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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0089500 |
| Transcript ID | LotjaGi4g1v0089500.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT1G14000.1 VH1-interacting kinase; Swiss-Prot: sp|Q8RWL6|STY17_ARATH Serine/threonine-protein kinase STY17; TrEMBL-Plants: tr|K7K1X9|K7K1X9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0089500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:11860438..11867426) extracted from Lotus japonicus Gifu genome v1.2.
ACCGATATGAGTTCCGGCAGCGGCGGCGGCGGCAGCAGTAGCAACCGTGAGAATGAGAAGGCGAGGGTGAGCCGCACCTC TCTGATTCTCTGGCACGCCCACCAAAACGACGCCGCGGCGGTGCGGAAGCTTCTTCAAGAAGATCCCTCCCTTGTCAAAG CCAGAGACTACGACAACCGCACCTCGCTCCACGTCGCTTCCCTCCATGGCTGGATCGACGTCGCCAAATGCTTGATCGAG TTCGGCGCCGACGTCAACGCTCAAGATCGTTGGAAAAACACTGTAATTTCCAATTTCCAGTTTCCAATTTTCCATTTCTA AATTCTGATTCCAATTCTCTGTGATTCGTAGTGAAATTGAACTGTTTAGGGTTTGGTGTTTTTGTCGATAGCCTCTTGCT GATGCTGAAGGAGCTAAAAGGATTGATATGATCGAGCTTCTGAAATCACATGGAGGCTTGTCTTATGGCCAAACCGGGAG CCATTTTGAACCCAAGCCTGTTCCGCCTCCGTTGCCTAACAAGTGTGATTGGGAAATTGAACCTTCCGAGCTAGACTTTT CCAGTTCCGTGCGTATCGGGAAGGTGCCTTTTCTTCAATTCTCTAGCATTGATTTGGATAGAAAATTTGCTGCTATTTCT TACATGGATTAGTTGATAATAGTAAATTTGAGCAATCAATGATATATGTGATAACTTAAGGTGGAAGGAAGTATAGAAGA TTTCAATATGATTATAACTGCCCACCGAGGGTCAACTTGGAATCCTTGCTTTTTCTATATCTATATGCTTCCTGGATACA TGCAAGAGAAGGTATCGCGGTGGTGGAGAGAATGAATAAATGAAGTGTTAGAGATATAGAGAAAAGACAAAGACATGGTT CTCTTAATTAGAAGTGAAATATAGTACATGGAATTCATTTTCAGCAAGAAATACGCGTTGCTAATCCTAGCTTAGAGGTA AAAAATGGAAAACATGCAATACCATAAGTCTCACTTTTAAACTACCTTGACTCCATGACAAAATTACAATAAGATAAATG GGGATGTTAATCATAGAATTCAAGTAGGGTGGATGGGATAGAGGCATGTTTTCAGTGTGATCTACAGTGGAAAACTACCA TTCAAGTTGAAATGAAACAAAAGGAAAAATTTTCCATGCAGCTATTAGACTTGCAATGTTCTATGGAATTGAAAAAGTGC TATATCGACGGTTGAAATTTTTAGGAACACCATAGTTTATTAAACATGTGCAGATATATTATCATATTCTCGATAAATGG TTGTGATGACTTACTTCACTCTAGAAAGTAACTTCCACTTTAGAGGAGTCAAATCCATGGAAGTGAATAGTTAAGAGCCA ATAAGAACGTATGTTCGAAGTTGCAAAGATGGAGGAGAATGTTACTATGGATGAGTGGTTACATAAGACAAGTTTGGAAT AACAATACAATTATTAGAGAGAAAATCAAGGTGGCACCAATTATTGTAAAAATGACAGTCTCATCTTTGGTGGTTGGAGC