCGTTCTATAGCCCCCACTGATCTTAAGAAG CAGTTTGATGTCCGATCAGTTATTGCTCGTATTGTGGATGGAAGTGAATTTGATGAATTCAAGAAATTGTATGGCACTAC TCTCGTAACAGGTTTTGCTAGAATTTATGGACAGCCTGTAGGAATTATTGGAAACAATGGGATTTTATTCAACGAATCTG CTCTGAAAGGGGCCCATTTCATTGAAATATGTACTCAACGTAACATTCCCTTGGTCTTCCTTCAGAACATCACTGGATTC ATGGTGGGCTCAAGATCTGAGGCAAATGGCATAGCAAAATCTGGTGCGAAAATGGTGATGGCAGTTTCTTGCGCAAAGGT ACCTAAAATCACCATAATTGTCGGCGGAAGCTTCGGTGCAGGAAACTATGCAATGTGTGGCCGTGCCTACAGTCCCAATT TCATGTTCCTTTGGCCTAATGCCAGAATATCTGTGATGGGTGGTGCTCAGGCTGCTGGGGTACTGTCTCAAATAGAGAAA ACCAACAAGAAAAAGCAAGGAATTCAGTGGAGCAAGGAAGAAGAAGAAAAGTTCAAAACAAAAGTAGTGGAGGCTTATGA GGTAGAAGGAAGTCCTTATTACTCAACAGCGAGGCTTTGGGATGATGGAATCATAGATCCAGCGGATACAAGAAAAGTGA TTGGTCTGAGCATATCTGCTTCCTTGAACCGCGCCATAGAAGATACCAAATTTGGTGTGTTTAGAATGTGA
Protein sequence (LotjaGi4g1v0075200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIGLIGRKASWASSNLVGRRGFCLGILPHSNGGATAMEDLLSQLQSHVHKALAGGGAEAVKRNTSRNKLLPRERIDRLLD PGSSFLELVKLAGHELYEEPLPSGGVVTGIGPVHGRLCMFVANDPTVKGGTYYPITVKKHLRAQEIASQCKLPCVYLVDS GGAFLPKQADVFPDRENFGRIFYNQALMSAEGIPQIALVLGSCTAGGAYIPAMADESVMVKGNGTIFLAGPPLVKAATGE EVSAEDLGGATVHCKTSGVSDYFAQDEFHALALGRNIIKNLHMAGKDVLANGLQNLSYEYKEPLYDVNELRSIAPTDLKK QFDVRSVIARIVDGSEFDEFKKLYGTTLVTGFARIYGQPVGIIGNNGILFNESALKGAHFIEICTQRNIPLVFLQNITGF MVGSRSEANGIAKSGAKMVMAVSCAKVPKITIIVGGSFGAGNYAMCGRAYSPNFMFLWPNARISVMGGAQAAGVLSQIEK TNKKKQGIQWSKEEEEKFKTKVVEAYEVEGSPYYSTARLWDDGIIDPADTRKVIGLSISASLNRAIEDTKFGVFRM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 29 | 287 | 259 | 5.1E-93 | – | |
| PANTHER | 34 | 556 | 523 | 3.6E-289 | – | |
| PANTHER | 34 | 556 | 523 | 3.6E-289 | – | |
| ProSiteProfiles | 37 | 293 | 257 | 55.194 | ||
| SUPERFAMILY | 38 | 279 | 242 | 5.27E-68 | ||
| Pfam | 63 | 547 | 485 | 1.8E-159 | ||
| Gene3D | 295 | 556 | 262 | 2.3E-103 | – | |
| SUPERFAMILY | 298 | 556 | 259 | 1.29E-82 | ||
| ProSiteProfiles | 302 | 548 | 247 | 51.271 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ligase activity | Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate. |
Expression pattern of LotjaGi4g1v0075200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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