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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0150600 |
| Transcript ID | LotjaGi4g1v0150600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transcription factor GTE1; TAIR: AT2G34900.1 Transcription factor GTE6; Swiss-Prot: sp|Q84XV2|GTE1_ARATH Transcription factor GTE1; TrEMBL-Plants: tr|A0A0S3R458|A0A0S3R458_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0150600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:24815911..24824426) extracted from Lotus japonicus Gifu genome v1.2.
CCTTTCCTTAAAAAAAAAGACCCAAAATCCAAAAGAACACAACACCGCTTTTTTCTGAAGCGTAAAATCACAGCACTCTC TAACTTGTTCGGTCCTGATGGATCTAACCTCTACTGCTCAGGTTGATGATTTGGAGGGTATTAAGCGTTCTGTTGATGAA TTTCTTAACAGAGTTGACAAGGTAAACTCGATTTCAAGATATGATCGTTTCGAAACAATTCGAAATTTACAGTTTTCAGC ATTTTAGTTGGTGCTCGTTAGAACCAAACTACACACTTTCTACCTCAGAAAATTGTCTAAAATTTATCATTTTTTTTTAA ATTTTAGTTTGGGAGATTTCTGAGTTGATTTTAGGGGCTCAAAAGAATTAAGTCACAGATTGACTAGAGATATGACATCC TTATAAAGGGTTGTGCAACCCTCACCCCTAAGTTAGCTTTTGAGATAGAGTTAGATCTAACTCGAATCTTAATATGGTGG CAGAGCCAACCCTAGATCCGTTTATTGGAGAAACCCATATTTGAGCTACCAGGAAGATGTTCATTCCTACAAATTCTACG CTCTGGATGTACAGCCCTGAGCATGAAAGGGTGTGTTGAGAAGTCTCACATTGACTAGAGATATGATATGACCAAAACCG TTCTAAAGGGTAGAGCAAACCTGACCCGTAAACTAGCTTTTTGGGTAGAGTTAGGCCTAACCTGAATCTTAATATTCTGG TCTAGATTTTCTTGCGAATGTTAGAGTATTAGCTATAGTTGGGTAATCCGTAATCCTTCATTCTTGCTTAGCTCGCCAAC AAACGCACTTGTTCTACAAATAAGATGCAACCATGTTTGCATAAAGCGTAGTTTCTATCAATCACTTGTAGTTTCAAGAT AGTCAACTATCAGATATAACACTGGGTATCGGATACGTCACACACTTTTCATACAATTAGGATACAGGTATTGTATATGA AAAATACATTTCTCATACAATTAGGATACAGGTACAGCAGGATATTATAAAACACACACACACACACACACACATATATA TATATATATATATATATATAAATAGAATGTATCAATACATCATCTGGGTATGATTATATAAGTTTCAAATTGTAAACTCT TAAGTTAAAGAATCTTGTATTGCCATGTACAGATTGAGAAGCAAGTGGTCGAGGTTGAACAGTACTATGAATCTGCCGGT AATGTTCAAGGTGATAATTCTAAAGGAGGCTCAGTTGTAAAAGAGAAGGGCAGGGAGAAGCATCTCATTGAAACGAAAAA GCCGCTGCAAGATGCATCTGATGTGGAAACTTCTGCTGCAAGGGGAATGCAGGAGCTAATGCGCCAGTTTTCCACAATAT