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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0153300 |
| Transcript ID | LotjaGi4g1v0153300.2 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | LAG1 longevity assurance-like protein; TAIR: AT1G13580.2 LAG1 longevity assurance-like protein; Swiss-Prot: sp|Q8W4Y5|ASCL_SOLLC ASC1-like protein; TrEMBL-Plants: tr|I3T6V0|I3T6V0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0153300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:25491360..25497486) extracted from Lotus japonicus Gifu genome v1.2.
AAACCCAAACTCACTCCTCTGTTACTTTCTCTGTTATCATCATATATTATCTCAAATCACAAATCTCAAACCCTCTGTCA ACTTGCTGTGAGTAGAAAGGGCAATTTCGTCCAAAATTAAATTTCTCCACAGAACATGATATGCCGCAGTGTTCTCAATC ATAATAATAATAATCAACGCTCGCTCGCATGTTCTCTCACCTCTTTATGCGTCGTCGTTATAAGAATCAGATTCTGATTC ATTCCTACGATTTTCCGTTTGTTTCCCGAGAAAATTTCTGAGAAAACCACCACCACCATGACGGTGATGATGGATTGGAT TCATCGACTCAACACCATTGACTGGCACCATGAATCTTACCCTGACTACCAGGATTTCTACCTTCTCCCCTGCTTCGCGC TCTTCTTCCCCTCGCTTCGATTCTTCCTCGATAGGTTCCTTTTTGAGGTACCTTCTTCGATTTTCTCAACTCTTCTGACT TTTTCTCCTGATTGTTATGAACCTGTAATTGGATGTAAAACCTTGATTGACTTTTTCAGAATGTTGAGATTGCTTTAGCT TGAAAAGTATAAACTTCAAATTTGATGTGCTTTAATGTTGCTTTGACTTTATATTTATACATGATAGTTCTGGTTCTTTT TTCCCCACCTGTTACTGGCTCTGCTTGTGAATTTGTTGAGAAAAGTTGTATACCAATTTGTAGATGAAGCTATTGAGAAA GTTTTGCTTTGGACAACTAATTATGATTATGATTTTTTTTATAGGATACCTTTATGGTTTAACTAATGTCCATACTCCTT AAGCATACTGATTAAGGAAAACATTTATTAAAAGGTTACCACTATATTAATAGATACTTTCTATTTCTTGATTTCTTAGT CACTTGCTAATGACACTAGGTATCCTTGATGTATAGGTAAGCTTGTAATTTTTTTTTTAATTCACTGTGTTTAATATTTC TGGGTATTGGGTAAATAATTCTCTTGGTGTTCCTCTCCTACAGCATTGCCTGACCTGCTTGTTGTCATGGATTTTTTTCA AAGTTATGTGTAGTTTGGACTTTTAAAAAACAAGGCATTATCTGGATGCTCCATTCCTTTTTTCAATGGGTAGCTGCCAA AATTACATTAAGTCTCGCTTTAGTTCTTAACTTCAGCCCTTTTTCTCTCTATATTTTCCTTTAGACTCTTCATTACTTAC TATGTTACTGCCAGAAATTAAAAAAATGCATCTCATTTTCAATTTTTGAAGTCTTAGTTTGCAATCAAGTTTGCAATCAA GCTTTTGTGATGACAAAGTTCACCCTTTGCAGGGCTATGGTTGTTCTCTACTTTTTAAAATTCTTTTAGAATTTTTTTCT GGTTATATTTAGTCAATCTTAAGTGAATGGAATTTACAGAGAATGGCTAGAAGATTGATTTTTGGAAAGGGGAATGAGAA GCTGGACTACCAGACAGATGAGAGAAGTAAGAAGATTAGGAAATTTAAAGAATCAGCCTGGAAATGTATTTATTATCTAT CAGCTGAGATTCTTGCTCTGTCTGTAACCTATGATGAACCGTGGTTTACTGATACGAAAAATTTCTGGGTGGGGCCAGGG AGTCAGGTCTGGCCAGATCAAAAGATTAAGTAAGATTTCTTCTTAACATACCCAATTATTGTGGCAATTCAGTTGCAATT