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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0124300 |
| Transcript ID | LotjaGi4g1v0124300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Forkhead-associated (FHA) domain protein; TAIR: AT3G54350.1 Forkhead-associated (FHA) domain-containing protein; Swiss-Prot: sp|Q96EZ8|MCRS1_HUMAN Microspherule protein 1; TrEMBL-Plants: tr|V7CD65|V7CD65_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0124300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:18006888..18012962) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGATCCTCATCCATGTTTATCACAGAATTTTTATATAAATAGAGTGGGTCCTATAGGGAATCATTTTCCCGAATATG TTCTTAGAAGAGGGTGACGAAGCTCACGAGGTTCCGAAGCCACGCCGGTAACCCACGGCCACCATTCACTCTTCCCACAC TCTCACAACCACCACTCACCACCACCACCACCGCCGTCATCACCACCGTCACTTCACTCAAAACGCCGCCGCCGCCGCTC GCAATTCCCCAATTCAACACAACCGCCGCAAAACAACCTTCTTCTCCGTCGCTTCCATGAATCCCTCCGCCGCAGCGCCA CTCTGGATCCCCGAAGATGATTTTCTCCTCAAGAACGCCGTCGAGGTACTCTCTCTCTCTCTCTCCGCATTCCATTCCTC TCTCTCTCTCTCTCTCTGTGTTTGATTCGCATTCAATTTCACGCTCGCTTTCTCTTTCGAAATTCTCTTACTCTTCCTGC TCCGGGAAGCTAGAAACGAAACCCTAGCCTCTGTTTCGCTCTTCGGTTCCGTCAATTTTGATGTGTTTGCCCTAACGAAG CTGAATTGTTCACTGCAGGCTGGAGCTTCGCTCGAATCGCTGGCCAAAGGAGCGGTTCGATTCTCCCGGAGGTACTCCCT CACGCAAATTCAGGATCGGTGGCGCTCTATCCTCTATGGTCCTGAAGAATCGGCTAAGGCTGCAGCTTCCATGCTGAATT TGGAGCTTAGCAGGTTCGCCGGCGCCGGAGCCGGAGCCAAGGAAGCAGCGTCCGACGCCGGCAACGGCCGCCGGGTGAAG ATGAAAATCGAGACGTTCCGCAAGAGGAAAAGGGATTCGCTCCGGAAGCAGTACTACGAGAGGATGAGGATGCGGAAGTT GATTCGCATGGAGGTTTTGGACTCTTTGGATATTGGGTTCGATGATGGAGTGAGAATCGTTGATGACGCGGTTGGCTATG AAGGAGATGAAATTGGAGGTAATTTGAATTGTGACATGAACCATTTGCATGTGGATAGTGTTGTTGGTTTTGATGAAGCA GGGGTGGGGCCATTGAATTCAATGAGTGATGCCCCTCTGTGGAAGACAATTGAGGATGTTTCTGCTCCTGTTTTGCCTAG TGGCAATGCTGTGTTGAGTGTTCCTGGTGGTGCTGCTGTGTTGGGAGAGGAGGGTGTGCGGATTTCTGATTCTCTCATGG ATTTGACCAATGGGGATGATGAGGGGCTTCTGTTGGATGGGACCGCGAAGGAGAAGCTGGGTTGTGATGATAAAATTGTT TCTGAGAATGTTGATGCATCTGTTGTTGTTCCTGAATTGCTGAAGCTGGATACAGGAACAAAACTTGCTGTGCGAAGGGG GTCATCTGCTGCTGAGCTAGGGGTTGGTTTCAACTCTTCAGGTGAAAGTCATGGGGATATGGATCTGGTTTCTGATCCGG GAAATGAAGTACGACCATCATCGGCTACTGCTGCAGTACAAAGTCCTCACCCTGAAAGAAGTGAGGACCTTAGGATCTGT GTTTTGAACACTGAGGATACTGATGTCCCTGTTAATGACAGTGTAAATCTATCTGTTGTAGCTCCCCGTTCGGTGGCTAT GAAATCTCAACGGGTTGCTAATGACTGTGTAAATGTATCTGATGTAGTTCCTCGTTCGGTGGTTGCTAATGACTGTGTAA