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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0123300 |
| Transcript ID | LotjaGi4g1v0123300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta-galactosidase; TAIR: AT4G36360.1 beta-galactosidase 3; Swiss-Prot: sp|Q9SCV9|BGAL3_ARATH Beta-galactosidase 3; TrEMBL-Plants: tr|I1JCK7|I1JCK7_SOYBN Beta-galactosidase; Found in the gene: LotjaGi4g1v0123300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:17841365..17846574) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAAACCACCTCGTTTTCCAAATTGGTGGTTGCATTTTGCTTGGCCTTGTGTTTTGGCTCTCAGTTGATTCACTCCAC TGTCACCTATGACAGAAAAGCCATTCTCATCAATGGCCAAAGGAGAATCCTTCTCTCTGGTTCCATACATTATCCCAGAA GTACCCCTGATGTAAGTTTCTTCTTCTTCTCTCCATTTCCCATTTTCCCATTTTCCTTCAAAGAAAAATATTAGAACTTT CTCTGCTTCCCCTGTTTCCCCTGTTTTCCCCTGTTCCTGATTCTCTTGAACAATGATCTCTCTATTTGCAGATGTGGGAA GATCTGATTCAGAAAGCCAAAGAAGGGGGTCTTGATGTAATTGAAACCTATGTCTTCTGGAATGTTCACGAGCCTTCTCC TGGCAATGTACTTCACTCTCTCTTCCAAATTCTCTGGTTTTTGCTCTGTTTTCTAACCTCTGTTTCTCACTGATTTGTGC ATGCAATTGAATTTGCAGTACAATTTTGAAGGAAAGTATGATCTGGTGAAATTCATAAAGACAGTTCAAAAAGCAGGGCT TTATGCTCATCTCCGCATTGGACCTTATGTCTGTGCAGAATGGAATTTTGGGTACCTTTCATCTCTCACTATCTTCCTCC ACATTTTTTTACCATGAATTTTCTTTTATTTAGAACTTTTTTTACATATACCCTTTTTCCGGTGATTATTTATTCAAGAT TATTCTTGTTTTTTTGTAGAGGATTTCCTGTTTGGCTGAAGTATGTTCCTGGCATAAACTTCAGAACTGACAATGAACCT TTCAAGGTCTCATATTTATACACATAACACATTATATAAAATTCCTAAAAACATATTTTATCAGATTTTGGCTCCTGAAC TTCAATCTGACATTGTTTTGTTTCGTTTTCAGAGGGCGATGCAAGGGTTCACTGAGAAGATTGTTGGAATGATGAAGAGT GAGCAACTCTTTCAATCCCAGGGTGGACCTATCATACTCTCTCAGGTACCAATTTTCATTGGACTAGTGCAGTTCTATCT AGTTCGAACAGGATTGCCTCAGTAGATGATACGTGTGGTTAAAAAAATAGTGGCTCAAAACTTTTCACTCTAGATCTAAC TGTAAAGATGACACATTCACTATATGTTGTTTCAGATTGAGAATGAGTATGGGGCACAGAGTAAGTTATTTGGAGCTGCA GGCCAAAACTATGTGAATTGGGCAGCAAAAATGGCTGTAGAAATGGGAACTGGTGTCCCTTGGGTGATGTGTAAGGAAGA TGATGCACCAGATCCAGTGGTGAGAGAGAACTCTCACTTACTATTATTTGATCTTTTGATTATTTTATTTTCTGAGAAAT TTAACATCAAAATTGAAAATTCATAAAGAAAATACAATGCTGCCGTACACGCAACTAGTTGTAGTTCATTTCTTCACTTA AACTAACTAATATGGTAGTTAAATGTTTTTGTCTTGTGGTGGTAATAGATAAACACGTGTAATGGCTTCTACTGTGACAA GTTTACTCCAAATAGAGCCTATAAGCCTACAATTTGGACTGAAGCTTGGAGTGGCTGGTAAGTTTTTTCATTTTTGTATT