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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0166000 |
| Transcript ID | LotjaGi4g1v0166000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Quinone oxidoreductase-like protein; TAIR: AT1G23740.1 Oxidoreductase, zinc-binding dehydrogenase family protein; Swiss-Prot: sp|Q9ZUC1|QORL_ARATH Quinone oxidoreductase-like protein At1g23740, chloroplastic; TrEMBL-Plants: tr|I3S600|I3S600_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0166000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:31694307..31698685) extracted from Lotus japonicus Gifu genome v1.2.
CACAGGGCTAACTGTTGAGCTTGAAGCAGAGACAGGTGTGATAATCCGTTAGCAAACATGTTTCTCTCAGCTGCACTCTC CTCCACAACTTCCCACCTCACTATCCTCCCTTCTCTCATCACTTCCACAACCTCTCCACTTTCTCGCAGATTTTCCTTTA CTTTCCTAGAAAACAGAAACCCAACAACCACAACAACCCTCTTCCCTTACAAGCAGAGACTCTTGGTAAAGTCTCAGGCT ACTGCACCTGCTTCTTCTGAGGCAGTGAAAGTGTCACCTGTACCTTCTGAGATGAAAGCGTGGGTCTATGGGGAATATGG CGGTGTGGATGTTTTGAAATTTGATTCCAATGTTGCTGTGCCTGATTTGAAGGAGGATCAGGTCCTTGTTAGAGTTGTTG CTGCAGCTCTTAACCCTGTTGATGCCAAGAGAAGGCAGGGGAAGTTCAAAGCCACTGATTCTCCTCTTCCGGTGACTCAC TTTCTTTCACATTTGTTAATTTTTCTGTTCTTTCCCTCTGTCTCTTGTTTTTGTTTTTATTTTATTTGGGGTGGGGGAGT TAGGTGAGTGTCGATGATTCATGGTCTAATCTAAACACCAGCGGATTTGATGTATTGGGTTGAAGTACCCCTTGTAGTTA TATTCAATAAATCGTCATGGCTTATCAAAAAAAAAAAAAAAAAACCAACGGGTTGGTGAGAGAGTGGAGTATGACAGGAT GTCGCACCTCACAAAGGTTGGTTGCAGGTTCGAGCCTACGCTCGTTATCTTTATGTGAGGTAAATGTAAGTCTGTCCTAA GTGCAAGACAGCTTCCAATGAAGGATTTTGTTCCTATTTTATTGGGGGTGGGGATGATGAGCTGAGTTTCAATGGTTTAT GGTGTAGTAGGAAAATAGTAGCTCTGAGAAAATCATGGTAGGTGGTAATTTCTATTCCTAAAGAATAAGGATAATTAAAT TAGCTAGCTTATTTTAATCTTCTTTACTATGCAAAAAAATTAGAGCAAATTTTGTTTCTGAAAACAGTTTTACAGAGCGT TGGAAACAGAAAATAAAGTAACAGTTTTATAATTAAAACTGAACAGAAAATGATATCTAGAAACCAAAGAGCACTTGGTA TCTCAATTCAACTGTTTCTGACACATGAAGAAAAGAGGAAATAAGTTCAATAATTCTTATGGCCAAGAGTCCAAAGTTTG TATGATGCAGTGCAGTCTTACAGTAGAATTCAGGTTGAAAAAGGGAAGAACAGTTTCAGTTGATTTCTTAATTTTGTATC ATGGGGATAGCTAGGTAATGAAATCAAATCTGGCTTGTTTTGTCTATAGACTGTTCCGGGCTACGATGTTGCCGGTGTGG TGGTGAAGGTTGGCAGTGAAGTAAAGGAGTTCAGAGTGGGTGATGAAGTATATGGAGATGTAAATGAGAAAGCACTAGAA GGGCCTAAGCAGTTTGGATCTCTGGCTGAGTACACAGCTGTTGAGGAGAAATTGTTGGCACCAAAACCTAAGAATTTGGA TTTTGCTCAAGCCGCTTCTCTTCCTCTTGCAATTGAGACTGCTTATGAGGGTTTGGAGAGAACTGGATTTTCTTCTGGTA AATCCATTCTTGTCCTAAATGGTTCAGGTGGAGTTGGAAGCCTTGTTATTCAGGTAATTATTCTCCAAATTAGTTCTTTC ATGCTGAAATAAACACAGTCATTATAGACTTTAGAGTTATCTTAGTACATTATGTAACATAAACTTCTTTATTTGAGTTA TCTGAGTATATTATGTAGCCTAAACTTGTTTTTTGAGTTATCTTAGTACTTTATGTAACATTTAATGTTTTGAGTGATAA AGGAATGCATAATTTACTTGACTAGGCATCTACAGATGAAATAAGTTTCTGGTTTTAAGTTTCAAGCATGAGGCAAGTTT