TGCGTCAGGCAAGTGCAAATACTTTGTGACGATGCACTTTCTCCCGAGTCTTCTTTTATTTGGATTTGATTTTGTTAAAA TCAGTAACTGGACTTATGGTTTCTGCAGTTGTAGAAAATAAATTTTACATTTGATGATATTTGGATATTATTTAGTTAAA ATCAGTAACTGGACTTGTGGTTTCTGTAGTTGTAGAAATATTTTTACATTTGATGATCTGGCAAAATTAATTTTCTTTTG AGCTTACCTTTTGGAAGGAACTTACCATTTTCAATATCTCAAAGCTGCAAGTTATGTGGGAACTCAATTTTCTTACTGCC AATAAACTTATTTGTCTGATTCCTACTTATCAGGATTTCCTATTTGTCTGTTTAGTGTCAATATTACACCCTTTGCCTTC CCTTCAACTTTTATCTGACTATTTACTTTTTCCGCTCTTCTTCCAATTGTTTAGATCTATGCTCTTATTGACTTTAGCCT TGTTGAAATTTGGCTTTTGGTAGAGCACAATGGATTTGATTGATTCATGTATCTAACTCAAGGCTTGGTTGTTGTTGCTA TCACTCATGTCATAGCATCTTTGGTTCCTCCGGAAACTCCCATAATCACTTATGGGGTGAAGCTACAAACTATAGCTTCT GGGTACCGTGCTTTGGATTGTATGTGCTGGCCACCCATCCAAACACACTATTAATTTAGGCTAAGATTGTCAAACTTGCG AGGTTTATGAAAACTCGCTGGAACCGCTATAACTCATATGCTTATACAAGTTACCAATTTAATAATAAATCGTAGTATCC AAACAAAATCTAATATCATGTCCATCATTAACTTTCAACAGTCATAGTAAAACAAAGAAATGTCATAACTGTGACCATAC AAATTAAAAAATGAAATGAATAAAGAAATTATAAGTTCATCATGCTTAAAATTAGAATAACTTGAGCCAAGATCATTGAA ATTCGACACCTCTGTCATCAATTCATAAGGGCCTTCATCAAGTCATAAGGACCAAATCACACCAGCAATGGTAGATCAGA AGCAAACGTAGTTGCAGAGTGCTGGTCCTGTTGAAGAATGACCATAAAGAGGAACCTGAAATACAGTAGAGCCAGACAGG GTTCTAAATTGTGGACCACATCGCCTGATGTGGCCACAATATTGCGGTTGCGATGCCCTCCGCATTCGCATCACACTGCA GTTGTGGTGTGAATTGAAATCACACGAAATAGCTGTTACGAAACCGTAATTTCACCGCAACACTTACCCAACCAGCCGTT CTGGCCAGTGCAGGGTTCTGGTGGCTGCAACGACGAAGTGCCAGCCGCTGCCACTGGCATTCTGAAGATGTCAAGCCATA GAAATGGTGCTTCATCATTTGTGGATCAATGGTGTGGTTTGCATCATTGCATGTCTCTGTTTTGTGTTTAATCTTCTGTG TCGGTGGGATTGAGGAACCAGGAACAACATTTTTGTGTCTGCGTTCTTTTGGGATGGGTGAGAGAAATTAAAGTACGCAT GTGAGTGTGTAACTGATGAGTAATGAGTTGGAAATTAGTTTAATAAAAAGGGATTTGGAAAATTATTTTCATTTGATGTA TGGGAATGAATTTGGAAAATTATTTTCATTCATTGTATTTAATGTTAGGATTTGGATTTACTGTTTAATTGGGGAAGAGA ATATAATTTTTCTTGAGATTATCATGGGAGGGAATGGGATCAGTTGGAGAGGCCAGAATAGATCAAAATGATACAAAATT AATGGAGGGAATGCAAAATAGTTTTAAGGTAAGAATAAGGCAGGTAAAATATAGAGAGGATTTTAAAAGGAAAAATAGAA GATGATGAAAACCTAATTAGAGGTAATTAGATGTTTAATTTTGGAGAGAATTTTCAATATATTAACTTTCTTATTTCTTT