ATGTGAGGGGATGACTCGTAGAAGTACTGGTTAGAAGGGTTGATAAGATGAAGGATAGCTTGATAGAGATAGAGGAAGAC AAGAAAAAAGAAGACAATAGGTCAAGCCATTAAGAGAAATTTAGGGTTAAATAGTCTATCTCTAAATTTAATATATGATG ATATACCATAATGGCGTTGTCAAGTCACATAGTCGACCAACCCATTTGGTGGGAAGAGACTTGTGGTTGCTGTTGTTTTA TGCTTCAGGACTAAGAATTGCAATACTTGATAATGCTTCGTGTAAGGTCAGGTTGTATGAACTCAATTTAATGTGTGTTT GTCTTTCTTTTAATATTTTATTATTGCATGATCATCGAAGACAGTCGTCACCCGTCAATTTTAAATTTTATTTATGGCTG AGTGAGTAAAATGCAGTTTTTTTTACTAGCTTAGTTGTTTTCTTCTATGCATGTAGTGTTTCTTGAATTCTTGTTACTAG TTTTGTTTATTTTTTCTTTCTTATTCTTCCTTTTCCAATTGCCATTACTTTTGTTCATATTTCACTACTTTTTTTATTGT ATGTGGTCAGTGTTTCTTGCTGTTAATTGTGTGCTTTGCTTTGCTAGGTGTATCATATCACTTTTACTTTGCATATAAGC TGTTGATGTATGTTTCATGCAGGGATCTTTTGGTGAGATTTTGAAAGCCCATTGGCGTGGAACTCCAGTTGCTGTTAAAC GCATTCTTCCCTCTCTTTCAGAAGATAGATTGGTGATGTAAGATTCTTTCATTCATCTCTGGTATTTGTATTCTGTTTGG TTGCTACTAGTTTGTGATTCCTTGTGATTTAAATGTCTTCTGGTAGCGTATGGTTGATTAGTCTGTTAAAACTAATGTCT AATGACTTGCTTTTACCTGTCCTCTGTCAAATCTTACATATTGAAGGTATTTTTTTTCATGTTTAACCTACTTCCTCTGT AGTGCAAAGGGATTTATTCTAAACCCATTGGATATTTGGATGTGTCATTGTCTCTGTTTATTGTGATTAAAATGAATGAT AAAAACTAAACCTCCCCCAGGGATTTTCCGCTGTCTCATGTCAATGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT CTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACTGTGTGCTAATCTTGTATGTTAATTTTTTAT GCAGTCAGGACTTTAGGCATGAGGTCAATTTGTTAGTGAAGCTTCGACACCCCAACATAGTTCAATTTCTTGGAGCTGTT ACTGAAAGGAAGCCCCTTATGTTAATTACTGAGTATCTAAGAGGGGTATGTGAATGAAATATAATTCATTCTAATTGAAC ACGGTACACCTTATTTTTTATAGAGTGAACTTATGCAAACTTTTACTTTAAAATTGATCTTCTGTTTAACTCATTTGTAG GGTGATCTTCATCAGTACCTCAAAGAAAAAGGTTCACTTAGTCCCTCCACTGCTATCAACTTTTCCATGGATATTGTTAG GTATGGTTTCTTACCTTCTTTTCCAATTCTATCTGTATCTTATATAAAGAAATTATTAAGAGCAAAGGAGAATTACATGA AAGGAGTATAGGCAGAAGTTATCTTATAAAAACTAAGAACTATTAAGAGCCAAAGAGCTCTCCAATCTAGCTGTGCCTGT AAATCTGTTGTTACATTAATACCCGTCCTTTGCCAGTCCCTGCGGCAGTCAAACCTCAGTTAGTTTCTTGATAACCTTTA AGATTGAACTCCAGCCACAGAGTCCACAGCAATTCCGGAAGGAAAATGTTTTTCCAAAGAAGCTTGCATTTTCCCCATCT TTTAATGCTGCTTAAGTGGAGTGACTAAAATTTTCCGAAAAGCCATTTTCAAAGCTACCAAGCTCTTGGGAGTGAGAATA CTATAAAAGAGGAACTTATCCAACCTTTCACGTATGCTGTTCACTGTGCACTGCTATTATTGAAAGTCTGGTCTATACCT