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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0176500 |
| Transcript ID | LotjaGi4g1v0176500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Formin-like protein; TAIR: AT1G70140.1 formin 8; Swiss-Prot: sp|O04532|FH8_ARATH Formin-like protein 8; TrEMBL-Plants: tr|I1KXL9|I1KXL9_SOYBN Formin-like protein; Found in the gene: LotjaGi4g1v0176500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:35864777..35868813) extracted from Lotus japonicus Gifu genome v1.2.
CTTCAGAATCTTTAATGTAAGAGGAGTTGTTAGATTTTAAGTTGCAAACAACAACTAAGTCAAAACTCAGAAGACTGTGA CAAGTTTTTTTGGGCAAATTACAAAAACATTTTTGAACAATAGCACCACTTCACACGTGTGCCTTAATTTATTTACTTTT AAACAAGTATCCACCTCTGATAATAATAACTTAATTTCTTATGGTGATATTGTTATCAAGTGGTAAGCCAGCAGGTAACG AAACATGTTCAATTCCGATGGACAAGAATCAAATTCCTAACATTATGGTTAAGAGATGAGGTGAACAATCATCACAATTC ACAGTTGTGCCTTAATTATATGTTTGACTATGTATACCAGTCCCTTTCAACCGAGCTGCACCGCAAGCCCCAATTATGAC TCAAGCAACCACCAACTCTTCCTTTGCAAGTAACAAATCATCACTCATCCGCATTGTCAATACTCTATCCAATCCAGCTC GGAAAGCCAACAAGAATCAACCGCTTCAACTCTTTTGAAAAGCAAACAAAACCAAAAGCATAAGACAAAGAAGGACAAAA TTGCAGTTACCAATGAACAGAGAAAGTACAACCCAAGATTTGTTCTCACAAGCCTTTTCTCTCCTTTCATGGCTTTGAAT ATGATGCTTCAATCATGGTTAGTTTTGAGCCTTGTTTTAGTACTAGACGGTTTATCAGTACCAACCTGTCACTGCCAGAC GAACATTGAAACTTTCTACCCCAATGAAACTTCAGCACCAGCCCCGGCAACACAACCGCCGGAGCCGCCACCACTACCAC CACCAACACAAGGGCAGGCTCCGGGACCAGTGGTGGCGTCCCGGAGTACTTCATCGAATGGTAAGATCGCAAAGGCGGTG GCTGTAACTGCAGCAAGCACTTTGGTTGCTTGTGTTTTAATGTTCATTTTAGTCCAGAGGTGCTTAAGGGGAAGAAGAAA AAGAAAGGAAATCATGGTGAGTAACACTGGTGGTTCTGGTGGAGATAGGCGTGTTGTTCCTCAGGGAAATGCGTTTGAAC GAATTGATGGGAATGTCAGGGGACTGATTGTTGATGAGGATGGTTTGGATGTGGTTTATTGGAGAAAACTTGAAGGGAAA AACAACAACAACAACATGGATCTTCATAAGGAGGTCTTGCAAAGTCCCAAAAATGAAGAAGGAATAGAAGATGATCAACG TCAAGGGAAAAAAAATATCAAGTTCATCCAAGAAATTCCTCTGCTTCGTGGGAAATCTTCATCTTCCCACATGAAGATAT CTCCAGAAGAGGATCAGCCATGTAGATTTGCAACAATTCCCTCTCCTCTTCCTTCATCTTCTTCTGTTCCTCGGGTATTA GGTGGAGTTGCTATCAAGGGTGTTCAGGAACCAGATTCTCCTTCTCAACCATCCACTCCACCCCCTCCAATTTCGCCATC AACACCATCCCCCATTTCTTTTCCAGCACCACCTGTCCCTCCTTCAATCCCAGCTAGACAGAGTCCAACACCACCTCCTC CGACGACGAAGACAGGTGCTTCGAATTCATCATCAAAAACACCACCTGGTCCCATTGAAATGCCAGTTATCTCCACCAGC