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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0109000 |
| Transcript ID | LotjaGi4g1v0109000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | NBS-LRR disease resistance protein; TAIR: AT5G66900.1 Disease resistance protein (CC-NBS-LRR class) family; Swiss-Prot: sp|Q9FKZ1|DRL42_ARATH Probable disease resistance protein At5g66900; TrEMBL-Plants: tr|W0M058|W0M058_CICAR NBS-LRR protein; Found in the gene: LotjaGi4g1v0109000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:15445577..15451943) extracted from Lotus japonicus Gifu genome v1.2.
GGGGGCAATTTTAGAGTGTGTGTATAAAATAACACTAAATATCATAATATTTATTACTATTACTAGTGATTTTTTCACAA TCACGTGGGGGAATTTGCCCCCACTCTCCCCTAAGTGGATTCGTGCCTGTCTGCAACAAACTCGATGCAGATGCTGAGAA ATAGAACGACGTCGCTCAGGTAGAGGAGAAGCATTTGGTGGAGGAAGGAGGAGAAAAGAGGCAGAAGAGAAGCATTTGGT TTGGGTGGGTCGGTGGAAAAATCGAATTTGAAATCATATTGGTCACAGCTCTTTAGATGGATTCTAAACTACCAATTGAC ATTTTAGAAAATGTTATGCAACTGGCAACTGAACGCTGCAAAGCAATAGCAAACTGCATACGAGAGATTTTACTAAAGAA CACAAAGCAAGGTGTAATTTTATAGTAGAAAATTGCAGGTTCGTTCTCTCTATAGTTGTGCGATTTTCTTTTTTGGTTCA AGATTCAATTGTATCAACTGTGAAGCGGGAAATATAGAGGTGAATGTGCTTAGAAAGCACTGTCACCGAGTTTTCGTTTA GCCTTTGAACCCTCGTCAGTGTTTTGTTTTGTTCTAGCAGACGCATAAATTGAAAATTTACCCAATTTCAGGTCCTATAT CGTTGGGGTTGAACTTATTATCATAATTTCAGTGCAATGTTTCATTTCTCTGTTGTAAAAAAAAAGGGAAAAACATTTGC CATTAAATTTCCCGATCTTTCAATATTTCTTTCTTGTTTTGTTGAGAATGAACGTATTGGTTAATTGGGTTTTCCCCCAG ATCGAGTCCTCTGTTATGGAGAACGTGTGAGTCCCTGATCCAAATCGACTCCCAGATTTAAATATGGTCTCCGCCATAAA TTGTGTAATCTCAGCCTTAAAAATTAAAAACCCAGAAACAGGAACAAGGGAGAAGAAATATTTAATCTTCTTTAGTTGAA ACCTAGAAAGGACCTATTAACTCTGGAGATTCATAATTCTAAGCTTTGGAACTCAAGTGGAGCTGCAATGAACTGTAGTC GGAGGGTGGGTTGGTGGCGCAGTGACTGTCTAGAGGTTGAAGATTGTGGGTTTGAAGAGCTACAGAGAGGAGGAGAGGCA GAGTGGTAGTGGTACCAGGTGAGAGAGATCCAAAAGAAGGAAGAAGGGGTAACTTAAAAAATACCTTTGATACAAAGTCT AATATACCCTTAGTGCACCGGTGGACCAAAAAAAAAGTTATCACCCTAGTGGGCACCTAGATTTAATACACACCTCTTGC