TTTAATCTATCTTCTGTAATAATTTTTCCTTTGGGAAACTTAAGTTTCCTTATAGAGTTGTGACTTACTAACATTTCAGG TTGAAATTGAAGACAGTCTATATGTATGCTGCTGGATTTTATTCATACTCCATTTTTGCTTTAATATTTTGGGAAACAAG ACGCTCAGACTTTGGGGTTTCCATGAGTCATCATGTCGCTACTGTCATTCTCATTGTGTTGTCATACATTTTTAGGTATG TTTTTATTGACTTCAATTTGTCTTGTCATCCAAGATTTTTATGAAATTCTGAAGTCACTTTGTTCCAAGCTCCTTGTCAA AATGGTTAAAGGGGGCAATCTTGTCTTTTATTTAATTTTATCTATGTGCTTTTTCCCAAGTTAAGCCATGTAATGAATTT TACTGACTTGGTCTTAATGGAAAATAGAATGTAAAATACTATTTTAAAATTTTAAGCAACATTTTTAAATTATGAAGGAT AACAGAATATCACCAGACTTGCCAAAACTAGAAAGAAAAGCAAAATATTTGAAATGTGTGAGATGTATTAAGGATGATGA GGGAAAAGTATTGGTCATTGAACAACATAGAAAGATGGAGTTAATTCCATACCTTTTTTAACGAATGACACGAGTTCTCT GTGAGATGAAGTACTGAAGATTCCCCTATAACTATAGGTGTGCATCAAATCTTTAAGGCCCCTAATCCTTTTATTTTATT CTTGATGTGTTTCCTGAACATATCCAAGAGATGATGCCTCGTTGCGTGCTTTTTTTATGGATGATATAGTTTTAGTTGGA GAATTAAAAATCAAGAGAATAAATGTAAAGTTAGAGACATGGAGACAAGCATTGGAAACACATGATTCTCGCCTACTTTG AAGTAAAATAAAGTAAATGAAATGTAAATTTAGCATGATACACATAAGTCATCACAGCCTAGAAAAATTGGTGATCATCC AATACCACAAGCATCACGACACGGCTCAAGTTTCTTTTTCCCATCATACAAAATGATGAGGGAGATAGAGGGAGATGTCA ATCATAGGATCCAAGTAGGGTGGATAAAATAGAGGAATAATTTGGGTGTGATTTGTGATAAAAAAAAAGTAACCCTTGAA CTTAAATGTAAAATTTGCCGCACAATTATAAGACTTAATGTTGTGTAGAACTGAATCTTGGGCAATATAAAGCCAGCAAG AAACTAAACTTGGTTCCGTAGAGATAGAATACGATAGATGAGTGAGTACACTAGAAGAGATAGGATGGGGAATACAACTA TTAGATAAAAATTGGAGTAACTCCCATTGAAGAAATGATGGTAGAGTCTCGCTTTAGGTGGTTTGTTCATGTAATAAGAA GGCCAATAGACAGAAGGATTGATCAGATGAAAGATATTTCTATAGCTAAAGGTAGACAGAGACCAAGAAAAACTATAAGC CAAATCATTTAGATATTTAGAGGTAAACAATTTATCCTTAAATTTAATACACTACAGAGTTTTATGATGTCACATTATCC ATATAGCAGACACCACCTGGTGGGAAAAAGCTTCCTTATTGTGTGTTTTAACTACTGCTGCACACACGTGAGACAGGGAG AGGGAACAAAGTATCTATGGCCCACACTAATTCTATTTTATTTGATTATGCTTCTCTTAGAAAATTCTCTGTTACAGTTT TGTGTTTCTCTTCTATGTTCAATACATTCAGGTTTGCTCGTGTTGGATCAATTGTTTTAGCAATACATGATGCTAGTGAT GTGCTTCTGGAGATAGGGAAAATGTCCAAATACAGTGGTGCTGAAACAATGGCTAGCATTGCATTTATTTTATTTGTTTT CTCATGGGTCATATTGCGCCTCATTTACTACCCATTCTGGATTCTTTGGAGTACAAGGTTTGTAACAGTTCATTTCCCAG TTTACATCATTTTTGCTTCTGCTCTCTCTGGCCACATTTATTATGTGGCTTCTTATCTAGGTGAATAACAATTTGGTGTC TCTACATAAGTCCATATATTTATTGAAACTAAAATATATTTACCCTAACACTGGAAGGATGATGGTCCTGTTGCATTTTC AGGTTCAGTTGTCATCTTTTGCAAATGTTTGCATATTTTTTTGATACATACTTAACAAAATAGAAGCTGTACTAGTTAGT ATTTAATCCCTTTAATTTTTTTTATAAATTATTTTTTTTTTTCTTCTTTTTCCTGATAACTGTTAAATTTTCATGTATAC TGGTGCCTTTATCACAAATTAAGTGTGTGCGGAAGCGTTTTAGTGGTTTAGATTCTGTGCTGGGGTACAACAATGTTTCC