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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0155900 |
| Transcript ID | LotjaGi4g1v0155900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | High-affinity nitrate transporter 2.2; TAIR: AT1G12940.1 nitrate transporter2.5; Swiss-Prot: sp|Q9LPV5|NRT25_ARATH High affinity nitrate transporter 2.5; TrEMBL-Plants: tr|I1KXC5|I1KXC5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0155900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:27139588..27142095) extracted from Lotus japonicus Gifu genome v1.2.
CTTGTTTTCTTAATTAGTAGACAATTCAATAAAAAATACTTGCAAGTAACCTCGTAGTATTCAGCACATAGCAGTGTTCA CCTTTCAAATTTCAACCACCAACATGCTTATAAATTCGCACTTTGCTCAAAGACATAATAAGTGGTTGACTTGGTGCACA AAACAGTAGAGAAATTTTGGTGTCTTATATATTTAAAATCAACACTTCACCCTTGTTGGTTAGGCCATTGCAATCTAAGG AACAAAGATGGATCTTGAACTCCCAAATTTATCTGCCAATGAATCTCAACAACCAAAATTCACTCTTCCTGTGGATTCAG AAAACAAGGCCACTGAATTCAGATTATTTTCTTTAGCTAAACCCCACATGCGTTCATTCCATCTATCTTGGTTCTCCTTC TTTGCATGCTTTGTTTCCAGTTTCGCCGCAGCACCCCTTGTTCCCATCATTCGTGACAACCTCAACCTCACAGCCACAGA TGTTGGAAATGCTGGAGTTGCATCTGTCTCAGGTGCTGTCTTTGCCAGAATAGTCATGGGAACAGCCTGTGACTTGTTTG GACCGCGCCTCGCATCGGCCTCACTCATCTTCCTCACCGCGCCAGCAGTGTACTGCACTTCCATCATCTCCTCAGCTAAC TCCTACCTCCTCGTCCGCTTCTTCACCGGCTTCTCCTTAGCTACCTTCGTCTCCACGCAGTTCTGGATGAGCTCCATGTT TTCAACCAATGTTGTTGCCTCAGCAAATGGACTAGCAGGTGGATGGGGAAACCTTGGAGGAGGAGCAACACAGCTCATCA TGCCCCTTGTGTTTTCCCTCATCCAAGACTTTGGCGCTACCAAATTCACCGCGTGGCGAATCGCTTTCTTCATTCCTGCT TTTTTACAAATGCTGACAGCTTATTTCATTTTGGTATTTGGTCAGGACATGCCGGATGGGAACTACCATCGGTTGGAGAA GTCAGGGGATAAACCAAAAGATGAATTGTCAAAAGTTGTTTATCACGGAGTCACAAATTATAGAGCGTGGATTCTAGCAT TGACTTATGGTTACTGCTTTGGTGTGGAACTTACCATTGACAACATCATTGCTGAGTACTTCTATGACAGGTTTAATCTG AAACTTCACACTGCCGGAATCATCGCTGCGAGTTTCGGCTTAGCTAACATATTTTCTAGACCTGGAGGGGGTTATGTATC AGATGTCATGGCAAGGAGGTTTGGAATGAGGGGTAGGCTATGGATCTTGTGGCTGACTCAAACCTTGGCTGGTGTGCTCT GTATAATCATGGGCTTGGTTGGATCTCTAAGTGTATCCATCATTGTTATGATCATATTCTCTGTCTTTGTCCAAGCTGCA TGTGGAATGACCTTTGGAATTGTTCCCTTTGTCTCAAGAAGGTGCGTTTTCTAGTCGTTTTCGTTAGAAGTATAATATAA AACGATTTATGTGGCTTCATCCAAAAGCTTAATAGTTGGTCTATGACAGTTTTATCAATTGAATCATTTAAACATTATTT CTAGCCTTTTAGAACTTTGGCTAGGCCTAGCTTATCCTAGATCTGTTTATTGAACCACCATGTCAAACACAAATTTCTAG TCCTGTAAAATTTCACGCTCCAGTTATTCACCTTCGGGCAGGCGTGAGGGGGCATATTAAGGTTTTATATTGACTAGAGA TATGACCTAAATAATCCTTATAAGGCTAGATTTTGGTTGAGTCAGACTCAAGAGATCCAATATAAAACTTGTTTCCCTTT TTCTCCACTTTAAAGTATAATTGCAAATATTGAACATTGAAGCTCTGACAATGTCAATATTCTGTGTGATTGTTTCTAAT