TATATATAAAATATTTTAATATTTTATATATCGAGTGGGTATCCATGTTACATGGGTATGAATACATCAATATCTGTAGC CATCCCGTTAATAAATAGATAGTGGAAATATTACTAAATAAATTTGTAGATACCCGTGGGTGCGGGTAATTTTACCCATA GCGGGTTTTTATCTACGGGTGTGAGTGGTTTTGACATCCCTAAATGTTACAGATGATAAAAGGAAAGATATAAATGAAAA TAGATCGACATGATGTGTTTAAAAAATAAGGTGTATTTTTTTTTGCCTTTTTTTTATAGGTAAAAAAAAATGTGGTGTGT ATGTATCATTTTTAAAAAACAGACAGCTCACTTTTCTCACTATTTTTTAATATATAATTAATTTTTCGTGACTTTGGAAC ATGCTTTTGACTGTTTCCTTAAGCGTGTTGCCGTGTAGTACGAATAAAGATAAGACTTTAGAGCAAAGAGGGAGGTAGTT TCCTTTTCCATATAAGATACTTGTTTCACGATTCCAAAGTTTCAAATCTCCAATATTTCGATTTCAATTTGCAAAAAAAT AAAAATTGCAGGTAAGAAGATAAGGAGAAATTGAAGTATCTGTGTTCATTTCAAAGCTAGTAAGTAAAATAACTCTTACA TTTTTCAATTTTTACTCCTCAACATTTCAATTTCAGAAGAAGCACAAACCAACTTTGAGTTTCTCTGCTTTACATAACAT GTTCTTTGTTTGAGTATGTTGAAAATTATTATTTGTTCTATTTTCTGTTTACTAATTGTTGCCTGAGTTGTTTGTCTGAA GGAGGGGAAAAGTCGATCCAGATCCAGGTGCTTCCGCTGATTTGTCATCTTTCCCCAACATAGTAGAAGAAGAAGCTGAA TTCAATGGCAGATGCAACACAGCTTGTTGCTCTTGCTCCTCTGGCTAGATTTCAAGAGATCTTGAAGAAGATCTCTCAAA TGGTGGAGAAATCTCGAAAGAGTGGAATCGCTCAGAGAATTCTAAGGTCAACGCTCATAGAATTTAACCATGTTGTGCTG GAAATCAAGCGTTACAACGAGCACTTGGCTCAGCCTAGAGAAGAAATCAAAACCCTCATCAGAGAAAAAGATGCAGGGGA AGAAGGAGAAAAAGGGGACAAGTGTGTCAATTCCTGTCTTCAGGTTTTCACTGACAGAGTTTGGCATGGTAAGGATGATT CTGATTCGGTTGATGCTGATGAGAAGCAAGCTCTCACAGCGAAAGATGTTAAGGAAACGCTTTACAAGGTGAGGGAGATT CTTGAGCTTCTTACCCAAGAGGATGGAGGAGCTGGAACATCAAAAATCAAGGCTCCTTTTGATGTTCCTGTGAAACCAGA TTTCACTGTTGGGTTGGATGTGCCCTTGAGCAAGCTGAAGATGGAGCTTCTCAAGGACGGTGTCTCGGTCGTCGCTGTGA CCGGTTTAGGTGGGTTGGGGAAAACAACTTTGGCTGCAATGGTTTGTTGGGATAAACAAATTAAGGGTAAGCATCCATTT GATTTTTTTATGTCTGATAAATGGATATGAGCATATGAGCTACTAATTATGCATTTTTAACACAATTTGTGAAAAATTAT GCATTTTTTAACATAATTTATGCATTTGTAACATAATTTGTGAACCATTCACACCGCAACACATATCGCAACAACTGTAA TATCTGTTATCGCAAAAAACAAAACGGGACCGCTACCGCAATTTAAAACCTTGACTATTACTAAAAATATTAACAGAAAG AAGTGGAAAAGAAAATTATTGGAAATATGCAAACATATAAGATTTCAGTTGCTCTGGGCTAATATATCTTTTTGGTTTCT TTACAGGTAAGTTCAGGGAAAATATTTTATTTGTAACATTCTCGAAAACGCCCAACGTGAAGAATATTGTAGAGAGACTA