GTCACACTAAGAATTGGAACCTGAAAGTAAAAAATAGCCTGCATAACTTTTCTGTTAAATATGAAGGTTTACAGAATTTG GAGGTCCAATTCACAAAAGACCTGTTCAGGATTTGGCCTTTGGAGTTGCTAGATTTGTAGCAAGAGGAGGGTCTTTTGTA AATTACTACATGGTTAGTCTGCTTAAAATTGGATTAAAAAAAGGAAAATTTTGAACATGCTTACAACACCTATTGTAATT AAATTAGCCTAAATTGTTTTGCATTTACCTGTAGTATCATGGAGGAACCAATTTTGGACGAACCGCTGGAGGACCTTTCG TCGCCACGAGTTATGACTATGATGCTCCATTAGATGAATATGGTGAGAACTGAAATCTTTGACTTTTACCTTTTAAGTAT TTGTTTGAATGTCAGTTGAATGCAATGTAATCAGACTTTCATTGCAATCTTTCAGAAGAGTTTTGTTCCCCTTTTTTGCC TTAAAGTGTGTGCATAACATTTGCGTAAAAATAGATATAGTCTTGAAGATTTATAGTATTTATTGATCTGGTGACAACAA AAATCGTACATGAATTATGGCAGATAGCTATGCTAATTAAGTAATGCCAGTCACTACATTTTTTTTTCTTAGCAACTTCC GATGCATGAATCTTAACAGATTTTAAGTACAAAAGCTTGTTACTCTTAACTTAATGATTAACTGAGTTCTTCTACTATAA AACAATGCAGGTTTGATTAGGCAACCAAAATATGGTCATCTAAAGGAGCTTCATAGAGCTATCAAGATGTGTGAGCGAGC TTTGGTTTCAACTGATCCAATTATTACTTCATTAGGGGACTTCCAACAGGTTTCAACTCAGTTAAAAATTATTCATCTTT CTACATGTTATTTTAGCTTATTAACTAATCCTAGAGGATATGCAACTTTTCCAGGCTCATGTGTACTCTACAGAATCTGG AGATTGTGCTGCTTTTCTCTCAAACTCTGATGCAAAATCCTCTGCTAGAGTGATGTTCAACAACATGCATTATAGCTTAC CTCCTTGGTCTGTCAGCATCCTCCCTGATTGTAGAAATGTTGTCTTCAACACAGCAAAAGTAAGTAACAAATTTATGACA TATTTTGAACCTGCTTCTGAGGATACAATTTCTTGGACTTGATTTATTAGCAGAAAATTTAGTCCAACCAATGAATCCTG CTGTTTTAGGTTGGAGTGCAAACGTCTCAGATGCAAATGTTGCCAACGAATAATCAAATGTTCCCATGGGAGAGTTTTGA TGAAGAAATTTCTTCTCTGGAGGATGACAGCGCCACAATCACTGCCTCTGGTCTCTTAGAACAGATAAATGTAACACGGG ATACGAGCGATTATCTTTGGTATATAACTAGGTAAGCCTGACATCCTAGGTATTTTAGAATTTCCCTTTGATAAATGAAA TAGATTTAGAAACCATGTTGAATACAATTATTCTGCAATTAATTATATTTCTTTTCTTCAGTGTTGATGTAGGTTCATCT GAATCCTTTCTACATAAAGGTGAACTCCCAACTCTCATGGTTCAGTCTACAGGCCATGCTGTGCATGTTTTCATCAATGG TCAACTTTCTGGTATGTAAATTTACTTTTTTTTTTTTCTTTTAGACCTCCCTTCTAGCTGATTAGTATAAAGTGAATGTG ATATATGATTCTCAAACCAGGTTCTGGTTATGGAACGAGGGAGAGTAGGAGGTTCTTATATACTGGCAAGGTCAACCTTC ATGCTGGAAAAAACAGAATAGCTCTGCTCAGTGTTGCCATTGGACTTCCTGTAAGTTCTGTTTCTCTCTATTTTCCAAAT CTTATGTTCAATAAATTGAGATTATGAAAGCCGTGGAACTAGGCTCCTTGAGATTTAAATCCATCTAATCCATCTATTTT TAAAAAAGAAAACAATTAACAATGGCTAAATTCTTTGTCTGCTAATTATATCACTGACAAAGTGCTTTTCTGTTTTCTGC TGTCAAAGAATGTGGGAAGTCATTTTGAGACATGGAACACAGGAATCCTAGGCCCAGTTGCACTCCATGGACTTGACCAG GGAAAATGGGACTTGTCCGGGCAGAAATGGACATATCAGGTTGGTCTTACAGGCCGTTTGGATGCGGACTAAAGAGCACT