AAGCAAGGAGACTCTTCAGGGAAAGGCATGCCAGAAACAAGCAATGATCAAGTGAAGCTGAAGCCTTTGCATTGGGATAA GGTGAATACTAATGCTGATCACTCCATGGTTTGGGACAAAGTTGATCGTGGATCTTTCAGGTAATCCTAAATTCCTTACT ATTACATCTGTAATGTCTGATCCATATTAAAAATATCGGCTAGTTTTACGTTGCCAGCCGAAGTCCTTACACAAAATCCT CCTCCTTTACCCAGACTTGGGACCGGCTATGCGCATACGCGCGGAGTTGTAATCTTAAATTCTTAAATGTGTTAAATTTT GTTAAACAAATGTGTTTATTTATCACACTAGGTAGAATTTACTGATCATTCCATTTCATGTTTTGTTAATACAATATTTC AGTGTGGATCAAGATCTTATGGAAGCTCTCTTTGGTTATGTGGCCACGAACCGAAGATCCCCAAAAGGAAAGAATCACTC AACAAGTCCAAGCAGGGATACCTCTGCTCCATCAACAAAAATATTCCTTCTTGACCAGAGAAAATCACAGAACATTTCTA TTATATTGAAATCTCTTGCAGTCTCACAAGGTGAAATTCTTGATGCGCTCGGCGATGGTAAAGGCCTCAACATGGAAACC CTTGAAAAGCTATCTAGAGTTTCCACAGCAGAAGAAGAGCAATCACTGATCCTTCAATACAAAGGAGACCCAGCAAGACT TGCTGCAGCTGAGTCTTTCATCTATCACATCCTTAAAGCGGTTCCTTCAGCATTCAAGCGCTTGAATGCGATGTTGTTCA GATTGAACTATGATTATGAGATTCTAGAAATCAAGGAATCTCTACAGACCATTGAACTGGGGTGTAAGGAGCTTAAAAGC CATGGAATCTTTGCGAAGCTTCTTGAAGCAGTGCTTAAGGCAGGAAATAGAATGAATGCAGGAACTGCTAGAGGTAATGC TCAAGCTTTTAACTTGGATTCTCTAAGAAAGCTTTCTGATGTCAAGAGCAGCAATGGAAATACCACATTACTTCACTTTG TGGTTGAAGAGGTAGTTCGTTCGGAAGGAAAACGTGTTGTTCTGAACCGCAATCACAGCCTGAGCCGTAGTAGTAGCAGT AGGAGTACTAGCAACATCAGCGGAGACTCCACGAGCAATGCTGCTTCAAATGGAGAAAGAGAAAGGGAATTTACAAAGCT AGGATTGCCAATTGTAGGAGGGATCAGTTCTGAGTTGTCAAACGTTAAGAAAGCATCACATATAGATTACAACAGTATAG TTGGTTCAATCTCAGCCCTCTCAACGCGGCTAGTTGAAATTCAAGAACTTGTTTCTCAGTGTGGAAATAGTGAAGGAGAT TGTTTTGCAAAAGAAATGAACCATTTTCTCCGAAATGCTGAACAAGAATTGAAATTAGTGAGGGACAAAGAAGCAAGCAC ATTGCAGCTTGTCCATAGAACAACACAATATTATCAAGTAGTGGCTTCAAAAGACAATGCAGCACAAAGTCTCAAACTAT TTGTTATAGTAAAGGATTTTATGGGGATGGTTGATCAAGCTTGCATTGAGATTGCGCGTGACATGCAGAAGAGGAAGACC CTCAAGTAAATTTTTGGCTAATCACCAGAAGAGTAATAGAAAGAAGTCATGAGATTATCTGATTCTAATAATCTCAGCGA ATCTAATTCACGACTCAGTCTATTTCGGCTTATATAACTCTAATAATGGCCTAAGTGATTTAACTCTTACTCAAGTTCTG ATGGCACCAGAAGAGTTTGTGAATCAGGAAATCAAAGAAAAGTGCTACTTCTAACCTTTACAAGTTCAGAAGTGCTTGAA AGCAGGCTACGATTTACAATTCAGAAGCCGAAAGCATGTTGGTGATGTTGCCATTTTTCCACTCCTGCAAGTCTAAAGTA TAAAGAACTATATTAGCCCTCGTTTAATTTTAATTACCGTGTACATCATTATTGAATTGTTGGATTCTTTTAGCATCAAC CAGAACTTGGTTGTCTACCTCTGACTTCCTGTTATACTTGTACATAACATGTTGGTCAATTTTTAATTTTTTTTCGCTAA ATGGATTTTAGAAAAAGTCATCAAGCGCAACCAATTGCCAATTGGCATATCTCAGAGGTCATTGAAGAGGTCAAATGCAA AACAGGGTTGACTTTATGAAGAACCGAAATAATGTCATCAATGATATGACTTTAGATTAGAAGGAAGGAATCAGTACATG TGTCGCATTTATTCTTCCTATAGGGTTAATATTTAATAATATATTTGATGTATATTGATGAGCAATATTTTACCCACTTT TCATAGCCTTAAGTAGTTGAATTCCCGTGCACTGCACGGGTTACTTTATCATTAAATTTGTGTAGTATTATCTTTTTTTA AGTTTTGTAATTTTAATTGCACAAATATTTTTTAAAT