ATTCTGCTATGCATCTTCAGGTCATTAGGGGTCATATCTGGAATGACAGGAGGAGGAGGCAATGTGGGTGCAGTGGTGAC TCAGTTAATATTCTTCAAAGGATCAAGGTTTTCTAAAGAAAGAGGAATAACTCTAATGGGTGCCATGATCATAATATGCA CATTGCCAATATGCTTAATCTACTTTCCACAATGGGGTGGGATGTTTTTGGGCCCTTCATCTAAGAAGGTCACAGAAGAA GATTACTACATGTCTGAGTGGAACTCCAAGGAGCAGCAGAAAGGATCACATCATGCAAGCTTGAAATTTGCTGATAACAG CACAAGTGAAAGAGGCAGAAAACACAACGGTGCAACTAGACCTGCTGAGATCACACCCCCACATGTTTGATTTCTCCTCA GGCCTCTTCAGCAATGTTAACCACTGTATCCTCCCTTGTAGCACAACCCAAAAGCTTGTATAATTTGGTTTCCCAATAAA GTTATCCTTAAGAAGAGAACTGGTTTCAAACCTGTTTGTCATGTCAATGTCATTGTTTACTCTTGTATAGAGTACCCTCT CTTTGTAAAGCAGAATTTTCTAATTTTCAAACATGTCCTAGAACAGCTGTTGATATTGCAAAACTTAAAGCTTCCATGAA GAAGAAATATGACTCTGATATAAAATTA
CDS sequence (LotjaGi4g1v0155900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCTTGAACTCCCAAATTTATCTGCCAATGAATCTCAACAACCAAAATTCACTCTTCCTGTGGATTCAGAAAACAA GGCCACTGAATTCAGATTATTTTCTTTAGCTAAACCCCACATGCGTTCATTCCATCTATCTTGGTTCTCCTTCTTTGCAT GCTTTGTTTCCAGTTTCGCCGCAGCACCCCTTGTTCCCATCATTCGTGACAACCTCAACCTCACAGCCACAGATGTTGGA AATGCTGGAGTTGCATCTGTCTCAGGTGCTGTCTTTGCCAGAATAGTCATGGGAACAGCCTGTGACTTGTTTGGACCGCG CCTCGCATCGGCCTCACTCATCTTCCTCACCGCGCCAGCAGTGTACTGCACTTCCATCATCTCCTCAGCTAACTCCTACC TCCTCGTCCGCTTCTTCACCGGCTTCTCCTTAGCTACCTTCGTCTCCACGCAGTTCTGGATGAGCTCCATGTTTTCAACC AATGTTGTTGCCTCAGCAAATGGACTAGCAGGTGGATGGGGAAACCTTGGAGGAGGAGCAACACAGCTCATCATGCCCCT TGTGTTTTCCCTCATCCAAGACTTTGGCGCTACCAAATTCACCGCGTGGCGAATCGCTTTCTTCATTCCTGCTTTTTTAC AAATGCTGACAGCTTATTTCATTTTGGTATTTGGTCAGGACATGCCGGATGGGAACTACCATCGGTTGGAGAAGTCAGGG GATAAACCAAAAGATGAATTGTCAAAAGTTGTTTATCACGGAGTCACAAATTATAGAGCGTGGATTCTAGCATTGACTTA TGGTTACTGCTTTGGTGTGGAACTTACCATTGACAACATCATTGCTGAGTACTTCTATGACAGGTTTAATCTGAAACTTC ACACTGCCGGAATCATCGCTGCGAGTTTCGGCTTAGCTAACATATTTTCTAGACCTGGAGGGGGTTATGTATCAGATGTC ATGGCAAGGAGGTTTGGAATGAGGGGTAGGCTATGGATCTTGTGGCTGACTCAAACCTTGGCTGGTGTGCTCTGTATAAT CATGGGCTTGGTTGGATCTCTAAGTGTATCCATCATTGTTATGATCATATTCTCTGTCTTTGTCCAAGCTGCATGTGGAA TGACCTTTGGAATTGTTCCCTTTGTCTCAAGAAGGTCATTAGGGGTCATATCTGGAATGACAGGAGGAGGAGGCAATGTG GGTGCAGTGGTGACTCAGTTAATATTCTTCAAAGGATCAAGGTTTTCTAAAGAAAGAGGAATAACTCTAATGGGTGCCAT GATCATAATATGCACATTGCCAATATGCTTAATCTACTTTCCACAATGGGGTGGGATGTTTTTGGGCCCTTCATCTAAGA AGGTCACAGAAGAAGATTACTACATGTCTGAGTGGAACTCCAAGGAGCAGCAGAAAGGATCACATCATGCAAGCTTGAAA TTTGCTGATAACAGCACAAGTGAAAGAGGCAGAAAACACAACGGTGCAACTAGACCTGCTGAGATCACACCCCCACATGT TTGA
