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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0144100 |
| Transcript ID | LotjaGi4g1v0144100.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pentatricopeptide repeat-containing family protein; TAIR: AT4G19440.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440, chloroplastic; TrEMBL-Plants: tr|A0A151UI84|A0A151UI84_CAJCA Uncharacterized protein; Found in the gene: LotjaGi4g1v0144100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:22920412..22928244) extracted from Lotus japonicus Gifu genome v1.2.
CAAAAGGTACATGTGTAACCTTACACAAGTTTTTACTTGTGCATGCTAAATTTTTCCCTTTTTGCCCAACAACATTTGTC ATCCTTTATTCCCTCTCATTTTGGTCCCTCTGGGCCTATAGAGAGCAACGAAGCGCTACACGGCCCATTTCCGTAAAGCC CACGTTTCTACTTCTCCCACCCTCACCCTCACGGTGTTCGCCTCGCGCAGTCGCAGAGGCCGAGTCTGCGTGCCCTGCGG AACTGTTCAATACCAAAACAAAACCTGAGGGAAACACCCCATCGACGTAACCATTCTCTGCATCAAACCGTGGCACTTTC ACACCCTCTCTCTTTCTCTCTTCACCTAACTATCAATTCATGGCGTCAAAACCGCCACACTTATAGCAAACAACCACCAC ATCTTCACAATCCCTCAATGCAATGCTCTCCGCCACCATGGATTTCACAAGGATCTTAACCACTAAACCTCCCCCTTTCT TCACTCGCCCCGTCACCTGGATCACCTCCACCACCGCCAACCACCTCAACTTCCCTCTACCGCCGCCACCTCCGCCGCCA GGCCCCAACCACGCTCCTCCACTCTCCCTACCTTCTATCCTCACAAGCAAAGTTCTAGATTCTTCCAAATGCAAGTCGAT TTTACCCCATTTATCCCCTCACGAATTCGACCGGTTATTCCTCTCTCTCCACCCCACCGTCAACCTCAAAACCACGCTCG AGTTCTTCCGTTTTGCCGCCACGCGGTTCAAGTTCCCCTTCACGGTTCGTTCTTATTGTCTCTTGATTCGTTTGCTCCTG GCTTCGAATCTTTTACCTCGAGCCAGGTCGATGTTAACCCGTTTGATCGATGGTAACGTGGTTACGCCGATTGGGAACCT TGATGATAGGCTCCGTGAAATCGCGTCTTCAATGCTGGAGCTGAACCGCGTCACGGGGCGAAAGCACGGTGAGCTGGATT TGTTGCTTCACGTTCTGTGTTCGCAGTTTAAGCATTTGAGTGTTCACTGGGCATTTGATATATTCACCACGTTTACCAAT AGTGGCATCTTTCCGTCGCTGAAAAGTTGTAATTTTCTGTTGGGCTCTCTGGTGAAGGCTAATGAGCTTGAGAAGAGTTA TCAGGTGTTTGACGCGGCTTGTCTCGGTGTTTCCCCTGATGTTTACACGTTCAGCACCGCGATTAACGCGTTTTGTAAAG GTGGGAGGGTTGATGATGCTGTTGCTTTGTTCTTCAAAATGGAGGAGCAGGGTGTTTCGGCTAATGTTGTTACGTACAAT AATGTGATTGATGGGTTATGCAAGAGTGGAAGGTTAGAAGAAGCCTTTCGGTTTAAGGATAAGATGGTGAAGAACAGAGT GAAACCGAGTGTCGTTACTTATGGGGCTCTTATTAATGGTTTGATGAAGAAGGAGAGATTTGATGAGGAAAATTCGGTTT TGTTTGAAATGTATAGCAAAGGGGTTGCTCCTAATGAGGTTGTTTTTAATGCACTGATTGATGGGTACTGCAGAAAGGGG