TGTGGGAGCTTATGAACACTTTATAGGCTCCCGCATCCAAATGAGCTCTTACTTTAGAAATTTGCTTAAGTTAGCTCACT TTTGAAAAGAAAAACCTTACTAAGGATTGCTTCTAAACAGGTTGGGCTGAAAGGAGAGGCCATGAATCTTGCTTCTCCAA ACAGTATCTCTTCTGTTGACTGGATGCAGTCCGCAATAGTTGTACAAAGAAACCAACCATTAACATGGCATAAGGTAAAT TTATACAGAAATGTGCTCAAGTTTGACTACTAAAAACAAAATATTAGCTTCAAAACATATGAAGTTTAACTGTGAATCGT GCAGGCCTATTTCGATGCTCCGGAAGGAGATGAACCATTGGCATTGGACATGGAGGGTATGGGTAAAGGTCAAATATGGA TTAATGGACAGAGTATTGGAAGATATTGGCTTGCATTTGCTTCTGGTGATTGCAATGGTTGTAACTATGCTGGGTCATTT AGACCAACAAAGTGCCAACTTGGTTGTGGCCAACCAACCCAACGATGGTGAGTATTGCTAAATGCTAATACAAGCAATGA ACTATCTTAAAATTTGGATTAGGTCTAACTCTACCCTAAAAGCTAGCTTATGGGTGAGGGTTAGTCTAATCCTATATAAG GACTTATTTGGCTATACCTCTAGTTATTGTGAGATTTCTCAACAAACTACAATATGCAATACTCACTCAGGCGTGGAATA TCTTATTACTACATTTTGTACAAAAAAATTCAGGTACCATGTCCCCAGATCTTGGTTAAAGCCAACTCAAAATCTATTGG TTATCTTTGAGGAACTTGGGGGAGACCCTTCAAAAATCTCACTTGTGAAGAGATCAGTGAGCAGTGTATGTGCTGATGTA TCAGAGTTCCACCCAAATATTAAGAATTGGCACATTGAGAGCTATGGGAAGTCACAAGAGTTCCGTGCACCAAAGGTTCA CTTGCACTGCAGTCCTGGCCAGACTATCTCTTCCATTAAATTTGCAAGCTTTGGAACTCCTTTGGGGACTTGTGGGAACT ATGAGCAAGGAGCTTGCCATTCACCCGCATCCTATGCCATTTTAGAGAAGGTAAATTTATCATACCTCTCGATTTCGCAA TCCACTACATTGAATCTTAGTGCATGTTTGGAAAACCTTCTATGATTTATTCTAAAGTTATAATCAATTCTGGGAAGAAG CTTCTGTTAGTAACTTTTGGGTACCAGAATTGATTCTGAGAAAATAGAAGTTCATCCAAACACACATATAGTTAGTGTTT CTGTACAATATAGCTAACCTGTGCGCTTTCATTTTTCACAGAAATGTATAGGAAAGCCAAAATGCATAGTCACTGTAACA AACAGCAACTTTGGGCAAGACCCTTGTCCCAATGTAATGAAGAGGTTATCTGTTGAAGCTGTTTGCACTCCAACAAATTG GAGGGGTTGA
CDS sequence (LotjaGi4g1v0123300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAACCACCTCGTTTTCCAAATTGGTGGTTGCATTTTGCTTGGCCTTGTGTTTTGGCTCTCAGTTGATTCACTCCAC TGTCACCTATGACAGAAAAGCCATTCTCATCAATGGCCAAAGGAGAATCCTTCTCTCTGGTTCCATACATTATCCCAGAA GTACCCCTGATATGTGGGAAGATCTGATTCAGAAAGCCAAAGAAGGGGGTCTTGATGTAATTGAAACCTATGTCTTCTGG AATGTTCACGAGCCTTCTCCTGGCAATTACAATTTTGAAGGAAAGTATGATCTGGTGAAATTCATAAAGACAGTTCAAAA AGCAGGGCTTTATGCTCATCTCCGCATTGGACCTTATGTCTGTGCAGAATGGAATTTTGGAGGATTTCCTGTTTGGCTGA AGTATGTTCCTGGCATAAACTTCAGAACTGACAATGAACCTTTCAAGATTTTGGCTCCTGAACTTCAATCTGACATTGTT TTGTTTCGTTTTCAGAGGGCGATGCAAGGGTTCACTGAGAAGATTGTTGGAATGATGAAGAGTGAGCAACTCTTTCAATC CCAGGGTGGACCTATCATACTCTCTCAGATTGAGAATGAGTATGGGGCACAGAGTAAGTTATTTGGAGCTGCAGGCCAAA