ATTAAATTTATTTTAAATGATTAAGTAGAGTGATACAAGGTCTTAAAAAATTAATTAAAATCTATGCGATATTTTGCATA AAAGGTATAGGAATAATTACAATAGTTATAGAATTTTTTTACACACACTACACATGTAATACAAATTCACGCCGCAACAC GCATCACAGTGACCACCATGTCCGCAACCGCAGTGACTGCAACTGCAATTTAAATCCCTGGAGCCAGGTATGGAAGTGGC AGAGCAAGAACCATGATGATTAGCGTCACAACAATAACATGGAAGAGCCTGATGATGAGTGCAGCCGGTGACAGAGCAGT TCAAATTGGAGGAACGCAGCCGAGCTTGACAATGATGCATCTTAAGAATCTAGAGAGAGAGAGAGGCTAGAGAGTGAAGT AGAGAGATAATTTGCTTTTGCTTTTGAATTTGTCTCTGTTAATGTTATTATGGTTCAATATTTGACACATGTGAGTATAT ACAGCCTGACTAGGTGGCGGTGGTTTAAATATTTTCAAGTAGCTTATATGTCACAATCTTATAAGGCTAAGGCTAATCCT ACCTCTGTAGGATGGATAAAATTATTCATCATTTTAACGCACAAGAGTGAATTGATCGATAAGCATATACAATACCATGT TAGCAGTTATCACCAAACAATGGTTAAACTCATAATGGATTGTATAAACTTATACAATCATGCATAATACGGCGTACCAA ATGAGCCCTAACAGAATCCTATCCACTGCTAACAACTTTAAGCCTTTAACTAACTTCTAACAGCTACATATTGATATTAA TTTTACACTAAAATTCAAAATTAGGGATTTTCAGACAAATTAGCCAGTTATTTATGAAAAACTATGTGACCTTAAAATGG AAGGATGAGGAACTATGTGGCCTTAAAGTGGAAGGATGAAAAACTATGTGCATTGTTTTGATTTTACAATTAGTTTTTCT AGCTTTTAAAAGAGTGAGTGTTAGCTCTTCGAATGCTGGTAATCATTTAGCTTTATCTTTTACTCTTTTTTTGTATGACT AAGACTAAGTTATTCGACAATTGGATGTGTCCTACCTTTTAGCAAAAAGTTCATTATTTATGCTCATCTGCAGTGTCTAG TTTTTATGTCATTATCCACATTGCAGACTTGCCTAGTGGGAATTTATATTTTTTTTGAGATCAACTTTTCTTTTCCAATT TCCATTGTTTAAGTAAAATGCACTCTTCCCATTTTCTGTTGAATATATTAACCCTATTATGTTTCCTGTGAAAAATTAAT GGTGACATATTTGACGCGTCTCAGATTACTCAGCATAAATGGGCTTGGCCTTTTCTGGAACCTGTAGATGTAAAAGGTCT TGAGCTTGACGACTATTATGAGGTAACGCTTTTCTTCATTTTAAAGCTTTCCTCTTGGTCTAGGCTATAGTTATAATATC CAAGTATGCTTGAACAAACTTCATTTAAAAAAGGTTTAAATATTTGTTTGGTCTGTGTTTTTGCAAGTAATGAACTGGTT TCCCTTGTTGACTATGTATCTTTCATGAAAGTTATTTGTTTGCTATTTGTTTTTTATTGTATTTCTTCTCTAAGATTTTT TTTAATTTCTATCCCTAGGTTATTGATAAGCCCATGGATTTCAGTACAATAAAAAGTAAAATGGAAGCTGAGGATGGAAC TGGATATAAGAATGTACGGGAGATATACGCAGATGTAAGGTTGATATTTAAGAATGCAATGAAATACAACAATGAAAAAC ATGATGTTCATGTGATGGCAAAGACCTTGCTAGAAAAATTTGAGGAAAAATGGCTGCAACTCTTACCTAAAGTTGCTGAG GAGGTAATTGATTCCATAATAGTTACTTTTTTTGGAAAATGAAGCTTTCTTATAGTGTTAGAATATAAGTTACAACTTAC