CDS sequence (LotjaGi4g1v0176500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTTGAATATGATGCTTCAATCATGGTTAGTTTTGAGCCTTGTTTTAGTACTAGACGGTTTATCAGTACCAACCTG TCACTGCCAGACGAACATTGAAACTTTCTACCCCAATGAAACTTCAGCACCAGCCCCGGCAACACAACCGCCGGAGCCGC CACCACTACCACCACCAACACAAGGGCAGGCTCCGGGACCAGTGGTGGCGTCCCGGAGTACTTCATCGAATGGTAAGATC GCAAAGGCGGTGGCTGTAACTGCAGCAAGCACTTTGGTTGCTTGTGTTTTAATGTTCATTTTAGTCCAGAGGTGCTTAAG GGGAAGAAGAAAAAGAAAGGAAATCATGGTGAGTAACACTGGTGGTTCTGGTGGAGATAGGCGTGTTGTTCCTCAGGGAA ATGCGTTTGAACGAATTGATGGGAATGTCAGGGGACTGATTGTTGATGAGGATGGTTTGGATGTGGTTTATTGGAGAAAA CTTGAAGGGAAAAACAACAACAACAACATGGATCTTCATAAGGAGGTCTTGCAAAGTCCCAAAAATGAAGAAGGAATAGA AGATGATCAACGTCAAGGGAAAAAAAATATCAAGTTCATCCAAGAAATTCCTCTGCTTCGTGGGAAATCTTCATCTTCCC ACATGAAGATATCTCCAGAAGAGGATCAGCCATGTAGATTTGCAACAATTCCCTCTCCTCTTCCTTCATCTTCTTCTGTT CCTCGGGTATTAGGTGGAGTTGCTATCAAGGGTGTTCAGGAACCAGATTCTCCTTCTCAACCATCCACTCCACCCCCTCC AATTTCGCCATCAACACCATCCCCCATTTCTTTTCCAGCACCACCTGTCCCTCCTTCAATCCCAGCTAGACAGAGTCCAA CACCACCTCCTCCGACGACGAAGACAGGTGCTTCGAATTCATCATCAAAAACACCACCTGGTCCCATTGAAATGCCAGTT ATCTCCACCAGCAAGCAAGGAGACTCTTCAGGGAAAGGCATGCCAGAAACAAGCAATGATCAAGTGAAGCTGAAGCCTTT GCATTGGGATAAGGTGAATACTAATGCTGATCACTCCATGGTTTGGGACAAAGTTGATCGTGGATCTTTCAGTGTGGATC AAGATCTTATGGAAGCTCTCTTTGGTTATGTGGCCACGAACCGAAGATCCCCAAAAGGAAAGAATCACTCAACAAGTCCA AGCAGGGATACCTCTGCTCCATCAACAAAAATATTCCTTCTTGACCAGAGAAAATCACAGAACATTTCTATTATATTGAA ATCTCTTGCAGTCTCACAAGGTGAAATTCTTGATGCGCTCGGCGATGGTAAAGGCCTCAACATGGAAACCCTTGAAAAGC TATCTAGAGTTTCCACAGCAGAAGAAGAGCAATCACTGATCCTTCAATACAAAGGAGACCCAGCAAGACTTGCTGCAGCT GAGTCTTTCATCTATCACATCCTTAAAGCGGTTCCTTCAGCATTCAAGCGCTTGAATGCGATGTTGTTCAGATTGAACTA TGATTATGAGATTCTAGAAATCAAGGAATCTCTACAGACCATTGAACTGGGGTGTAAGGAGCTTAAAAGCCATGGAATCT TTGCGAAGCTTCTTGAAGCAGTGCTTAAGGCAGGAAATAGAATGAATGCAGGAACTGCTAGAGGTAATGCTCAAGCTTTT AACTTGGATTCTCTAAGAAAGCTTTCTGATGTCAAGAGCAGCAATGGAAATACCACATTACTTCACTTTGTGGTTGAAGA GGTAGTTCGTTCGGAAGGAAAACGTGTTGTTCTGAACCGCAATCACAGCCTGAGCCGTAGTAGTAGCAGTAGGAGTACTA