TTTGAACACTTTGGATATGAAGTGCCTGAGTTTCAAAGCAATGACGATGCAGTTTATCAATTGGGGCCTTTATTTAAGAA GTGTGAAGGAAATCCGTTATTGTTGGTTTTGGATGATGTCTGGCCTGGTTCAGAAGACCTTGTTGAGAAATTCAAAGTCC AGATATCAGATTATAAAATTTTAGTGACTTCAAGGATTACGTTTCCTAGATTTGGCACCCCATGTGTTCTAAAGCCTCTT GCCCATGAAGATGCAATAACCCTTTTCCGTCACTATGCTCTCTTGAAAGATAGTAGTTCAAATATTCCTGACGATAATCT TGTCCAAAAGGTGCTAGTTCGTGCTTCCTTACATATTAGAGTTATCTATACTTGTTATTTGCTGTCTTAAGTAATTCATT TGAAGTTCACATCACAAAATCATTCAAGATCATTTGGAACTTCTTGTTTTGTTTTTTAAAACAACTTATGACTGAATGAA CAAAAATAAAAAGAATGTAGAAACCATGATTTGACCCTTCAAAGGGATTATATGATTGCTTACTTAACACTTGGGCTCCT AAATCATAATCCTCTGATTACTAAACTATATTTCCTTTTGCTGAATTGAGGTGGTGGGAAGTTGCAAAGGTTTACCACTT GCTATTAAAGTGATTGGTACATCACTCAGGAGTAGGCCTTATGAGTTGTGGCAGAAAATAGTGAAGGAACTGTCACAAGG TCATTCTGTACTTGATTCTCATACTGAGTTACTTACTCGCCTCCAAAAGATCTTAGATGTTTTGGAAGATAATCCTGTCA TCAAGGAGTGCTTCATGGACTTAGCATTATTTCCTGAAGACCAAAGAATTCCTGCTACTGCTCTCATTGATATCTGGGCA GCATTGTATGAACTAGATGAACTAGAAGTGATGGACATCATCAAAAAATTGGACTCCATGAATCTGGCTAATTTCTTTGT TGCAAGGTATAATTATTATTAATATTTTCTTCTATGCCACTTAATTGTAATATATGTAACATGAATTGTAACAAAAGTTC AATAGCTTGTGTGCCTAGTCTGAGAAGCATTTGATTCTTTAGATTATGAGAACAGAAGTTGAAATTCATAACTAAACTAT CTGATAGAGAGCATGCATTTGAGAGAATTTTTATCATTTGGAAATTAACTTCTGCTCATTTACCAGGAAAAATACAAGTG ACACTGATGATTACTACTACAGTAACCACTTCATCGTCCTTCATGATCTTCTAAGAGAGCTAGGAATTTATCAAAGCATA CAGGAACCAGTTGGAAAGAGAAAAAGACTGAACATTGACACGAACGAAGATAAACTTGAATGGTTGCTTCAGGAGAAGCA GCAAGGCATAATGTCCCGCACGTTGTCAAAAATTCGTAGATTGTGTCTTAAACAGAAGCCTCAACTGGTCCTTGCCCGCA CATTGTCTATATCAACTGGTACTTATACCTTTCTCTAAACTATGTTCGCTTACTTACAAAGTCAAAATGCTATTAAGACA GTTTCAATAATCTTTCATTCATTCCGCTTGCTTAACTGATCACAAATGTGCTACGTTTGCAGATGAAACTTGCACTCCAG ATTTGTCCCTAATTCAACCAGCTGAAGCTGAGGTTCTGATTTTAAATCTTCGAACTAAGAAGTACTCCCTTCCAGAGATC TTGGAGGAAATGAATAAACTTAAAGCTTTGATAGTCACAAATTACGGTTTCCATCCTTCTGAACTAAACAATTTTGAGCT ACTAGACTCTTTATCCAACCTGAAGAGAATCAGACTAGAACAGATTTCTGTTCCTTCCTTTGGCACATTAAAGAATCTTA AAAAGTTATCCCTCTGCATGTGCAATATCAGGCTGGCCTTTGAAAAGGGTAGCATCCTAATTTCAGATTCATTTCCAAAT