AAGTACACATGACATGACCACAAAACCCTAAGCTTAAGGCAATGGGTGTGTGTATTCTTTATTATATATACATTTGTATA CTAGCTAATCTACTCAATGTGGGACTTCTTTGAGTCTCCACTTGGTATTCTCTAATATACAGATATGTTAAAAACTGCTT GCATAGCTCATGTTAGGGTTCTAAATTATAGTCAGTGCGCCTGTTGTGTTTTGGCTGATGTTTAATTTTATCTATCTCTA TTAGTTAATTTTAGTACAGTTTAGTATTGAGTCTGCTTTTATTATTTGAGTTGGGCCTATGTTGGGCCAGAGTCATTTGC TCAGTAGGGTTAATTTATAATAAATTACCGTACACTCTTAGGTTAAAGTATGATTTGAGTATTAGATTTGTGAAAGGGTT TCACACTTTCACCCTTGGAAGAGATTCTCCCTTGAAAGAAGGTTCACCTCATGTTAATCCATTAGGATTGTTTTCCGCAT CCTTCTCTATTCTTGTTTATTTTCCAGTTTTAAATATTCAAAAATACCAAATATTATTCCTTCCCTCCTTTTACCTTGTG GCTGCTGTTAGGTAGTAGGTGGGATATAAGAGTTTGACAACCTTGCTTGCACATGCCAAGAGACTAGGTAGCTTTGTTTC ATTGAATTTTTTTTTCTTTTTAAGGAGTATCTTTTATTGTCATATCTCTCTGGATTCTTCCTCTGTTTATCTTAATGAAA TTAACAAACGAAAAATCTTATATATGGTTTTTGAAGGCCACACCTGCAGTGACAAACAATCATGAGTCATCCTATGTGGT GTATTACCTTTCTATATTTTATCATGGTAGGAAAAGAGACTGTTAGAGGAAGAAGCACTGGCTCAACTAGACATTCAGCT TGCTCAGGAGAAGACTTATGCCAATTTGGCTAGGGATTTAAGCGTTGAGGTTGGTTATTGCTTGCTAGAATTGCTTTTCT GTGCAGATCCTTTCCTTGATGTCACTTGGGAGTAAAACAGATGGTTTATGCTGTCAATTCCTGTTTTTCAGCTTTATCAG GTTGATATGAAATTGAAGGATCTCAAAGAAATGGTGATTCAGAAATGCAGGTTTGTGAGAAAAAATTATTCATCATCTTT CCTTGTCACTGAGATCAAATTTGTGTGGAGATTTGTTACTGTGTCTACTTCTGGTGTCCTATCTATTGAGGTTTAATTTT TATTTAAGTCTCGGCGTGTAATGATATTTTGATATCAAATACAATAGTTGCTTATGTTTATGAAAAATTACCGGTCTCTC TCCAGTAAGGTTTGTTTAAAATTTATGCATGTTTTTATTGAAAGTTGATTCAATAACAAAAGGAAAATGATTACTTTTTT TTCTCATTTCTCTCTTTCTCCGTCTCCCTCTTGTTGTCTATAGTGGTCCTACCCAGTCCAAACATAATTAATCCTGTGAT TCAAACCAAAAAAAGAGGAAAATGATAACAAACGTCGTATTTCAAATAGTGCTATCGCAGTTTGGTGATATAATTCTGTT GCCTTCGTATATATTCTGTCATATAGTTTTTACCAAAAATTAACTATGAAAGTTATATCATCAGTAGTTTGATGAAGCTT TATCCCAACTTATTAACAATGGCACTGTTTGGAACTGTTCAAAGCTAAATTTGCAAGGAAATGTGAAAATGGCAATATTT TTTTTATCATGGTATTTCTTTTTTGTCAGGCCTGTGATTTGTGTAGATTATCCATATTTTGCATTGCTGACTGATGCTGA CAATACTGTAGGAAACTGTCTCCTCAAGAGAAGAGAATACTTGGGTCAGCTCTCACCAAGTTGTCTCATCAAAACCTCAA CAGGGCATTGGAGATAGTTGCTGAGAATAACCCAATCTTCCAATCTAGTGGTGAAGAGGTGGACCTTGACATTGATGCTC