CATATGGTTGAGGCATTGAGGATCAGGGATGATATGTTGTTGAAGGGTGTGAGACCCAATGCTGTTACTTTTAATACTCT TTTACAAGGATTTTGCAGGAGCAATCAAATGGAGCAAGCGGAGCAAGTGTTGCGATACTTGTTGTCAAGTGGGATGTCCA TTAACCAGGATGCATGTTCTTATGTGATTCATTTGCTATGCAAGAATTCCAGGTTCGATTCAGCCTTGAAAATTGTTAAG GGATTGTTGTCGAGGAACATTAAGGCTGGTGATAGCTTGCTAACTGTGTTGGTTTCTGGACTTTGTAAATGTGGTAAACA TCTGGAAGCCATTGAGCTTTGGTTTAGTCTAGCAGATAAAGGGCTTGCAGCCAATACAGTGACCTCAAATGCTCTTCTCG ATGGTCTTTGCGAACGTGGGAACATGGAGGAGGTTTCTGCAGTACTCAAGAAAATGCTTGAGAGAGATTTTTTACTGGAT ATGATCTCATACAACACACTTATTTTTGGCTGTTGTAAATCGGGCAGAATCGAGGAAGCTTTTAAGCTTAAGGAGGAGAT GGTTAAGCAAGAATTCCAACCTGATATTTATACCTACAATTTCCTGATGAAAGGATTAGCGGATATGGGAAAAATAGATG ATGTGAATAAGCTTTTGAATGAAGTTGTAGAACATGGTCTGGTTCCAAATGTCTATACATATGCACTTTTGTTAGAAGGA TATTGTAAGGTTGATCGGCCTGAAGATGCTATGAACTTATTCAACAAGTTAGTTGATGAGGACGTAGAGCTAACTTCTGT TATTTATAACATACTTATTGCAGCTTATTGTAGAATTGGGAATGTGATGAAAGCTTTTGAAATCCGTGATGCTATGAATA GTAGGGGCATTCTACCAACATGTGCCACATATTCTTCTTTAATACATGGAATGTGTTGTCTTGGCCGTGTAGATGAGGCA AAGGAAATTTTTGAAGATATGAGAAATGAAGGATTGTTGCCAAATGTATTTTGTTATACTGCTCTAATTGGTGGTTACTG TAAGTTAGGTCAGATGGATGAAGCTGAGAATATCTTACTGTTAATGTCTTCAAACAGTATACAACCTAATAAAATTACCT ACACTATTATGATTGATGGTTATTGTAAATTGGGCAATAAGAAAGAAGCGACTAAGCTTTTAAATGAGATGATAACAAAA GGAATAGAGCCCGATACCATCACATATAATGCATTGCAAAAAGTATATTGCAAAGAAAGGGAGCTAGAAGAAGCTATTCA AAGTGATCATATGCCTAATACTGGAGTGTCGTTAGAAGAAATTACGTATACCACATTGGCTGACAAGTTGCATCCACATG ATGTACTTAGCAATCAGGAATGAGGAAATACTCAAAGTTTTGACACTTGGTTGATACCAGGACTGTTTTGGTTGAGAATG TGTAGTTAAGCTTAATTTTAAGCTAACTATTTGGAATATGAAGGTTTCATATGCTTGATCTCTGGACATGTGGACTACCG GCAACAGCTAAAGCATTGTACTTTGGACTGGGCTTCTTAATTGAAAAATGAGCCTTCGATTTCAAAGGTTAGTCATTTAA GACTAAATTGTTTATATTTAAGCTTTGCATTGTATTTTTTTTCTGCTTTTTGTTTTGTTCTGATTTTAGTCTTAAGAAAA CAAATTGATAATGGTATTACTGTATGACGGGTGTGTGATGGATTTATTCCACATTAAAATATTTTCATTTGGTCTTCTAA TTGATGCAGAATGAATAGCGTTATGTGAGTTACTTTAGGGTTAGTTATGTTATTTCTATTTTTGGTAATTTGGGGATTCT ATCATATTTTTATCAAGGCATTGATTTTAGGAATTGTGTTTAATTAGGATTAGGCCACGGTTTTGACCACCCTTAAATAC CCCTTAAAGTACCCCTTTAAGTACCCTATGTTATTCATGCTTTTGATGTAGAATAATTGAAGTGATTAATGTGTGTTAAT CCAAAGCATTCTTGGCTCTTTATCATCAATACTTTCGGATGAGGTTTCAATTGTGTTCACCATCATGCTTCTGGATAGTA