CTTGAAGATCTGAACATTGACTATTGCAAGGATATGGTAGGATTGCCTAATGGGGTCTGTGATATTATCTCACTAAAGAA GCTCGGTGTTACTAATTGCCACAAGCTTTCTGGGCTGCCCCAAGAAATTGGAAAGTTGGAGAATTTGGAACTCCTGAGGC TGAGTTCCTGTACTGATTTGAAAGGATTACCAGATTCTATTGGAAGGCTTTCAAAACTAAGACTTCTTGACATATCAAAC TGCATAAGCCTTCCAAGTTTGCCAGAGGAAATTGGTAACCTGTGTAATCTAAAAAGTCTCTATATGACAAGTTGTGCAGG GTGTGAATTGCCATCCTCAATTGTCAATCTTCAGAATCTAACGGTGGTTTGTGATGAAGAGACGGCTGCTTCATGGGAAG CTTTTGAATATGTGATTCCCAATCTGAAGATAGAGGTTCCTCAGGTTGATGTTAACTTGAATTGGCTTCATTCAACCAGC GTCTAAGACCTCTTTCTTTAAATTGGTTTTGGATCAGTGGTCATGTGTGATATTTCTTTTTAATTGAAGGAAATAATCTA GTTTAAAAACTTGAATAATAATCCTCCTCATGTTGTTTATAGAATGACATGTTTCTTTAAGTTGCTGAATAATCTAGTTT AAAAGACTTGAATAATAATCCTCCTCATGTTGTTTATAGAATAACATGTTTCTTGTAAGTAGCTGTAGTATTTCTTGTAA ATACTGTTACTTGAAAGAGGTAGGAGATTTCATGTATGTTTTTTTTTATGCTTGATTTCAAGTATGTTTGGTGTAATGTT ATGTGTAGAGACATACTTTGTAGTGTGATGTAATAAAATAAACTATTGCATTGTTTTACTTTTTTTTGAAGTTTATTATT GTTAAATATGTTTTTATCCTTCTCATATAGTCATATATACATATTTTCCCTATATTAAGTCAAAATCCCAATCAATTATA ATATTAATTATTTTTATAATAATTATTCAATCAAAAGACATTAATTACTATTTTTTAAAATAATTATTCAATTAATTAGG TATTTTTGCAGGCTTGATGCCAGCAGCGAGAGAAAGATAAAAAATAGAGTTTAATTTTGATGCACCGACGGTGTAAAGTT TTTTTACACTGTCAACCAATTAGATTTTAAAGATGTGAGAAAATCTCTTTTTTCATTTAATTTCATTAATTGATGTGGCA TATCTTTGAAATCTGATTGGTTGACGGTGTAAAAAAACTTTAAACCG
CDS sequence (LotjaGi4g1v0109000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGATGCAACACAGCTTGTTGCTCTTGCTCCTCTGGCTAGATTTCAAGAGATCTTGAAGAAGATCTCTCAAATGGT GGAGAAATCTCGAAAGAGTGGAATCGCTCAGAGAATTCTAAGGTCAACGCTCATAGAATTTAACCATGTTGTGCTGGAAA TCAAGCGTTACAACGAGCACTTGGCTCAGCCTAGAGAAGAAATCAAAACCCTCATCAGAGAAAAAGATGCAGGGGAAGAA GGAGAAAAAGGGGACAAGTGTGTCAATTCCTGTCTTCAGGTTTTCACTGACAGAGTTTGGCATGGTAAGGATGATTCTGA TTCGGTTGATGCTGATGAGAAGCAAGCTCTCACAGCGAAAGATGTTAAGGAAACGCTTTACAAGGTGAGGGAGATTCTTG AGCTTCTTACCCAAGAGGATGGAGGAGCTGGAACATCAAAAATCAAGGCTCCTTTTGATGTTCCTGTGAAACCAGATTTC ACTGTTGGGTTGGATGTGCCCTTGAGCAAGCTGAAGATGGAGCTTCTCAAGGACGGTGTCTCGGTCGTCGCTGTGACCGG