AGGTCTGTAATTATAGTAGTTATGTGGTTAATACTTTTCACTGGCATCCATTATTAGAATTTGGAAGGCCTAACAGTACC CCAAAAGTTAGCTTAGAGGTGAGCATTGCTCTAGTTGGCTATTTCTCTAGTCAATGTGGGACTTCTAACATACCCTCGTC ACGCGCAGGCCTTGACACATGGAGTGTGAAATATGCAGGAATGAACATTTGAGGGTAGCATATTCGAGTGGTCTACACTT AATGGATCTAGGATAGACTCTGATACCATATTAGAATTTTGGAGGCCTAACTCTGATAGTTATACTGGTGCTCCCTATGA ATATAGTTTTGGCTTATCAATAAAAAACTCTACCCCTACCCCTGAAGAATATGGTATCAGAGCATATCCTAGATCCATTT GTAGGAGACCTCTAATATACGGGCCACCCGATGATGTTCAGTCTTGGGCGTGAGAGAGTAGGTTAGAAGTCTCACATTGA CTAGAGATATAATCCATATCAAGGTTGAGCAACCTTCATCTCTAAGTTAGCTTTTGAGGTAGAGTTAGGTCTCTCATTGT CTAACTTCATCCATGCTATCCTATCCAATTAATTTTCTTGTTTAGCTTGTTTCAAGCTGCTCATTGTGCTTACCATTATA CGCAGAGCGACTACACACTATGGAGGTTAAAGGTTTTTGTAAAAGATGCACTAGAAGCTCAAGGAAAGGTTGCTGGGGGT GTAGCTGTTAATGATAACCTTGACAACAAGAAAAACAACTCCAAAAGGAGGAGAGAATTAATTGATTCTCTTGCCAATAC AAATATAAAAAAGACTAGGAAACTATCCACTTTATGATTGAACTGAAGTTAGGAACGGTCGTAATAGAGACTAGCGTAGG GTAGCAATGGCTCCCCCAAACTTAAAAACCAATATCCAGTGTACAAATGTATTTATTAAGCATTGACAATTGCATAAGAA TTTAATATTTAAGACTCTTGAGTCCTTGTGATTATTATGATTTTTTCATGGAGAAACTAAGACAAATTATAGTATTTTAT CAAATATAAATCATTCTATAAAAACTAGATTCTTGGCTCTTTCAATTTTTATTCAAGCTCCTCCACTGGTTGAAGTTACT GAAGATTTTTGGAGTAGGCTAATCCAGCAGGGCCATTGTTGGTCTCTTTTCATAGTAAGATATTACTATTATGTTTGATG AAACCTTTAGAATTCCTTAATGTCCAGAATTTAGGCTTTGTTTCTGTAAGTGTGCTATTATGTAAGAAATCAACATCTGG AAGCATAGCAAGCAACGTTTGCGGTAGAAATGCCGGACCCAATCTTCTCCCGCACGTTGCTTTTAGGATCAATTTTTTTT TTACATTTTTGGAAAGTAGTTTTGTACTTATTTATC
CDS sequence (LotjaGi4g1v0150600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCTAACCTCTACTGCTCAGGTTGATGATTTGGAGGGTATTAAGCGTTCTGTTGATGAATTTCTTAACAGAGTTGA CAAGATTGAGAAGCAAGTGGTCGAGGTTGAACAGTACTATGAATCTGCCGGTAATGTTCAAGGTGATAATTCTAAAGGAG GCTCAGTTGTAAAAGAGAAGGGCAGGGAGAAGCATCTCATTGAAACGAAAAAGCCGCTGCAAGATGCATCTGATGTGGAA ACTTCTGCTGCAAGGGGAATGCAGGAGCTAATGCGCCAGTTTTCCACAATATTGCGTCAGATTACTCAGCATAAATGGGC TTGGCCTTTTCTGGAACCTGTAGATGTAAAAGGTCTTGAGCTTGACGACTATTATGAGGTTATTGATAAGCCCATGGATT TCAGTACAATAAAAAGTAAAATGGAAGCTGAGGATGGAACTGGATATAAGAATGTACGGGAGATATACGCAGATGTAAGG