GAACCTTATCCATTTTCTTTTACATCTTTTCTTAATATTAAGGGTGTGTTTCTGATTTTTGTGGGGAGGGGAGTGGAAGG CCTTGACGGGAAGGGGAGGGGAGGGCAAGGGAGGGGGAAGGAGGGTAAGTCCTTCTCTTGTTTGGGAGTCCAAAACCCCC AAATTGGGGGAAATAGAAAATATAACTAAGAGATGGTCTTAGGGGGGGCTATTGGAGGGTATTCAAAAATTCCCCAATGG AAAACTTAGAGGGAATGAAGAGAAAGTGTTAGTTAGCTCAGAATGAATTGATTCACTTACTGATCAGAGTGATGGCTTAG TAGCTTACACATATATACCCCGGGGACTAATCTTGTAGACTGTAGATGCTTAACTACTAACAGTTACAACAAACTTTTAA CAGTCTCAGACTCTCAAATGCTTTAACAGTCTTGTCCTAACTACCATAACTAACAATTAACACATTTTCCCTTACATCCC TTGGCAAACTGAAGGTGGCTGAACCCAGAGTTTGAGAATACCCTTTTCAAAGCTGACTGAGGGAATATGATAAATAGCCA AGTAAATTACAAACTCAGTATAAATCTATTCAAAGTGTTTGGTACAAAAGTTAAAGAGGCCTGTTTTGAGATAGTAGGAG AGGAAATTCTTTGTATTATATGGATTACTGTTGGAACGTCTCACCTTAAAATAGGAGAGGCATAGATGCATTGACTAATA AAGTTAAACCCATTTCAGCGATGTGTCTATGTTTCCTTTTAGAAGCGCCATTTTATTGGTAAACGTCCTGGGTATAAGGA CAACTAAATCTATGGATGGTACCTTGTGTTTGTTGGTACTTAGTTCATGGCAGGTAATCTTTAACCCCCATCAGACTTAA GTGCTTTGAATATGGTACCAAGTTGATGTTCAAATAGAACCTTAAAGTTTAAAAAACTAATGAAGGCTTGTTATATGGTT TGGAGCTGGTAAGTCCAAGCGTACTTTGAGTATGCCTAAATGAAATGTACATAGTTTTTACAGCTATTGATTGATTGTTT GACATGGTTCTCAAATGTCTTATTATATCATTTAAGGGGCTTAGAATACACAGTTGAAGAGTCATAACATAATGTTTATG TGAGTTTCCAAGACAGTCAGAACCACAAACGAAAATCATTTTATTTACATGAAAACATTACATTTTTTCAATACAAGATT GACAGTTTTTGCTGAGGAAGTGCCATTTTCTATAGAAAGCATCTTCGTTCAAAGTACATGTACTAGGGACTTTATTACAA ATTTGATCAGTGTTGAAACTAAGAGGCCCATATCGGATACATTGGAGGGACAATAAGGGTATATAAGTGATGTTGTTACT AGTCCAAAATGTCTTGAGGCATTTTTGGACCACACCCACAACTAAGCCCAACACACTCACTTGAACCTACAGGTATAAAG CTGAAACTGCATAAAGTTGGGATGCATTCTATGCATGAAGAATGCTTCAATGTATTTCTCGCGCCTTTCGAATCTCTCTT CTTAACACATTTGGAGTGCTTGAATTTCTGCTACTGAGTACCGCTCAGAACGTGATAAGTCTGGGTTCGTAAAAGTATGA TATTCTTTAGGAAGTCTATCAAATACAACTTGAATTTGATCCTCTGCATCTACAGAAGCTCCTACTTCTGCTAGTAGATA TACTATTTTCTTGATTGATATCATATACTCAGATATTACTTGTTTTGTCCACATTCCTCAGCTAAACTTTCAGTTCCTTG GTCTTCGATCTTGTTTGAGAAACAAAGAAAACTTTCAGTTTCTTCAAAATTTGGAAAGAAAAAACATGTCCTACCATCCT TGTTGTGAGGATTTCTGACATTAACTGATCTTGCTACCTCCAGTTGATGCATTCTTTGCTGATCTTGTTTCTTGCTTCAT CTTCACAGGTTTGATGTTTGGGTGATATGCCACCATATTCTTCAATGAATTTCTCTTGCATGTGGCCTCGAATTGTTGTC AAGGCTTGATGCTTCTAAGTGAGAAAGTTGTGTTCGTCCAGCTTGGTGGAGACTGGACAGCTTGGTGGAGACTGGATTTG