TTTAGGTGGGTTGGGGAAAACAACTTTGGCTGCAATGGTTTGTTGGGATAAACAAATTAAGGGTAAGTTCAGGGAAAATA TTTTATTTGTAACATTCTCGAAAACGCCCAACGTGAAGAATATTGTAGAGAGACTATTTGAACACTTTGGATATGAAGTG CCTGAGTTTCAAAGCAATGACGATGCAGTTTATCAATTGGGGCCTTTATTTAAGAAGTGTGAAGGAAATCCGTTATTGTT GGTTTTGGATGATGTCTGGCCTGGTTCAGAAGACCTTGTTGAGAAATTCAAAGTCCAGATATCAGATTATAAAATTTTAG TGACTTCAAGGATTACGTTTCCTAGATTTGGCACCCCATGTGTTCTAAAGCCTCTTGCCCATGAAGATGCAATAACCCTT TTCCGTCACTATGCTCTCTTGAAAGATAGTAGTTCAAATATTCCTGACGATAATCTTGTCCAAAAGGTGGTGGGAAGTTG CAAAGGTTTACCACTTGCTATTAAAGTGATTGGTACATCACTCAGGAGTAGGCCTTATGAGTTGTGGCAGAAAATAGTGA AGGAACTGTCACAAGGTCATTCTGTACTTGATTCTCATACTGAGTTACTTACTCGCCTCCAAAAGATCTTAGATGTTTTG GAAGATAATCCTGTCATCAAGGAGTGCTTCATGGACTTAGCATTATTTCCTGAAGACCAAAGAATTCCTGCTACTGCTCT CATTGATATCTGGGCAGCATTGTATGAACTAGATGAACTAGAAGTGATGGACATCATCAAAAAATTGGACTCCATGAATC TGGCTAATTTCTTTGTTGCAAGGAAAAATACAAGTGACACTGATGATTACTACTACAGTAACCACTTCATCGTCCTTCAT GATCTTCTAAGAGAGCTAGGAATTTATCAAAGCATACAGGAACCAGTTGGAAAGAGAAAAAGACTGAACATTGACACGAA CGAAGATAAACTTGAATGGTTGCTTCAGGAGAAGCAGCAAGGCATAATGTCCCGCACGTTGTCAAAAATTCGTAGATTGT GTCTTAAACAGAAGCCTCAACTGGTCCTTGCCCGCACATTGTCTATATCAACTGATGAAACTTGCACTCCAGATTTGTCC CTAATTCAACCAGCTGAAGCTGAGGTTCTGATTTTAAATCTTCGAACTAAGAAGTACTCCCTTCCAGAGATCTTGGAGGA AATGAATAAACTTAAAGCTTTGATAGTCACAAATTACGGTTTCCATCCTTCTGAACTAAACAATTTTGAGCTACTAGACT CTTTATCCAACCTGAAGAGAATCAGACTAGAACAGATTTCTGTTCCTTCCTTTGGCACATTAAAGAATCTTAAAAAGTTA TCCCTCTGCATGTGCAATATCAGGCTGGCCTTTGAAAAGGGTAGCATCCTAATTTCAGATTCATTTCCAAATCTTGAAGA TCTGAACATTGACTATTGCAAGGATATGGTAGGATTGCCTAATGGGGTCTGTGATATTATCTCACTAAAGAAGCTCGGTG TTACTAATTGCCACAAGCTTTCTGGGCTGCCCCAAGAAATTGGAAAGTTGGAGAATTTGGAACTCCTGAGGCTGAGTTCC TGTACTGATTTGAAAGGATTACCAGATTCTATTGGAAGGCTTTCAAAACTAAGACTTCTTGACATATCAAACTGCATAAG CCTTCCAAGTTTGCCAGAGGAAATTGGTAACCTGTGTAATCTAAAAAGTCTCTATATGACAAGTTGTGCAGGGTGTGAAT TGCCATCCTCAATTGTCAATCTTCAGAATCTAACGGTGGTTTGTGATGAAGAGACGGCTGCTTCATGGGAAGCTTTTGAA TATGTGATTCCCAATCTGAAGATAGAGGTTCCTCAGGTTGATGTTAACTTGAATTGGCTTCATTCAACCAGCGTCTAA