ATGTATCTGTTGTAGCTCCTCGTTCGGTGCCTCTGAAATCTCAATCGATTGCTAAAGAGGTGGGTTATTCAGATCCCTCT ATTAGTAATCAAAGGAAAAATGTACCAGCCGGAAGCTTGGAGAAAGAAGAAATGAACAGGGCGGGTTTAGTGCCTACTAT AAACTCAAGCAATACGCCTATTGGGGTTGTAATGAAAGCTGAAATTTCTACTGGAAACTCTATTTCTGCAGTTTCTAGAC AGAATAATAATGTCAACATCAAGCCAAGTCAGAGCAGATTAGGGCATGCAAAACAAGAGGTTAAATGCGTTTATTCCAGA ATACTTCTTCATTGGAAAATTTATTTGGGAACTAATTTATGACTTTTGCTTTTATTAAGAAGAGTGCACTAATATTGTAC GTTATAAACAGGAAATCGATGCTTTGGCTTCTGCTGTAGTTTATGCACATCCAAAGGCAAAGGATCATATGGCTTCGAAG AAATTGGAAGAAAAATCATTGTCACACCGTCAGGAAGAAGGAGATGATGATGATAGCGATGCTGATGACAGCGATGAGGA TGAAATTCCTTACTATTCTGATGCTGAGAAAATGGTAAGTAGTATATGTTGCATTCAGTAGTAAAGGTTTCCAATATTTA ATTGTGCTACGTTATCTGATATTCTTGATGTTGCTTGCTCAGATTCTTGAAATGGATTTATGTCCAGCTGATGAAGATAT AAATGCAAGTAGAGAAGGTAAATCATCTGACACTATAAAATATAATGATCACAATTCTGCTCAAGGTTTTAAATTTTAAA AGGGCAGTCCATTGCTCATTGCTCTCCCCATATGGGATCTAGCCATCTAGAGAGGGCAAAATATTCAAAACCTTACCCTG TAAGTGGAGGGGTTGCTTGTGTCACTAAAGCCTATGACCACCTGGTCACAGGGCAGCAAAACTTACTATAGTGCCAGAGC TCACCCCTGGCATAAAGTTTAGTTTTACTTTCAAAGTTATTAAAATTTTAAAATCAGGTCTGAATTTTTAAACCAAAAGG GGAATTCATTGTTTGGTGTTACATTTTTTATTTCTTTTTGTGAGTTTTCTTATAATTGAATCCGCATTCCTTTATTATTA CTATGGTGGTCGGTCTTCGTTAAAGTTTCAAATGCACAGAGTGGTGGCTAAATTGCAGATTCAATTATTGATTCTAGATG TTTTAGTACCAATATTTTTCCTCATTGAATTTATCAATTTCTAGGTATTTTAATGATGATAATTTGTCTTCTAATTATAT TCCTTTATTAGTCTTGGAGTATCAACATGAAGAAACAAAGAGGGCCATCATGAGATTGGAGCAATGTGCTCATGCCTTCA CGCAAAGAGCCATTGCATCTGAAGGTGCACTTGCGGTATTGTATGGGCGCAAGATGAAGCAGTATATTAAGAAAAGTGAG GTGCGCTTAGAAATTAGGACCTCTTGTTTTCCTTTGAATAATGGAAGTAGGAATCTTTACTTATATTGTCTTCCTCTCAC TCACCATAATGAATTTTATAAGATTTTGTTTTAAGAATGTTAGATACCATTTTAAGGCGAGTTTTCATGTCATTGTGATT TCCATGGCATGATTTGTTGTCTTGCATAATAATTGTCTCGTATCATGACATAGCCATTAATGCTTTAGCTTTCTTAATTT GACCAATGAACAGACTAGCTTTAAGTGGTCTTGTGACTTGTAGATTTTTGTATTCTTCATGGAGTTTATGGTTGTTGAGG ATCTTATTTTCCTATTTGTTCATACCTTCTATATATAACATATTCAAGTTTATCAAATGGAGATTTGGATCGTGAATTGG TGTATTTATTTTCCAGATCATGATCAAATCTTTTGGTGAATTATTATAAGATATACTATCAATAACTAAAAGTAACATAG TATAGTTTTACCTAAAGAAACATTTAAAACAAAAATATGAGCATCTTTAAGTCAAAAAAGTGAACAACTATGTAAAAAAT GATACAAAAGCCATATATGAACTTCAAAATAATCTAAGATCCATTCCATAAATCAAAATGACAAAATAAAAAATGGCTGG ACCTGTCAAAAAAACATCAATAAGGTACACTAAATTCTTCTTTTTGTGTTTTTCAGCTGTTTAAATGATTTTTCTCATCT TCTGGAGAATCTTTATTTCACAGGTCATACTTGGCAGAGCAACAGAAGGTGTGCAAGTTGATATTGACTTAGGAAGAGAA