TGATTTCTAACTGTGAGCCAAAATTACCTCCAAGACTTTGGGATATGCTGGAAAACAAACATTAAAATACTAGTTCTGGA CAGAATGGCATGTCAGTAACCCTGTTAAGATACAGATAATAACTTTGTTTCTTATTACTATTTTTAATCATAACTTTTGT ATTCATACTAGATCTTACTAGACAAAATTTTATCACCCGAAGGTGTTGACTTCTCCTTTACAAACTTGCAAGTGAATTTC CCAGTCAAATGAACTCATATTTGTGTACAGAAAAAGCTAGCTTGACAAAAGCAGTGAATCAAGTAACCGAGCAATATCGT GCAGAACTGACAGATATTTGTTTATTCATTAACTGAATGATTGGAATCTTTATGATTACTGATTCCTCAGTTAAGGAGAC TGAGTAGGTCTTTTTGAAGAGGTGGGGTAGGAGGATGCCCTTAATAATATGGCTATCAATTCTGAGCTAGAAGCATTTGT AGAACTATAGGTATTTGTAAGTTGTAACAGCTTTACATAACTGTACCATTATGCTAATCTATATGTTGTGAATATTCCCT GCAGAGGAATGGCCTATCTTCACAATGAACCAAATGTTATAATTCATAGAGACTTAAAGCCAAGGTAAGTTGTTTATTAC ACACCTATGTATTAATTTATGATGTTATTGTCATAGACTTCATGTCATGATGTATTACTAAACAAACAAATTGAAGCAAA TTTTACCCTTATCCTAGATTGACTAGTTTTTATATCATCAAGAACATGAAGCAGCTGGAAGTCAGAAGCCTTTGAATTAT ATGTTAAATTTTATTTTCTGAAATTTCAGGAATGTTCTTTTAGTTAATTCTAGTGCCGACCATTTAAAAGTTGGAGATTT CGGATTGAGTAAGCTTATCACCGTTCAGAATTCTCATGATGTATACAAGATGACTGGTGAAACTGGGAGCTGTGAGTATT CTTAGAAGTTCTTTTAAATCATTATTTGTCATTCTTGTGCAAAACTTACTTTAATTTCCTTCTTGGGGATAAAAAAGATC GCTATATGGCTCCTGAAGTTTTCAAACATCGGAAATATGATAAGAAGGTTGACGTCTACTCCTTTGCAATGATTTTGTAT GAGGTAATACTGCTTGCTTAGGTATGGAAGTTTTACGTATTACAATCTTAAGCTACTTCTAAATCATGATATCATTTTAT GCAGATGCTTGAAGGTGAACCTCCTTTTGCAAGTTATGAACCTTACGATGGAGCAAAACATGCTGCTGAAGGACATAGGC CTAATTTTCGGGCAAAGGGTTATACCCCCGATTTGCAGGAGTAAGCCATTATTATAAATTTCTTTTATCCAATTTTGCAG CACTCTATATATAGGAGTTAGTTCATGATATGGTATCAAACTCTCAATGACCAAGTGGTCAAGACTCAAGAGTTTGTGCT ATTATCATTCTTCTAAGTGGGTTTATTTAATGTTCACACTTCAAGCCTAGAGCTTCACCTAACGGACCATGTTTAGTGGT ATAAATCATTTCTAGGCTTGCACCTAATAGATGAAGCTATTAAGAGAGTTGGTAGGTCCTTTACAGTATTAAATTAAAAA TACTCAAATGTAAGCTACATGTTTACTTGATTAAGTTCAAGTGTATAATGTGGTTTAATTTCACTTATAGAGTAGCATAT TAAAAGGAATTTTTGATGTCCTAAAAATGGTACTGTTTGAGGTCACAAGGGCTTCAGTAGACAGATGTGCTCACCAAGGG ACTTCCCTTAGAGCGATTCCGAGATCTTACTTGCAAGCTGGGAGCGATAGTATAAAACCATTCATGTTTCTTCATCCAAC AACTTAAGTTTTTTGGATAGTTGGTTCATGACATGGTAGTTAGAGCCTCCATGACTAAATTGTGTAGAGTTCGATCTTTG TTCCCCACATTGTTCTAATAAAAAATTGAATTTCGGCACAAGGTAGGTAAGCTTGTGCATTCTCCACGCTTCAAGCCAAA TGGGCTCTAGTGAGGGGACGTGTTAGAAATATAATATAAAATCATTCATGTGTCTTTATCCAACCGTTTAAGCTTCTGGG