TTGATATTTAAGAATGCAATGAAATACAACAATGAAAAACATGATGTTCATGTGATGGCAAAGACCTTGCTAGAAAAATT TGAGGAAAAATGGCTGCAACTCTTACCTAAAGTTGCTGAGGAGGAAAAGAGACTGTTAGAGGAAGAAGCACTGGCTCAAC TAGACATTCAGCTTGCTCAGGAGAAGACTTATGCCAATTTGGCTAGGGATTTAAGCGTTGAGCTTTATCAGGTTGATATG AAATTGAAGGATCTCAAAGAAATGGTGATTCAGAAATGCAGGAAACTGTCTCCTCAAGAGAAGAGAATACTTGGGTCAGC TCTCACCAAGTTGTCTCATCAAAACCTCAACAGGGCATTGGAGATAGTTGCTGAGAATAACCCAATCTTCCAATCTAGTG GTGAAGAGGTGGACCTTGACATTGATGCTCAGAGCGACTACACACTATGGAGGTTAAAGGTTTTTGTAAAAGATGCACTA GAAGCTCAAGGAAAGGTTGCTGGGGGTGTAGCTGTTAATGATAACCTTGACAACAAGAAAAACAACTCCAAAAGGAGGAG AGAATTAATTGATTCTCTTGCCAATACAAATATAAAAAAGACTAGGAAACTATCCACTTTATGA
Protein sequence (LotjaGi4g1v0150600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDLTSTAQVDDLEGIKRSVDEFLNRVDKIEKQVVEVEQYYESAGNVQGDNSKGGSVVKEKGREKHLIETKKPLQDASDVE TSAARGMQELMRQFSTILRQITQHKWAWPFLEPVDVKGLELDDYYEVIDKPMDFSTIKSKMEAEDGTGYKNVREIYADVR LIFKNAMKYNNEKHDVHVMAKTLLEKFEEKWLQLLPKVAEEEKRLLEEEALAQLDIQLAQEKTYANLARDLSVELYQVDM KLKDLKEMVIQKCRKLSPQEKRILGSALTKLSHQNLNRALEIVAENNPIFQSSGEEVDLDIDAQSDYTLWRLKVFVKDAL EAQGKVAGGVAVNDNLDNKKNNSKRRRELIDSLANTNIKKTRKLSTL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 7 | 366 | 360 | 2.0E-160 | – | |
| PANTHER | 7 | 366 | 360 | 2.0E-160 | ||
| Coils | 12 | 39 | 28 | - | – | |
| MobiDBLite | 44 | 65 | 22 | - | – | |
| Gene3D | 59 | 210 | 152 | 2.7E-38 | ||
| SMART | 83 | 196 | 114 | 1.0E-34 | ||
| SUPERFAMILY | 84 | 200 | 117 | 1.44E-35 | ||
| Pfam | 95 | 181 | 87 | 1.7E-19 | ||
| ProSiteProfiles | 102 | 177 | 76 | 19.068 | ||
| PRINTS | 105 | 118 | 14 | 1.2E-15 | ||
| PRINTS | 121 | 137 | 17 | 1.2E-15 | ||
| PRINTS | 158 | 177 | 20 | 1.2E-15 | ||
| ProSiteProfiles | 246 | 327 | 82 | 17.558 | ||
| Gene3D | 250 | 326 | 77 | 1.0E-13 | ||
| Pfam | 256 | 318 | 63 | 1.9E-16 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of LotjaGi4g1v0150600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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