CTGGTTCTAACATTGAGATGGTTTATGAAAATCATACAATTAACAAGTTATATATTTTATCCATGCCTTCAATACAGCTT GCTAAGCAAGTTTTTGGAGCTTCAAGAGTTGCTGCAACTTCAAGCACTAGAAATTTGGAGCTTTTGAAAAGCCTGGGAGT TGATTTAGCTATTGACTACACAAAGGAGAACTTCGAAGACTTACCAGAGAAATTTGATGTTGTTTATGATGCCATCGGTA AAATTCTTTTCTACTTGTTCAGTCCTGTTACGTTCTTCTGCGTTTTCCATACAAATTACGCAGTTCTCTAATAATATTTG AGATTGTATTTGATGAATTCTGTTAAGTACACTAAGCACTAGCAGTAGCTTTCTATTTTCCAATAAGCCGTTAGTAATGT TAGTTTAGCTTTCCTAATTTATCAGGTTAGTTAGAAATTAGTTGTAACAACTAGCAAGAGATAGTTATCACATGCAGTCA TCTACATATGCTAGTATACTGTATAGAATACTCTATAATGTATAAATACACACAGTGTAACAAACTCTGATTCATTTTTT GGATAATAGAATCATTCACAAATTCAATTCTATGAACTTCATTCACTACAAAACAATCAAGGGAGAAGAGTTTGTGAAAA TAACCTTGCTATGGCCTTGCATGCCAAAATTTCTATTTCATTAGATAATTGATTAATGGAGCTAGAAGTATATAAACCAT GTTTATTGAATATGAAGTGACATTTTCAATGTAATTTCAAGACTATATAAAGCCTGTTTAGTATAGAAAAGTGTTATTAG TATGGGTAGATAGTCTTTGAATTTGGGTTAGACCTAATCTAAGCTAGCTTAGGGGTGAGGGTTACTCTATCATTTATAAA TATTTATTTGACATTTCTAGTGAATGTGAGACTTCTCAACACATCATCTCACACCCAGTACTGAACATCTAGAGCGTGGA ATTTGCACGAATGAACATCTGCGGGTGACTCATATATGAGTGGTATCCCATAAACAGATTTAAGATAAACTCTAATACCA TATTAGAATTCGGGTTAGATCTATCTCTACCCCAAAAGCGCTTAGGAGTGAGGCTTCATCTACCCTTTACAAAGACTTAT TTGGCTATATATCTAGTCAACTGGTCAATCTGAGACTTCTGAACAAATAGAAAGGAACTTGCTAGCATTTATGTCTTTAT ACCCAAAAATTCATTAAAATAATCGAATATATTAAGGAAGATCCATCAAAAAATATTCCTATAACCTCTCTCTTTCAGAT CAAATTGTACGACTTATAGTGTGTATTGTTTTTCATTTTTTGCTGGTGATTTGCAGGGCAATGTGACAGAGCAGTGAAGG CGATCAAAGAAGGTGGTAGTGTGGTAGCACTCACAGGTGCTGTTACACCACCTGGCTTCAGATTTGTAGTAACTTCCAAT GGAACTGTTCTGAGGAAATTAAACCCTTATTTAGAGAGTGGAAAGGTGAAGCCAATTGTAGACTCCAAAGGTCCATTCCC TTTCACCCAACTAGCTGAAGCCTTCTCTTACCTTGAAACAAACCGAGCTACTGGAAAGGTTGTTATACATCCCATCCCAT GAATTAAATAAAAGTAATAGTCAATTTTGCTATGTGTCTTGTAGTGTTCACTGTTCACACTATGAGTAAATGTAAATCAG AGTTCAGATAACAGCTGCAAAATATATAGCTTCACTCTTACATTCATACTCCTTTTAAAATTTCCATGACATTTAGTCCA TTATATTTACTTCAACATAATAAGACGAGAAGGAGAACAAGTAGTGTTTGTACAAGAGAACCTGTTGTTCTGTCAAAAAG AAGACACAGAGACTTGTTACAAGATGCAAGTACTTTTTCGTAATGTTTGTAGGTGCCATACATACCATGATAAACACCTT GCCGTAATGTAAGCTCCTTTATCATGTCTTCTCGGACTTGCTTTCAATTTTGTTCTCCCTTACCCATCAAGGAAGAAATG CATCTATATCCACAATTGTCATCATCTTCAACATTGTGAATGTCAATGACATACTCACGGAGGAACGGGCACTTCATGGA TGTAGTTGGTCGAGTAAACTTTGCCTTTCGGGTGCTGTGGCGGAGCTTAGCTGAGTTGCTTGCTATCCTCTTGCTTCTCT TCTTAGGTGCAGATTGCTTCGAAGGAATGCTCTTCCGTTTTGTCGACCGGGTCTTACGCCCCTTGCCTTGTGGAGCTGAT GAGTTGCTAGCTTGCTTTGACCCAGCTATTGCATCAACATTCTCCCAAGAACAAGGAATGCGTCTGGTAGAACCCTTAGG TTCATTGGGCCGACCCCTTGTAGGCAACTTGTTTAGAGGAGGACACATAGAAGTCTGATCCGGGTATGCAATCTCCCGAA GCCTCTCTTTGATAGTTTGTCTTCTTGAAACATTAGCTTCTTCAAACATCTTTGCAATG