AAATGAAAAATCATTCATGTGTCTTTATCCAACCGTTTAAGCTTCTGGGAAATGAAAAATCATTCATGTGTCCACACGTA TCATTCATTTATACCCTTCCTTTTGTGTCTAACTTGCAAGGCTTTTCCTATTGCTTCCTATTGAATGGGAAGTATTTCAT TATTGAGCTTGAAGAGCATTTACAAGTTCTGTCAAGCTTATCTTAGAATGAGTTTTTGATTCTTCATGTGAAGAAATCTT AGATTCAAACCCTTGAGGTTAAACCACCAAGGTTTTGTTTACAAATATGCTGTTTGGAAGTTCTTACATCAGTCTGATTT GATTCACAACTCATAATCTTGGCCATGAATTCCTATGTGGTTTCAGCCCCATTCACCTGTAAGGCTTCAATCTCTTTTGA CATAGATAACCTGCATTATATGTTTGGTTCTCTCATATCCAAGTAACTCCTCAGGCTTCTTATAGATTTTGAATCAAGGG TATCCCCAAGCTGACAATGAAGCCTTTTTCCTCTCCCAGTGAAGCCTTTTTCACACACATGGCAAAGGATCGAATCTTTG TCTGCATGTTTAAAGAATCTAACTATCTACTAATTGTGCTGAGCTTTGTTGGTTTTTCATTTTTGCTTGTGATATCTCAT CTAAGAAGCAAGGGGATTTACTTTTAAAGATGGTGGTTTAGTGCCAGCTTCCATCACATCCTAAAGATTATAGGCAACTG AGTTCTTCACAACCTAAATTTCTTAGTTCTTTCTTGTTAATACATGAGGTGCTACTAGTGAGATAGTTTGAAGCCATCAA CAAAACATTGGATTTTCTAGTGGATATTCTGGTTTTCTCTTTTTGTTCTCATAAGTCCCTCATGAACACACAAGGTCTTG GGTACTAACTGTTAGCTCTCAAGACATTTGAGAAATATGAAAATTTGTATTCAACACAGTAGCTTCAGTTTCTGATGCCA TATAACTTCAAAAAACTGTATTAGTGTTCTAACAACTAATGCTCACTCATCCTAATGAAACTCCAACAGATATGAATAAG AAACATCCTACAACTAAATCAAGCACGATATAAAACTATGCTTAAAATTACTGATTTTTATAAAAGTTGTATCATCACAT CTAATTGTAGGTTCTAGAATGCTTTGTAAATTAGGTAATCCGAAGTTATATCTAATAAATATTTATTTCATTTGTATCAA ATGTTCATTAGAGAAGTTGACTTTAATGTAATCTTATTGACTTTGGCCGTGCATGTTTACAGATTAACACAAGAGTGTTG GGCTGCTGACATGAATAGAAGACCTTCTTTCATTGACATCCTTAAACGGCTTGAAAAGATCAAAGATAATTTACCTTCAG ATCATCACTGGCACTTGTTCGCATCTTAA
CDS sequence (LotjaGi4g1v0089500.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTTCCGGCAGCGGCGGCGGCGGCAGCAGTAGCAACCGTGAGAATGAGAAGGCGAGGGTGAGCCGCACCTCTCTGAT TCTCTGGCACGCCCACCAAAACGACGCCGCGGCGGTGCGGAAGCTTCTTCAAGAAGATCCCTCCCTTGTCAAAGCCAGAG ACTACGACAACCGCACCTCGCTCCACGTCGCTTCCCTCCATGGCTGGATCGACGTCGCCAAATGCTTGATCGAGTTCGGC GCCGACGTCAACGCTCAAGATCGTTGGAAAAACACTCCTCTTGCTGATGCTGAAGGAGCTAAAAGGATTGATATGATCGA GCTTCTGAAATCACATGGAGGCTTGTCTTATGGCCAAACCGGGAGCCATTTTGAACCCAAGCCTGTTCCGCCTCCGTTGC CTAACAAGTGTGATTGGGAAATTGAACCTTCCGAGCTAGACTTTTCCAGTTCCGTGCGTATCGGGAAGGGATCTTTTGGT GAGATTTTGAAAGCCCATTGGCGTGGAACTCCAGTTGCTGTTAAACGCATTCTTCCCTCTCTTTCAGAAGATAGATTGGT