GGGCGTGCTAACAAAATATCTAGAAGACAAGTAAGTTTTCTGGGAAGCTTGGGTTGAAAATTTCTTTGTATGGTTAATTT TACTGAAAGTCCTTTTTAAGTTCATATGTTGATTTTAATGATGAATTGAAAGTCCTTTTAACACACGCAAACACACACAC AAATGTATATACATATAGAAGAGGGATCAACTTACACCACTTAAGTTTTTACACTGTCACATCTGAAAACTTGTGAGTCG TCAATTTCGATAAAATAGAGCTTTTAGTGGTTAAATCAATGGATGCTTGTGAGTGTAAGAGTTTAAAGAGATGTAAGTTG ATCCCTTACTCATATATACTCCTCTAGGTCTCACATGAGAGAGTCTCTCATACAATACATCCCCTATATTTCTTGGTGGG GTAAGAGGGGTTTGGAAGGCTTTGGTAGTTTTGTTTGAAAAGTAGTGCATGAAATTCTCTTTCTTTTCTAATAGCAGAAT CACTATTAAAGTATTGGTGTATTTCTGGAGGACAAATGACAAACTTTTAATAGCTTTGGTTCAGCGTTTGGAATGTGTTC TTACAATTTTTTTGGGTAATAGAACTAAATAGGGTTATTATGATGATGTTTGGATCTGTTCCAGGAGAATATTTGTCCAT CCTGAAAATCCAGAAGTTTTTAGTCATATGCTTTTAAATTTTTAGATTTCCTCCACTGAATTTATAGTAAATGAAGTTGT GAACTATAAAATACTTATTATTGTCGACAGGCCTTGATAAAGATGGATGCAAATGGTTCTTTCATTATTAAGAATCTTGG CAGGAGATCTATCTTCTTGAATGGCAAAGAAGTTGCCCATGGACAGCTGCGTGGTCTCAGTCCTAGTTGTTTGATCGAGG TAACCGCTCCCCTTTCTGTTTTTAAATAACTTAAAATTACAGTGCTGCATTTTTGGTTTCTTTTTACCTTAAGGGCGTAA TCATTTATGGTAAATGGCTTACATGCAGATTACTGGCCTGTCGTTCGTCTTTGAGTTCAATAGCATGTCTGTTAAGAGGT TTTTAGAAAATGTGGATCCAAAGAGAGAAAGCTGAAAGGAAGACATATTAGGATAATGTCATGCCGGCCAAAAAATAGAA GTTAGAACAGTTATTATTTAACATTAAGGTATTGTCATCCAGTCAGAACTCATAGTAGACATGTGATGTAGATTTAAGAT ATAATAACTAAAGAAGCTATATAATTATTATAAATATAGATGGGGGAACTTAATTGTTATTAATCTCTCTGTTTTAATTT CCTTTTTGCTATAATTCTTTTGGCAACCAACATCCTGCGTTATCAGTAGCATGAAATTCCAATTCAGGAGTATGTATCAG CAGTAACATGTAACTTGTGGTCGCCATCATACACCTGCTTCCTGTCACAAGCTCTTTTGTTTTCCCTTGTTGCAATGACA TTTCATTACTACTTAACGTCGCATAGATGGTTGGTGATCCGATCCTCTTTTAGCTGAGATTTTGGCTATTTTCAGGGGAT TAAAGTTGTGTTTGAGATTTGAGTTTCAGGAAAGTTATTTGTGAGACTTATAATTTGTACATTGTGAATTTGTCACAGTC CATGCAATCTGTTCATAGATATACTTAAGCTTTGTGGATTTCAGATGTGTTGGATCTTCTAAAAATTTCCTAGGTGTCTG TTGTGCATGATAATGCTCTTAGCTCATCAAGATGGCAAAGTTTGGTCATCAAGATGGTGTGTGTGATCAGTTATGGGACC TCCCCCCTAATTCTGTGTTTCATGTTCTTTCTTAGACAATGCTCTTCGTTTCTTGTCTCTTTATTTCCTGTACAGTGATC GCACTTTGATCATGACTGCACAATGACATCTTCTACTCATCATCACTCATTGAACTATGTAGCTTCAAGCCCTGCACCTT GCAAGTGTCCCCCATATTTTCTGCAATCTCGGTCGTCCCTTGGCCTAACTATATTGCTAGTGTCAAACCATCATCATTCT CATTCATCCCATTTGTCTTTCTTTTCCCCATGAATCCCAGTGTCTCGCATCTTCGTCTATGCTGGTTTCACGAGCTACGC TACGCTACCATGGCCGGTTTGTCTCTCAACCACACTTTCTGTCAGTATGGTCATTCCATTCCTTTCTTCTTTTCT