AAAATGCTTGAGCCACTCTGCTGTACTCAGAGAGTGAGATGAGCTCACAATGTCTGCCATAAGAGGATTGTAGCTCTAAT ACCATGAAGGTATGAACGCTGCAATGGAATACTTAGAAAGAAGGCAGAGAAAGTGTTGCACTCTAGAATTAACTCGTAAT GAATTGATTGCCTTATCAGAGGCTTACACATGTATACACGAAGGACTCATACTATAGAGGCTTACCTAACTTGTAACAGT CACAACAAACTTATAACAGTCTCATCTTTACTACAAACTAACTACTAGCACAGTTACCCTTACAACGGACTTTGGCATGT GATAGGTGTGTCAGAAGGTCGAGCAGATTCTTGTTGTTAGATTTAAAGGCAGAATGCTCTTACATTTAAGGTTGTGTTTC TGCCCTCAGTGTGCTGCAGAATAGATAAGATGATGTTTCTGGCCCCCCTGTGGTTTTCTGGTAATGTGTGTTTCAAAGGG ATCACACATTTCATATATGGATAGAGATTGGGCAGATTCACTGCATTCTTTGATCTTTTCGGGTTATCTGGGTAATTTAC TTTTTCTGTTTGGGAGGACTTATCCTTCTATAGCTGTACTTCCTCCCCTTTTTCTTATATAAAATTTCTTTCAATGTCTA AAAGAAAAATTGTTAACAAGTCCTGCATATTGTTATTCCATAATTTTTTATTAATTTTTGATAATAAGATTTATGTACTA TTTGATTTTTATTTGTTGGTTGTGTAATGGATATTTGTTGTCAAAGCCGGGATTTAGTTTCCTTGTGCCAGGTTAATGCC TGTATACAAATTATCATATTGGTTGGACTTGATTTCTAATTCCTACGGTTTATAGATTTATAGGTGTTTATCTGGTGACC AACTCAAGCCAGTTCCAAACCTACTCAAGCAGACATGATTTGAACAAAGAAGTGTGATATATAGTCAAGCATCAATATTG TTATCACCTTCTTTTCCACTTTTGTCTGGTGAGGGTCTCATTTATGGATAATTTTCCTCATATATGTGTCAAATCAGTGC GCTATGTGCCTTTTATGTGCGTATACACTGAATTTTGCTCTGGCTTCCAGGAACCTCTATTGTATGGGCTCAGCTCACTG CATGGATGGCGGAGCTCTTGGATGTTGGAGATAGCATTAAAGATTTGAGGAACTACCTAGTATATCTATAGTAAACATGG CGCATTTATTAGATCCTCATCAAAAAGAGAATTGCTTTTTGGTTAAAGCAGAAGGCACACAATGTTGAATCTCTGCAATG GTAATAAATCCTTAATTTTAACCATAGTATTATCTGCTTTGTTGTTCTTCCAACATCCACCCCCAAAAGTCCCTAAGTTT ATAAAAATAATAAGAAATTTGATAAATAGATATGTGTCTTCACCAAAAGGTTGTGTGTCATTTAGGGACAGAGGGGAGAA CTTATTGTAGCAAAAGCTATACAACAATCCAGAGACTATTTGAAAAATATGGAAGACAAATGGATAAACTTTCTGGCTTG AATGTGGACAATTTATTTTCCTCCCTTTGATCTTTAGTGCTGTTTTATGCTTGACGCTATGTTAAATTCTTGATAATTTC TTCAGGTATGTGCTGGTGGCAAAAGAGCTTGGTAATTCGAAGCTTTCACGACGGCTTGCATTAAAGGAGCATTTGATCTT TTTGACAAGTAGTTACAGGGCAGAAGTGATTCAGAATATAGGCTCTGGATATAGTTTAAAGGTAAAAAAGTTATTGAATT TAATATACAAGCTGGCCAATGATCTTTATTTTCCTGTCTTCATTGTCTCCATCTTGGACCTTTTGAAAGACGAGAGAAGA TAGAAGGAAAGGCAGAAGCACTGGTGGAAAGATGAAAGGGGAAGGGGCATTTCCATCTGGGCTGTGCATATGCAATCAAA TCCCTTCAAATATACTACATGGTTCCTTATTTCAATACTGCTGATTTCAAGGAGGAAAAAACTTGTTCTCTGTATCATGG TTATTTGGTTTTCTATATATTTTTTCCAACATCAAAAGCCTTTTAGAATTTATTGTTGAATTTTAAAATGCGTACACGTC ATTATTTGAACGGAAAACTTAATTTGGATGTAAGAAAATTGATATAAGTTGTCTTTTAAAGAAAATATGCTGA