ACTATGTGAATTGGGCAGCAAAAATGGCTGTAGAAATGGGAACTGGTGTCCCTTGGGTGATGTGTAAGGAAGATGATGCA CCAGATCCAGTGATAAACACGTGTAATGGCTTCTACTGTGACAAGTTTACTCCAAATAGAGCCTATAAGCCTACAATTTG GACTGAAGCTTGGAGTGGCTGGTTTACAGAATTTGGAGGTCCAATTCACAAAAGACCTGTTCAGGATTTGGCCTTTGGAG TTGCTAGATTTGTAGCAAGAGGAGGGTCTTTTGTAAATTACTACATGTATCATGGAGGAACCAATTTTGGACGAACCGCT GGAGGACCTTTCGTCGCCACGAGTTATGACTATGATGCTCCATTAGATGAATATGGTTTGATTAGGCAACCAAAATATGG TCATCTAAAGGAGCTTCATAGAGCTATCAAGATGTGTGAGCGAGCTTTGGTTTCAACTGATCCAATTATTACTTCATTAG GGGACTTCCAACAGGCTCATGTGTACTCTACAGAATCTGGAGATTGTGCTGCTTTTCTCTCAAACTCTGATGCAAAATCC TCTGCTAGAGTGATGTTCAACAACATGCATTATAGCTTACCTCCTTGGTCTGTCAGCATCCTCCCTGATTGTAGAAATGT TGTCTTCAACACAGCAAAAGTTGGAGTGCAAACGTCTCAGATGCAAATGTTGCCAACGAATAATCAAATGTTCCCATGGG AGAGTTTTGATGAAGAAATTTCTTCTCTGGAGGATGACAGCGCCACAATCACTGCCTCTGGTCTCTTAGAACAGATAAAT GTAACACGGGATACGAGCGATTATCTTTGGTATATAACTAGTGTTGATGTAGGTTCATCTGAATCCTTTCTACATAAAGG TGAACTCCCAACTCTCATGGTTCAGTCTACAGGCCATGCTGTGCATGTTTTCATCAATGGTCAACTTTCTGGTTCTGGTT ATGGAACGAGGGAGAGTAGGAGGTTCTTATATACTGGCAAGGTCAACCTTCATGCTGGAAAAAACAGAATAGCTCTGCTC AGTGTTGCCATTGGACTTCCTAATGTGGGAAGTCATTTTGAGACATGGAACACAGGAATCCTAGGCCCAGTTGCACTCCA TGGACTTGACCAGGGAAAATGGGACTTGTCCGGGCAGAAATGGACATATCAGGTTGGGCTGAAAGGAGAGGCCATGAATC TTGCTTCTCCAAACAGTATCTCTTCTGTTGACTGGATGCAGTCCGCAATAGTTGTACAAAGAAACCAACCATTAACATGG CATAAGGCCTATTTCGATGCTCCGGAAGGAGATGAACCATTGGCATTGGACATGGAGGGTATGGGTAAAGGTCAAATATG GATTAATGGACAGAGTATTGGAAGATATTGGCTTGCATTTGCTTCTGGTGATTGCAATGGTTGTAACTATGCTGGGTCAT TTAGACCAACAAAGTGCCAACTTGGTTGTGGCCAACCAACCCAACGATGGTACCATGTCCCCAGATCTTGGTTAAAGCCA ACTCAAAATCTATTGGTTATCTTTGAGGAACTTGGGGGAGACCCTTCAAAAATCTCACTTGTGAAGAGATCAGTGAGCAG TGTATGTGCTGATGTATCAGAGTTCCACCCAAATATTAAGAATTGGCACATTGAGAGCTATGGGAAGTCACAAGAGTTCC GTGCACCAAAGGTTCACTTGCACTGCAGTCCTGGCCAGACTATCTCTTCCATTAAATTTGCAAGCTTTGGAACTCCTTTG GGGACTTGTGGGAACTATGAGCAAGGAGCTTGCCATTCACCCGCATCCTATGCCATTTTAGAGAAGAAATGTATAGGAAA GCCAAAATGCATAGTCACTGTAACAAACAGCAACTTTGGGCAAGACCCTTGTCCCAATGTAATGAAGAGGTTATCTGTTG AAGCTGTTTGCACTCCAACAAATTGGAGGGGTTGA
Protein sequence (LotjaGi4g1v0123300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