CDS sequence (LotjaGi4g1v0124300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATCCCTCCGCCGCAGCGCCACTCTGGATCCCCGAAGATGATTTTCTCCTCAAGAACGCCGTCGAGGCTGGAGCTTC GCTCGAATCGCTGGCCAAAGGAGCGGTTCGATTCTCCCGGAGGTACTCCCTCACGCAAATTCAGGATCGGTGGCGCTCTA TCCTCTATGGTCCTGAAGAATCGGCTAAGGCTGCAGCTTCCATGCTGAATTTGGAGCTTAGCAGGTTCGCCGGCGCCGGA GCCGGAGCCAAGGAAGCAGCGTCCGACGCCGGCAACGGCCGCCGGGTGAAGATGAAAATCGAGACGTTCCGCAAGAGGAA AAGGGATTCGCTCCGGAAGCAGTACTACGAGAGGATGAGGATGCGGAAGTTGATTCGCATGGAGGTTTTGGACTCTTTGG ATATTGGGTTCGATGATGGAGTGAGAATCGTTGATGACGCGGTTGGCTATGAAGGAGATGAAATTGGAGGTAATTTGAAT TGTGACATGAACCATTTGCATGTGGATAGTGTTGTTGGTTTTGATGAAGCAGGGGTGGGGCCATTGAATTCAATGAGTGA TGCCCCTCTGTGGAAGACAATTGAGGATGTTTCTGCTCCTGTTTTGCCTAGTGGCAATGCTGTGTTGAGTGTTCCTGGTG GTGCTGCTGTGTTGGGAGAGGAGGGTGTGCGGATTTCTGATTCTCTCATGGATTTGACCAATGGGGATGATGAGGGGCTT CTGTTGGATGGGACCGCGAAGGAGAAGCTGGGTTGTGATGATAAAATTGTTTCTGAGAATGTTGATGCATCTGTTGTTGT TCCTGAATTGCTGAAGCTGGATACAGGAACAAAACTTGCTGTGCGAAGGGGGTCATCTGCTGCTGAGCTAGGGGTTGGTT TCAACTCTTCAGGTGAAAGTCATGGGGATATGGATCTGGTTTCTGATCCGGGAAATGAAGTACGACCATCATCGGCTACT GCTGCAGTACAAAGTCCTCACCCTGAAAGAAGTGAGGACCTTAGGATCTGTGTTTTGAACACTGAGGATACTGATGTCCC TGTTAATGACAGTGTAAATCTATCTGTTGTAGCTCCCCGTTCGGTGGCTATGAAATCTCAACGGGTTGCTAATGACTGTG TAAATGTATCTGATGTAGTTCCTCGTTCGGTGGTTGCTAATGACTGTGTAAATGTATCTGTTGTAGCTCCTCGTTCGGTG CCTCTGAAATCTCAATCGATTGCTAAAGAGGTGGGTTATTCAGATCCCTCTATTAGTAATCAAAGGAAAAATGTACCAGC CGGAAGCTTGGAGAAAGAAGAAATGAACAGGGCGGGTTTAGTGCCTACTATAAACTCAAGCAATACGCCTATTGGGGTTG TAATGAAAGCTGAAATTTCTACTGGAAACTCTATTTCTGCAGTTTCTAGACAGAATAATAATGTCAACATCAAGCCAAGT CAGAGCAGATTAGGGCATGCAAAACAAGAGGAAATCGATGCTTTGGCTTCTGCTGTAGTTTATGCACATCCAAAGGCAAA GGATCATATGGCTTCGAAGAAATTGGAAGAAAAATCATTGTCACACCGTCAGGAAGAAGGAGATGATGATGATAGCGATG CTGATGACAGCGATGAGGATGAAATTCCTTACTATTCTGATGCTGAGAAAATGATTCTTGAAATGGATTTATGTCCAGCT GATGAAGATATAAATGCAAGTAGAGAAGTCTTGGAGTATCAACATGAAGAAACAAAGAGGGCCATCATGAGATTGGAGCA ATGTGCTCATGCCTTCACGCAAAGAGCCATTGCATCTGAAGGTGCACTTGCGGTATTGTATGGGCGCAAGATGAAGCAGT ATATTAAGAAAAGTGAGGTCATACTTGGCAGAGCAACAGAAGGTGTGCAAGTTGATATTGACTTAGGAAGAGAAGGGCGT GCTAACAAAATATCTAGAAGACAAGCCTTGATAAAGATGGATGCAAATGGTTCTTTCATTATTAAGAATCTTGGCAGGAG ATCTATCTTCTTGAATGGCAAAGAAGTTGCCCATGGACAGCTGCGTGGTCTCAGTCCTAGTTGTTTGATCGAGATTACTG GCCTGTCGTTCGTCTTTGAGTTCAATAGCATGTCTGTTAAGAGGTTTTTAGAAAATGTGGATCCAAAGAGAGAAAGCTGA