GATAGGAATGGCCTATCTTCACAATGAACCAAATGTTATAATTCATAGAGACTTAAAGCCAAGGAATGTTCTTTTAGTTA ATTCTAGTGCCGACCATTTAAAAGTTGGAGATTTCGGATTGAGTAAGCTTATCACCGTTCAGAATTCTCATGATGTATAC AAGATGACTGGTGAAACTGGGAGCTATCGCTATATGGCTCCTGAAGTTTTCAAACATCGGAAATATGATAAGAAGGTTGA CGTCTACTCCTTTGCAATGATTTTGTATGAGATGCTTGAAGGTGAACCTCCTTTTGCAAGTTATGAACCTTACGATGGAG CAAAACATGCTGCTGAAGGACATAGGCCTAATTTTCGGGCAAAGGGTTATACCCCCGATTTGCAGGAATTAACACAAGAG TGTTGGGCTGCTGACATGAATAGAAGACCTTCTTTCATTGACATCCTTAAACGGCTTGAAAAGATCAAAGATAATTTACC TTCAGATCATCACTGGCACTTGTTCGCATCTTAA
Protein sequence (LotjaGi4g1v0089500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSGSGGGGSSSNRENEKARVSRTSLILWHAHQNDAAAVRKLLQEDPSLVKARDYDNRTSLHVASLHGWIDVAKCLIEFG ADVNAQDRWKNTPLADAEGAKRIDMIELLKSHGGLSYGQTGSHFEPKPVPPPLPNKCDWEIEPSELDFSSSVRIGKGSFG EILKAHWRGTPVAVKRILPSLSEDRLVIGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLITVQNSHDVY KMTGETGSYRYMAPEVFKHRKYDKKVDVYSFAMILYEMLEGEPPFASYEPYDGAKHAAEGHRPNFRAKGYTPDLQELTQE CWAADMNRRPSFIDILKRLEKIKDNLPSDHHWHLFAS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 353 | 353 | 28.315 | ||
| PIRSF | 2 | 188 | 187 | 2.7E-53 | – | |
| Gene3D | 7 | 123 | 117 | 5.7E-21 | ||
| PANTHER | 7 | 188 | 182 | 4.0E-195 | – | |
| PANTHER | 7 | 188 | 182 | 4.0E-195 | – | |
| ProSiteProfiles | 22 | 113 | 92 | 16.653 | ||
| Pfam | 23 | 87 | 65 | 1.4E-6 | ||
| SUPERFAMILY | 24 | 113 | 90 | 3.11E-18 | ||
| ProSiteProfiles | 56 | 88 | 33 | 13.25 | ||
| SMART | 56 | 85 | 30 | 0.0014 | ||
| Gene3D | 133 | 185 | 53 | 3.9E-5 | – | |
| SUPERFAMILY | 140 | 352 | 213 | 3.06E-50 | ||
| SMART | 148 | 343 | 196 | 2.4E-13 | ||
| ProSitePatterns | 154 | 175 | 22 | - | ||
| PIRSF | 185 | 357 | 173 | 3.7E-68 | – | |
| Gene3D | 186 | 352 | 167 | 9.1E-47 | – | |
| Pfam | 189 | 339 | 151 | 3.7E-33 | ||
| PANTHER | 189 | 354 | 166 | 4.0E-195 | – | |
| PANTHER | 189 | 354 | 166 | 4.0E-195 | – | |
| ProSitePatterns | 200 | 212 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi4g1v0089500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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