METTSFSKLVVAFCLALCFGSQLIHSTVTYDRKAILINGQRRILLSGSIHYPRSTPDMWEDLIQKAKEGGLDVIETYVFW NVHEPSPGNYNFEGKYDLVKFIKTVQKAGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGINFRTDNEPFKILAPELQSDIV LFRFQRAMQGFTEKIVGMMKSEQLFQSQGGPIILSQIENEYGAQSKLFGAAGQNYVNWAAKMAVEMGTGVPWVMCKEDDA PDPVINTCNGFYCDKFTPNRAYKPTIWTEAWSGWFTEFGGPIHKRPVQDLAFGVARFVARGGSFVNYYMYHGGTNFGRTA GGPFVATSYDYDAPLDEYGLIRQPKYGHLKELHRAIKMCERALVSTDPIITSLGDFQQAHVYSTESGDCAAFLSNSDAKS SARVMFNNMHYSLPPWSVSILPDCRNVVFNTAKVGVQTSQMQMLPTNNQMFPWESFDEEISSLEDDSATITASGLLEQIN VTRDTSDYLWYITSVDVGSSESFLHKGELPTLMVQSTGHAVHVFINGQLSGSGYGTRESRRFLYTGKVNLHAGKNRIALL SVAIGLPNVGSHFETWNTGILGPVALHGLDQGKWDLSGQKWTYQVGLKGEAMNLASPNSISSVDWMQSAIVVQRNQPLTW HKAYFDAPEGDEPLALDMEGMGKGQIWINGQSIGRYWLAFASGDCNGCNYAGSFRPTKCQLGCGQPTQRWYHVPRSWLKP TQNLLVIFEELGGDPSKISLVKRSVSSVCADVSEFHPNIKNWHIESYGKSQEFRAPKVHLHCSPGQTISSIKFASFGTPL GTCGNYEQGACHSPASYAILEKKCIGKPKCIVTVTNSNFGQDPCPNVMKRLSVEAVCTPTNWRG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 8 | 8 | - | – | |
| Phobius | 1 | 26 | 26 | - | – | |
| PANTHER | 8 | 859 | 852 | 0.0 | – | |
| PANTHER | 8 | 859 | 852 | 0.0 | ||
| Phobius | 9 | 19 | 11 | - | – | |
| Phobius | 20 | 26 | 7 | - | – | |
| Gene3D | 23 | 359 | 337 | 2.8E-110 | – | |
| SUPERFAMILY | 25 | 360 | 336 | 1.04E-103 | ||
| Phobius | 27 | 864 | 838 | - | – | |
| Pfam | 35 | 355 | 321 | 1.2E-113 | ||
| PRINTS | 38 | 55 | 18 | 7.5E-75 | ||
| PRINTS | 59 | 77 | 19 | 7.5E-75 | ||
| PRINTS | 114 | 133 | 20 | 7.5E-75 | ||
| ProSitePatterns | 189 | 201 | 13 | - | ||
| PRINTS | 266 | 281 | 16 | 7.5E-75 | ||
| PRINTS | 303 | 318 | 16 | 7.5E-75 | ||
| PRINTS | 323 | 339 | 17 | 7.5E-75 | ||
| Pfam | 363 | 434 | 72 | 1.6E-28 | ||
| SUPERFAMILY | 418 | 590 | 173 | 3.06E-29 | ||
| SUPERFAMILY | 600 | 764 | 165 | 6.8E-29 | ||
| Gene3D | 610 | 749 | 140 | 3.6E-14 | ||
| PRINTS | 636 | 650 | 15 | 7.5E-75 | ||
| PRINTS | 663 | 679 | 17 | 7.5E-75 | ||
| Gene3D | 769 | 863 | 95 | 8.6E-14 | ||
| ProSiteProfiles | 776 | 858 | 83 | 17.864 | ||
| Pfam | 780 | 857 | 78 | 1.2E-21 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. | ||
| Molecular function | Carbohydrate binding | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates. |
Expression pattern of LotjaGi4g1v0123300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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