CDS sequence (LotjaGi4g1v0166000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTCTCTCAGCTGCACTCTCCTCCACAACTTCCCACCTCACTATCCTCCCTTCTCTCATCACTTCCACAACCTCTCC ACTTTCTCGCAGATTTTCCTTTACTTTCCTAGAAAACAGAAACCCAACAACCACAACAACCCTCTTCCCTTACAAGCAGA GACTCTTGGTAAAGTCTCAGGCTACTGCACCTGCTTCTTCTGAGGCAGTGAAAGTGTCACCTGTACCTTCTGAGATGAAA GCGTGGGTCTATGGGGAATATGGCGGTGTGGATGTTTTGAAATTTGATTCCAATGTTGCTGTGCCTGATTTGAAGGAGGA TCAGGTCCTTGTTAGAGTTGTTGCTGCAGCTCTTAACCCTGTTGATGCCAAGAGAAGGCAGGGGAAGTTCAAAGCCACTG ATTCTCCTCTTCCGACTGTTCCGGGCTACGATGTTGCCGGTGTGGTGGTGAAGGTTGGCAGTGAAGTAAAGGAGTTCAGA GTGGGTGATGAAGTATATGGAGATGTAAATGAGAAAGCACTAGAAGGGCCTAAGCAGTTTGGATCTCTGGCTGAGTACAC AGCTGTTGAGGAGAAATTGTTGGCACCAAAACCTAAGAATTTGGATTTTGCTCAAGCCGCTTCTCTTCCTCTTGCAATTG AGACTGCTTATGAGGGTTTGGAGAGAACTGGATTTTCTTCTGGTAAATCCATTCTTGTCCTAAATGGTTCAGGTGGAGTT GGAAGCCTTGTTATTCAGCTTGCTAAGCAAGTTTTTGGAGCTTCAAGAGTTGCTGCAACTTCAAGCACTAGAAATTTGGA GCTTTTGAAAAGCCTGGGAGTTGATTTAGCTATTGACTACACAAAGGAGAACTTCGAAGACTTACCAGAGAAATTTGATG TTGTTTATGATGCCATCGGGCAATGTGACAGAGCAGTGAAGGCGATCAAAGAAGGTGGTAGTGTGGTAGCACTCACAGGT GCTGTTACACCACCTGGCTTCAGATTTGTAGTAACTTCCAATGGAACTGTTCTGAGGAAATTAAACCCTTATTTAGAGAG TGGAAAGGTGAAGCCAATTGTAGACTCCAAAGGTCCATTCCCTTTCACCCAACTAGCTGAAGCCTTCTCTTACCTTGAAA CAAACCGAGCTACTGGAAAGGTTGTTATACATCCCATCCCATGA
Protein sequence (LotjaGi4g1v0166000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFLSAALSSTTSHLTILPSLITSTTSPLSRRFSFTFLENRNPTTTTTLFPYKQRLLVKSQATAPASSEAVKVSPVPSEMK AWVYGEYGGVDVLKFDSNVAVPDLKEDQVLVRVVAAALNPVDAKRRQGKFKATDSPLPTVPGYDVAGVVVKVGSEVKEFR VGDEVYGDVNEKALEGPKQFGSLAEYTAVEEKLLAPKPKNLDFAQAASLPLAIETAYEGLERTGFSSGKSILVLNGSGGV GSLVIQLAKQVFGASRVAATSSTRNLELLKSLGVDLAIDYTKENFEDLPEKFDVVYDAIGQCDRAVKAIKEGGSVVALTG AVTPPGFRFVVTSNGTVLRKLNPYLESGKVKPIVDSKGPFPFTQLAEAFSYLETNRATGKVVIHPIP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 14 | 14 | - | – | |
| Phobius | 1 | 14 | 14 | - | – | |
| Phobius | 1 | 1 | 1 | - | – | |
| Phobius | 2 | 9 | 8 | - | – | |
| Phobius | 10 | 14 | 5 | - | – | |
| Phobius | 15 | 387 | 373 | - | – | |
| PANTHER | 27 | 387 | 361 | 5.4E-195 | – | |
| PANTHER | 27 | 387 | 361 | 5.4E-195 | – | |
| SUPERFAMILY | 76 | 233 | 158 | 1.35E-37 | ||
| CDD | 79 | 383 | 305 | 6.18655E-112 | – | |
| SMART | 88 | 383 | 296 | 8.8E-13 | ||
| Gene3D | 91 | 383 | 293 | 3.9E-108 | – | |
| Pfam | 107 | 169 | 63 | 1.5E-9 | ||
| SUPERFAMILY | 201 | 324 | 124 | 1.66E-26 | ||
| Gene3D | 219 | 333 | 115 | 3.9E-108 | – | |
| ProSitePatterns | 228 | 249 | 22 | - | ||
| Pfam | 272 | 383 | 112 | 6.3E-18 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi4g1v0166000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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