Protein sequence (LotjaGi4g1v0155900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDLELPNLSANESQQPKFTLPVDSENKATEFRLFSLAKPHMRSFHLSWFSFFACFVSSFAAAPLVPIIRDNLNLTATDVG NAGVASVSGAVFARIVMGTACDLFGPRLASASLIFLTAPAVYCTSIISSANSYLLVRFFTGFSLATFVSTQFWMSSMFST NVVASANGLAGGWGNLGGGATQLIMPLVFSLIQDFGATKFTAWRIAFFIPAFLQMLTAYFILVFGQDMPDGNYHRLEKSG DKPKDELSKVVYHGVTNYRAWILALTYGYCFGVELTIDNIIAEYFYDRFNLKLHTAGIIAASFGLANIFSRPGGGYVSDV MARRFGMRGRLWILWLTQTLAGVLCIIMGLVGSLSVSIIVMIIFSVFVQAACGMTFGIVPFVSRRSLGVISGMTGGGGNV GAVVTQLIFFKGSRFSKERGITLMGAMIIICTLPICLIYFPQWGGMFLGPSSKKVTEEDYYMSEWNSKEQQKGSHHASLK FADNSTSERGRKHNGATRPAEITPPHV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 45 | 45 | - | – | |
| PANTHER | 9 | 504 | 496 | 1.5E-289 | – | |
| PANTHER | 9 | 504 | 496 | 1.5E-289 | – | |
| Gene3D | 25 | 226 | 202 | 1.0E-31 | – | |
| SUPERFAMILY | 33 | 441 | 409 | 1.09E-48 | ||
| ProSiteProfiles | 43 | 444 | 402 | 10.186 | ||
| CDD | 44 | 437 | 394 | 1.30211E-109 | – | |
| TMHMM | 44 | 66 | 23 | - | – | |
| Phobius | 46 | 67 | 22 | - | – | |
| Pfam | 48 | 404 | 357 | 3.4E-21 | ||
| Phobius | 68 | 78 | 11 | - | – | |
| Phobius | 79 | 96 | 18 | - | – | |
| TMHMM | 79 | 98 | 20 | - | – | |
| Phobius | 97 | 107 | 11 | - | – | |
| Phobius | 108 | 127 | 20 | - | – | |
| TMHMM | 108 | 126 | 19 | - | – | |
| Phobius | 128 | 133 | 6 | - | – | |
| TMHMM | 133 | 155 | 23 | - | – | |
| Phobius | 134 | 153 | 20 | - | – | |
| Phobius | 154 | 172 | 19 | - | – | |
| TMHMM | 170 | 192 | 23 | - | – | |
| Phobius | 173 | 193 | 21 | - | – | |
| Phobius | 194 | 204 | 11 | - | – | |
| Phobius | 205 | 225 | 21 | - | – | |
| TMHMM | 205 | 224 | 20 | - | – | |
| Phobius | 226 | 257 | 32 | - | – | |
| Gene3D | 247 | 444 | 198 | 7.7E-28 | – | |
| Phobius | 258 | 277 | 20 | - | – | |
| TMHMM | 260 | 282 | 23 | - | – | |
| Phobius | 278 | 288 | 11 | - | – | |
| Phobius | 289 | 309 | 21 | - | – | |
| Phobius | 310 | 328 | 19 | - | – | |
| Phobius | 329 | 351 | 23 | - | – | |
| TMHMM | 331 | 353 | 23 | - | – | |
| Phobius | 352 | 357 | 6 | - | – | |
| TMHMM | 358 | 380 | 23 | - | – | |
| Phobius | 358 | 382 | 25 | - | – | |
| Phobius | 383 | 387 | 5 | - | – | |
| TMHMM | 387 | 409 | 23 | - | – | |
| Phobius | 388 | 409 | 22 | - | – | |
| Phobius | 410 | 420 | 11 | - | – | |
| TMHMM | 419 | 441 | 23 | - | – | |
| Phobius | 421 | 440 | 20 | - | – | |
| Phobius | 441 | 507 | 67 | - | – | |
| MobiDBLite | 466 | 507 | 42 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0155900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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