CDS sequence (LotjaGi4g1v0144100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTCTCCGCCACCATGGATTTCACAAGGATCTTAACCACTAAACCTCCCCCTTTCTTCACTCGCCCCGTCACCTGGAT CACCTCCACCACCGCCAACCACCTCAACTTCCCTCTACCGCCGCCACCTCCGCCGCCAGGCCCCAACCACGCTCCTCCAC TCTCCCTACCTTCTATCCTCACAAGCAAAGTTCTAGATTCTTCCAAATGCAAGTCGATTTTACCCCATTTATCCCCTCAC GAATTCGACCGGTTATTCCTCTCTCTCCACCCCACCGTCAACCTCAAAACCACGCTCGAGTTCTTCCGTTTTGCCGCCAC GCGGTTCAAGTTCCCCTTCACGGTTCGTTCTTATTGTCTCTTGATTCGTTTGCTCCTGGCTTCGAATCTTTTACCTCGAG CCAGGTCGATGTTAACCCGTTTGATCGATGGTAACGTGGTTACGCCGATTGGGAACCTTGATGATAGGCTCCGTGAAATC GCGTCTTCAATGCTGGAGCTGAACCGCGTCACGGGGCGAAAGCACGGTGAGCTGGATTTGTTGCTTCACGTTCTGTGTTC GCAGTTTAAGCATTTGAGTGTTCACTGGGCATTTGATATATTCACCACGTTTACCAATAGTGGCATCTTTCCGTCGCTGA AAAGTTGTAATTTTCTGTTGGGCTCTCTGGTGAAGGCTAATGAGCTTGAGAAGAGTTATCAGGTGTTTGACGCGGCTTGT CTCGGTGTTTCCCCTGATGTTTACACGTTCAGCACCGCGATTAACGCGTTTTGTAAAGGTGGGAGGGTTGATGATGCTGT TGCTTTGTTCTTCAAAATGGAGGAGCAGGGTGTTTCGGCTAATGTTGTTACGTACAATAATGTGATTGATGGGTTATGCA AGAGTGGAAGGTTAGAAGAAGCCTTTCGGTTTAAGGATAAGATGGTGAAGAACAGAGTGAAACCGAGTGTCGTTACTTAT GGGGCTCTTATTAATGGTTTGATGAAGAAGGAGAGATTTGATGAGGAAAATTCGGTTTTGTTTGAAATGTATAGCAAAGG GGTTGCTCCTAATGAGGTTGTTTTTAATGCACTGATTGATGGGTACTGCAGAAAGGGGCATATGGTTGAGGCATTGAGGA TCAGGGATGATATGTTGTTGAAGGGTGTGAGACCCAATGCTGTTACTTTTAATACTCTTTTACAAGGATTTTGCAGGAGC AATCAAATGGAGCAAGCGGAGCAAGTGTTGCGATACTTGTTGTCAAGTGGGATGTCCATTAACCAGGATGCATGTTCTTA TGTGATTCATTTGCTATGCAAGAATTCCAGGTTCGATTCAGCCTTGAAAATTGTTAAGGGATTGTTGTCGAGGAACATTA AGGCTGGTGATAGCTTGCTAACTGTGTTGGTTTCTGGACTTTGTAAATGTGGTAAACATCTGGAAGCCATTGAGCTTTGG TTTAGTCTAGCAGATAAAGGGCTTGCAGCCAATACAGTGACCTCAAATGCTCTTCTCGATGGTCTTTGCGAACGTGGGAA CATGGAGGAGGTTTCTGCAGTACTCAAGAAAATGCTTGAGAGAGATTTTTTACTGGATATGATCTCATACAACACACTTA TTTTTGGCTGTTGTAAATCGGGCAGAATCGAGGAAGCTTTTAAGCTTAAGGAGGAGATGGTTAAGCAAGAATTCCAACCT GATATTTATACCTACAATTTCCTGATGAAAGGATTAGCGGATATGGGAAAAATAGATGATGTGAATAAGCTTTTGAATGA AGTTGTAGAACATGGTCTGGTTCCAAATGTCTATACATATGCACTTTTGTTAGAAGGATATTGTAAGGTTGATCGGCCTG AAGATGCTATGAACTTATTCAACAAGTTAGTTGATGAGGACGTAGAGCTAACTTCTGTTATTTATAACATACTTATTGCA