Protein sequence (LotjaGi4g1v0124300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNPSAAAPLWIPEDDFLLKNAVEAGASLESLAKGAVRFSRRYSLTQIQDRWRSILYGPEESAKAAASMLNLELSRFAGAG AGAKEAASDAGNGRRVKMKIETFRKRKRDSLRKQYYERMRMRKLIRMEVLDSLDIGFDDGVRIVDDAVGYEGDEIGGNLN CDMNHLHVDSVVGFDEAGVGPLNSMSDAPLWKTIEDVSAPVLPSGNAVLSVPGGAAVLGEEGVRISDSLMDLTNGDDEGL LLDGTAKEKLGCDDKIVSENVDASVVVPELLKLDTGTKLAVRRGSSAAELGVGFNSSGESHGDMDLVSDPGNEVRPSSAT AAVQSPHPERSEDLRICVLNTEDTDVPVNDSVNLSVVAPRSVAMKSQRVANDCVNVSDVVPRSVVANDCVNVSVVAPRSV PLKSQSIAKEVGYSDPSISNQRKNVPAGSLEKEEMNRAGLVPTINSSNTPIGVVMKAEISTGNSISAVSRQNNNVNIKPS QSRLGHAKQEEIDALASAVVYAHPKAKDHMASKKLEEKSLSHRQEEGDDDDSDADDSDEDEIPYYSDAEKMILEMDLCPA DEDINASREVLEYQHEETKRAIMRLEQCAHAFTQRAIASEGALAVLYGRKMKQYIKKSEVILGRATEGVQVDIDLGREGR ANKISRRQALIKMDANGSFIIKNLGRRSIFLNGKEVAHGQLRGLSPSCLIEITGLSFVFEFNSMSVKRFLENVDPKRES
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 7 | 138 | 132 | 7.0E-141 | ||
| PANTHER | 7 | 138 | 132 | 7.0E-141 | – | |
| Pfam | 10 | 76 | 67 | 1.1E-13 | ||
| PANTHER | 295 | 714 | 420 | 7.0E-141 | ||
| PANTHER | 295 | 714 | 420 | 7.0E-141 | – | |
| MobiDBLite | 311 | 331 | 21 | - | – | |
| MobiDBLite | 507 | 541 | 35 | - | – | |
| MobiDBLite | 507 | 527 | 21 | - | – | |
| Gene3D | 572 | 712 | 141 | 1.9E-8 | – | |
| SUPERFAMILY | 612 | 703 | 92 | 2.69E-10 | ||
| CDD | 616 | 703 | 88 | 2.01425E-10 | ||
| SMART | 619 | 676 | 58 | 3.1E-6 | ||
| Pfam | 620 | 692 | 73 | 7.0E-6 | ||
| ProSiteProfiles | 620 | 676 | 57 | 11.656 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | G-quadruplex RNA binding | Interacting selectively and non-covalently with G-quadruplex RNA structures, in which groups of four guanines adopt a flat, cyclic hydrogen-bonding arrangement known as a guanine tetrad. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Cellular component | Ino80 complex | A multisubunit protein complex that contains the Ino80p ATPase; exhibits chromatin remodeling activity and 3' to 5' DNA helicase activity. | ||
| Cellular component | MLL1 complex | A protein complex that can methylate lysine-4 of histone H3. MLL1/MLL is the catalytic methyltransferase subunit, and the complex also contains the core components ASH2L, HCFC1/HCF1 WDR5 and RBBP5. |
Expression pattern of LotjaGi4g1v0124300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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