Protein sequence (LotjaGi4g1v0109000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADATQLVALAPLARFQEILKKISQMVEKSRKSGIAQRILRSTLIEFNHVVLEIKRYNEHLAQPREEIKTLIREKDAGEE GEKGDKCVNSCLQVFTDRVWHGKDDSDSVDADEKQALTAKDVKETLYKVREILELLTQEDGGAGTSKIKAPFDVPVKPDF TVGLDVPLSKLKMELLKDGVSVVAVTGLGGLGKTTLAAMVCWDKQIKGKFRENILFVTFSKTPNVKNIVERLFEHFGYEV PEFQSNDDAVYQLGPLFKKCEGNPLLLVLDDVWPGSEDLVEKFKVQISDYKILVTSRITFPRFGTPCVLKPLAHEDAITL FRHYALLKDSSSNIPDDNLVQKVVGSCKGLPLAIKVIGTSLRSRPYELWQKIVKELSQGHSVLDSHTELLTRLQKILDVL EDNPVIKECFMDLALFPEDQRIPATALIDIWAALYELDELEVMDIIKKLDSMNLANFFVARKNTSDTDDYYYSNHFIVLH DLLRELGIYQSIQEPVGKRKRLNIDTNEDKLEWLLQEKQQGIMSRTLSKIRRLCLKQKPQLVLARTLSISTDETCTPDLS LIQPAEAEVLILNLRTKKYSLPEILEEMNKLKALIVTNYGFHPSELNNFELLDSLSNLKRIRLEQISVPSFGTLKNLKKL SLCMCNIRLAFEKGSILISDSFPNLEDLNIDYCKDMVGLPNGVCDIISLKKLGVTNCHKLSGLPQEIGKLENLELLRLSS CTDLKGLPDSIGRLSKLRLLDISNCISLPSLPEEIGNLCNLKSLYMTSCAGCELPSSIVNLQNLTVVCDEETAASWEAFE YVIPNLKIEVPQVDVNLNWLHSTSV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 16 | 16 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| PANTHER | 2 | 819 | 818 | 0.0 | – | |
| PANTHER | 2 | 819 | 818 | 0.0 | – | |
| Phobius | 4 | 11 | 8 | - | – | |
| Phobius | 12 | 16 | 5 | - | – | |
| Phobius | 17 | 825 | 809 | - | – | |
| Gene3D | 144 | 300 | 157 | 3.1E-25 | – | |
| SUPERFAMILY | 149 | 413 | 265 | 1.07E-38 | ||
| Pfam | 168 | 383 | 216 | 9.5E-27 | ||
| PRINTS | 182 | 197 | 16 | 3.8E-21 | – | |
| PRINTS | 259 | 273 | 15 | 3.8E-21 | – | |
| Gene3D | 312 | 386 | 75 | 1.5E-5 | – | |
| PRINTS | 347 | 361 | 15 | 3.8E-21 | – | |
| Coils | 383 | 403 | 21 | - | – | |
| Gene3D | 393 | 486 | 94 | 1.2E-6 | ||
| Gene3D | 560 | 725 | 166 | 7.0E-21 | ||
| SUPERFAMILY | 578 | 786 | 209 | 2.82E-25 | – | |
| Gene3D | 726 | 788 | 63 | 1.6E-12 | ||
| PRINTS | 732 | 748 | 17 | 3.8E-21 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi4g1v0109000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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