GCTTATTGTAGAATTGGGAATGTGATGAAAGCTTTTGAAATCCGTGATGCTATGAATAGTAGGGGCATTCTACCAACATG TGCCACATATTCTTCTTTAATACATGGAATGTGTTGTCTTGGCCGTGTAGATGAGGCAAAGGAAATTTTTGAAGATATGA GAAATGAAGGATTGTTGCCAAATGTATTTTGTTATACTGCTCTAATTGGTGGTTACTGTAAGTTAGGTCAGATGGATGAA GCTGAGAATATCTTACTGTTAATGTCTTCAAACAGTATACAACCTAATAAAATTACCTACACTATTATGATTGATGGTTA TTGTAAATTGGGCAATAAGAAAGAAGCGACTAAGCTTTTAAATGAGATGATAACAAAAGGAATAGAGCCCGATACCATCA CATATAATGCATTGCAAAAAGTATATTGCAAAGAAAGGGAGCTAGAAGAAGCTATTCAAAGTGATCATATGCCTAATACT GGAGTGTCGTTAGAAGAAATTACGTATACCACATTGGCTGACAAGTTGCATCCACATGATGTACTTAGCAATCAGGAATG A
Protein sequence (LotjaGi4g1v0144100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLSATMDFTRILTTKPPPFFTRPVTWITSTTANHLNFPLPPPPPPPGPNHAPPLSLPSILTSKVLDSSKCKSILPHLSPH EFDRLFLSLHPTVNLKTTLEFFRFAATRFKFPFTVRSYCLLIRLLLASNLLPRARSMLTRLIDGNVVTPIGNLDDRLREI ASSMLELNRVTGRKHGELDLLLHVLCSQFKHLSVHWAFDIFTTFTNSGIFPSLKSCNFLLGSLVKANELEKSYQVFDAAC LGVSPDVYTFSTAINAFCKGGRVDDAVALFFKMEEQGVSANVVTYNNVIDGLCKSGRLEEAFRFKDKMVKNRVKPSVVTY GALINGLMKKERFDEENSVLFEMYSKGVAPNEVVFNALIDGYCRKGHMVEALRIRDDMLLKGVRPNAVTFNTLLQGFCRS NQMEQAEQVLRYLLSSGMSINQDACSYVIHLLCKNSRFDSALKIVKGLLSRNIKAGDSLLTVLVSGLCKCGKHLEAIELW FSLADKGLAANTVTSNALLDGLCERGNMEEVSAVLKKMLERDFLLDMISYNTLIFGCCKSGRIEEAFKLKEEMVKQEFQP DIYTYNFLMKGLADMGKIDDVNKLLNEVVEHGLVPNVYTYALLLEGYCKVDRPEDAMNLFNKLVDEDVELTSVIYNILIA AYCRIGNVMKAFEIRDAMNSRGILPTCATYSSLIHGMCCLGRVDEAKEIFEDMRNEGLLPNVFCYTALIGGYCKLGQMDE AENILLLMSSNSIQPNKITYTIMIDGYCKLGNKKEATKLLNEMITKGIEPDTITYNALQKVYCKERELEEAIQSDHMPNT GVSLEEITYTTLADKLHPHDVLSNQE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 114 | 148 | 35 | 5.974 | ||
| PANTHER | 179 | 319 | 141 | 3.6E-163 | – | |
| PANTHER | 179 | 319 | 141 | 3.6E-163 | – | |
| PANTHER | 194 | 519 | 326 | 3.6E-163 | – | |
| PANTHER | 194 | 519 | 326 | 3.6E-163 | – | |
| ProSiteProfiles | 212 | 242 | 31 | 5.229 | ||
| Gene3D | 212 | 335 | 124 | 1.0E-36 | ||
| Pfam | 242 | 274 | 33 | 1.2E-11 | ||
| ProSiteProfiles | 246 | 280 | 35 | 12.342 | ||
| TIGRFAM | 248 | 281 | 34 | 2.3E-8 | ||
| Pfam | 281 | 329 | 49 | 1.6E-17 | ||
| ProSiteProfiles | 281 | 315 | 35 | 13.57 | ||
| TIGRFAM | 283 | 317 | 35 | 2.7E-9 | ||
| ProSiteProfiles | 316 | 350 | 35 | 10.556 | ||