ACTCCTGGTACTTTTTGAGAGCTGTTTCAGTATCCATCATATTGTAAAACATGCATGTTCTGCTATTTCACAAAATTACT CAGCTGAAAACTGGAATCGATTGCAACAAGTGCCACTGTGCCAGAAGAAAAAAGAAGATATATGTACTGCTGTAGGAAAA AGCTGAAGCCATTTTCTTGGTTATGGCTAGTTTCCCTAGAGGCTTTAAGATTATGTTTAGTTGTCTTGTCTGGAAGAAAT GTAAAAGAAAATTTGTCAACAAGGGGAAGTTTCCAAGTGAATCTTTCTGCAGTCTTATTATAAGCACAATAAAAGAAATC TTATTTCCGTCTGAGAAATTTTAACAATTCAATATAAGGATCAATAGTAGATCTATCCTTTTTTTTTATAAATCATTACA TTTCTCGATTTAATTGTTTAACTTTCTTCACTTTTTTTGCCAGCTATGAAGTTCTGCTCAACTTGGATAAGGAAAAGCAC CGAGTGGATGGCCCAATATATTATTATGTGTTCAATAGTCTTCTATACTGTTTGCTAGTTCTCCATATTTATTGGTGGGT GTTGATATATCGGATGCTTGTTAAACAAATCCAAGCAAGAGGAAAACTTAGTGAAGATGTTCGATCAGGTAAGTTGAATC TATGCATGGCCTCCTGATGTTAAACTATTGATCAAAGTTTCTGTAATGTATTCCCTGTGCTTGGTTTCTGCATATGAGTT GACGAAAAAAAAAAAGAAAAGTATTATGATTGTAGAAGTTCCGACTTGAACTATTGTCAACTCAATCTGGCATGTGGATT AAAAAGTATAGGTTGACTTGACTTCTGCAAAGGTTATTTCCCTCACTCAATGAGGATACTGAAATTATTAGTAATTAACA AAAAAATATGATGTTAGGGCATATTTTTGACATGATCACTTTGATGTGTTAGCTTAGAATCTGAAAATAATTGCGTTATA TTTAATCAATCATAAATTTCTCTAGTTGCAGTCATGGCTTTAGTTTGTAAAATTCTGAAACTAATAAGCTATGTGTGTAT TGCTTAATACAGACTTTCTTAAGTTGGTTATCCGATCATTAACTACTGCACTTTGTTTATGCAGATTCAGAAGATGAACA TGAAGATTGAGTAGGAAAGCAGGACCATAATATTTCTTAAGGCAAGGTGAACTTAAAATGTTGACAATTTTTTAACACCC TAGATCTAGACATAATGAATATAGTCATTTTTTAGGGATCATGTTGGTACTGTCAAATTGCCCTTATTTTATCAATTAAA AAAACAATTCCATAACTTTATTGTAAACTTAGAACCAGCTTATCATGTCTTTTCTACCAGTTTAACAATATAAGCTTAGA AGGAAACTTCATAAAGAAAATGGCTTAAGCCTTCACCCCTCTCTTTCTCAGTGCATGTTTCGAACTAGTATGATCTTTTG TGCGTGCATTACCTCAAGGTACATTTGGCATTTGAGGCAAAAGATATAATATGAATTCCATGTTTGTTACGTATTGAGAT AAAGAGAAGTTTTAAATAAGATACAACTGCAGAAGCTTGAAATCTGTCATGTGAAGTGGCCTTTTTTACGGTCCTTTAAT TTAAGGAATATGCTTTTTGGTTTTATTTCTGGCACAGATAAATTTGTTGGCTTCAAACATTTTATCCTTCGGCCACAACG CTAATCATTTTCAAATGTTCATTCAAATTGGAGGGGATTGTATTTATACTGATTTGAGTTCAGGCGACGGAGCTGATTTA AAAGGGCAGCAGATGCAGAGAATTATCAATCTTCTAAGCTATTGGTGTATGAAGCACCTTCTGAAGTTGAGGTCTGCTGC CTGACATTTTGTTATTTTGACTTGCTTAAAAATTTGTCAATACTGATTCCAATTACAAGTGTGAAGGACTATTGACCCCT TAACGTTTTCTGGCACAAATGTTATCCTGGGTTTTCATTTATTGGAGAACAAAAGTTGTTGGACTTTGGTGTCACAGATC ATTCTGGGACTAGTCTTGTTCATCGTAATGTTGAAAGATTTTAGTTCTAATTTATTACGTAAGGCAAATGTCTATTATAA ATGGTTTTGCTAAGCCATTAATGGCGCTGCTTTAGAAAGTTTCTTAT
CDS sequence (LotjaGi4g1v0153300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACGGTGATGATGGATTGGATTCATCGACTCAACACCATTGACTGGCACCATGAATCTTACCCTGACTACCAGGATTT CTACCTTCTCCCCTGCTTCGCGCTCTTCTTCCCCTCGCTTCGATTCTTCCTCGATAGGTTCCTTTTTGAGAGAATGGCTA GAAGATTGATTTTTGGAAAGGGGAATGAGAAGCTGGACTACCAGACAGATGAGAGAAGTAAGAAGATTAGGAAATTTAAA GAATCAGCCTGGAAATGTATTTATTATCTATCAGCTGAGATTCTTGCTCTGTCTGTAACCTATGATGAACCGTGGTTTAC TGATACGAAAAATTTCTGGGTGGGGCCAGGGAGTCAGGTCTGGCCAGATCAAAAGATTAAGTTGAAATTGAAGACAGTCT ATATGTATGCTGCTGGATTTTATTCATACTCCATTTTTGCTTTAATATTTTGGGAAACAAGACGCTCAGACTTTGGGGTT TCCATGAGTCATCATGTCGCTACTGTCATTCTCATTGTGTTGTCATACATTTTTAGGTTTGCTCGTGTTGGATCAATTGT TTTAGCAATACATGATGCTAGTGATGTGCTTCTGGAGATAGGGAAAATGTCCAAATACAGTGGTGCTGAAACAATGGCTA GCATTGCATTTATTTTATTTGTTTTCTCATGGGTCATATTGCGCCTCATTTACTACCCATTCTGGATTCTTTGGAGTACA AGCTATGAAGTTCTGCTCAACTTGGATAAGGAAAAGCACCGAGTGGATGGCCCAATATATTATTATGTGTTCAATAGTCT TCTATACTGTTTGCTAGTTCTCCATATTTATTGGTGGGTGTTGATATATCGGATGCTTGTTAAACAAATCCAAGCAAGAG GAAAACTTAGTGAAGATGTTCGATCAGATTCAGAAGATGAACATGAAGATTGA
Protein sequence (LotjaGi4g1v0153300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTVMMDWIHRLNTIDWHHESYPDYQDFYLLPCFALFFPSLRFFLDRFLFERMARRLIFGKGNEKLDYQTDERSKKIRKFK ESAWKCIYYLSAEILALSVTYDEPWFTDTKNFWVGPGSQVWPDQKIKLKLKTVYMYAAGFYSYSIFALIFWETRRSDFGV SMSHHVATVILIVLSYIFRFARVGSIVLAIHDASDVLLEIGKMSKYSGAETMASIAFILFVFSWVILRLIYYPFWILWST SYEVLLNLDKEKHRVDGPIYYYVFNSLLYCLLVLHIYWWVLIYRMLVKQIQARGKLSEDVRSDSEDEHED
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 26 | 26 | - | – | |
| PANTHER | 11 | 309 | 299 | 3.4E-172 | ||
| PANTHER | 11 | 309 | 299 | 3.4E-172 | – | |
| TMHMM | 27 | 44 | 18 | - | – | |
| Phobius | 27 | 44 | 18 | - | – | |
| Phobius | 45 | 132 | 88 | - | – | |
| ProSiteProfiles | 77 | 291 | 215 | 29.061 | ||
| SMART | 77 | 291 | 215 | 3.7E-79 | ||
| Pfam | 78 | 284 | 207 | 1.1E-41 | ||
| TMHMM | 132 | 151 | 20 | - | – | |
| Phobius | 133 | 151 | 19 | - | – | |
| Phobius | 152 | 165 | 14 | - | – | |
| TMHMM | 161 | 178 | 18 | - | – | |
| Phobius | 166 | 190 | 25 | - | – | |
| Phobius | 191 | 210 | 20 | - | – | |
| Phobius | 211 | 239 | 29 | - | – | |
| TMHMM | 215 | 237 | 23 | - | – | |
| Phobius | 240 | 258 | 19 | - | – | |
| TMHMM | 259 | 281 | 23 | - | – | |
| Phobius | 259 | 283 | 25 | - | – | |
| Phobius | 284 | 310 | 27 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi4g1v0153300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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