| TIGRFAM | 318 | 352 | 35 | 6.2E-4 | ||
| Gene3D | 336 | 460 | 125 | 9.4E-31 | ||
| Pfam | 350 | 399 | 50 | 1.6E-17 | ||
| ProSiteProfiles | 351 | 385 | 35 | 12.934 | ||
| TIGRFAM | 353 | 387 | 35 | 1.6E-8 | ||
| ProSiteProfiles | 386 | 420 | 35 | 11.564 | ||
| TIGRFAM | 388 | 421 | 34 | 3.2E-6 | ||
| ProSiteProfiles | 421 | 455 | 35 | 8.309 | ||
| Pfam | 426 | 453 | 28 | 0.93 | ||
| ProSiteProfiles | 456 | 490 | 35 | 8.276 | ||
| Pfam | 461 | 487 | 27 | 0.0051 | ||
| Gene3D | 461 | 586 | 126 | 9.1E-35 | ||
| ProSiteProfiles | 491 | 525 | 35 | 10.512 | ||
| Pfam | 493 | 522 | 30 | 7.8E-5 | ||
| TIGRFAM | 496 | 526 | 31 | 1.1E-5 | ||
| PANTHER | 497 | 643 | 147 | 3.6E-163 | – | |
| PANTHER | 497 | 643 | 147 | 3.6E-163 | – | |
| Pfam | 526 | 573 | 48 | 1.8E-16 | ||
| ProSiteProfiles | 526 | 560 | 35 | 13.493 | ||
| TIGRFAM | 528 | 562 | 35 | 5.3E-10 | ||
| SUPERFAMILY | 537 | 769 | 233 | 1.78E-7 | – | |
| ProSiteProfiles | 561 | 595 | 35 | 11.751 | ||
| TIGRFAM | 563 | 597 | 35 | 1.5E-5 | ||
| Gene3D | 587 | 730 | 144 | 3.4E-42 | ||
| Pfam | 592 | 622 | 31 | 1.1E-7 | ||
| ProSiteProfiles | 596 | 630 | 35 | 11.06 | ||
| TIGRFAM | 598 | 631 | 34 | 2.3E-5 | ||
| PANTHER | 606 | 724 | 119 | 3.6E-163 | – | |
| PANTHER | 606 | 724 | 119 | 3.6E-163 | – | |
| ProSiteProfiles | 631 | 665 | 35 | 11.729 | ||
| Pfam | 632 | 678 | 47 | 2.5E-13 | ||
| TIGRFAM | 633 | 667 | 35 | 4.0E-7 | ||
| ProSiteProfiles | 666 | 700 | 35 | 12.825 | ||
| TIGRFAM | 669 | 702 | 34 | 5.4E-10 | ||
| PANTHER | 681 | 812 | 132 | 3.6E-163 | – | |
| PANTHER | 681 | 812 | 132 | 3.6E-163 | – | |
| Pfam | 700 | 749 | 50 | 1.2E-16 | ||
| ProSiteProfiles | 701 | 735 | 35 | 11.937 | ||
| TIGRFAM | 703 | 736 | 34 | 4.6E-8 | ||
| Gene3D | 731 | 824 | 94 | 1.1E-22 | ||
| ProSiteProfiles | 736 | 770 | 35 | 13.592 | ||
| TIGRFAM | 738 | 772 | 35 | 2.7E-10 | ||
| Pfam | 766 | 793 | 28 | 1.5E-5 | ||
| ProSiteProfiles | 771 | 804 | 34 | 7.761 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0144100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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