GCAACATCAGCGGAGACTCCACGAGCAATGCTGCTTCAAATGGAGAAAGAGAAAGGGAATTTACAAAGCTAGGATTGCCA ATTGTAGGAGGGATCAGTTCTGAGTTGTCAAACGTTAAGAAAGCATCACATATAGATTACAACAGTATAGTTGGTTCAAT CTCAGCCCTCTCAACGCGGCTAGTTGAAATTCAAGAACTTGTTTCTCAGTGTGGAAATAGTGAAGGAGATTGTTTTGCAA AAGAAATGAACCATTTTCTCCGAAATGCTGAACAAGAATTGAAATTAGTGAGGGACAAAGAAGCAAGCACATTGCAGCTT GTCCATAGAACAACACAATATTATCAAGTAGTGGCTTCAAAAGACAATGCAGCACAAAGTCTCAAACTATTTGTTATAGT AAAGGATTTTATGGGGATGGTTGATCAAGCTTGCATTGAGATTGCGCGTGACATGCAGAAGAGGAAGACCCTCAAGTAA
Protein sequence (LotjaGi4g1v0176500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALNMMLQSWLVLSLVLVLDGLSVPTCHCQTNIETFYPNETSAPAPATQPPEPPPLPPPTQGQAPGPVVASRSTSSNGKI AKAVAVTAASTLVACVLMFILVQRCLRGRRKRKEIMVSNTGGSGGDRRVVPQGNAFERIDGNVRGLIVDEDGLDVVYWRK LEGKNNNNNMDLHKEVLQSPKNEEGIEDDQRQGKKNIKFIQEIPLLRGKSSSSHMKISPEEDQPCRFATIPSPLPSSSSV PRVLGGVAIKGVQEPDSPSQPSTPPPPISPSTPSPISFPAPPVPPSIPARQSPTPPPPTTKTGASNSSSKTPPGPIEMPV ISTSKQGDSSGKGMPETSNDQVKLKPLHWDKVNTNADHSMVWDKVDRGSFSVDQDLMEALFGYVATNRRSPKGKNHSTSP SRDTSAPSTKIFLLDQRKSQNISIILKSLAVSQGEILDALGDGKGLNMETLEKLSRVSTAEEEQSLILQYKGDPARLAAA ESFIYHILKAVPSAFKRLNAMLFRLNYDYEILEIKESLQTIELGCKELKSHGIFAKLLEAVLKAGNRMNAGTARGNAQAF NLDSLRKLSDVKSSNGNTTLLHFVVEEVVRSEGKRVVLNRNHSLSRSSSSRSTSNISGDSTSNAASNGEREREFTKLGLP IVGGISSELSNVKKASHIDYNSIVGSISALSTRLVEIQELVSQCGNSEGDCFAKEMNHFLRNAEQELKLVRDKEASTLQL VHRTTQYYQVVASKDNAAQSLKLFVIVKDFMGMVDQACIEIARDMQKRKTLK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 30 | 30 | - | – | |
| Phobius | 1 | 6 | 6 | - | – | |
| Phobius | 1 | 29 | 29 | - | – | |
| SignalP_EUK | 1 | 21 | 21 | - | – | |
| Phobius | 7 | 19 | 13 | - | – | |
| PANTHER | 10 | 770 | 761 | 0.0 | – | |
| PANTHER | 10 | 770 | 761 | 0.0 | – | |
| Phobius | 20 | 29 | 10 | - | – | |
| Phobius | 30 | 79 | 50 | - | – | |
| MobiDBLite | 38 | 73 | 36 | - | – | |
| MobiDBLite | 44 | 64 | 21 | - | – | |
| Phobius | 80 | 102 | 23 | - | – | |
| TMHMM | 80 | 102 | 23 | - | – | |
| Phobius | 103 | 772 | 670 | - | – | |
| MobiDBLite | 251 | 347 | 97 | - | – | |
| MobiDBLite | 258 | 300 | 43 | - | – | |
| MobiDBLite | 322 | 337 | 16 | - | – | |
| SMART | 331 | 769 | 439 | 1.2E-94 | ||
| Gene3D | 332 | 619 | 288 | 2.8E-65 | ||
| ProSiteProfiles | 334 | 772 | 439 | 46.779 | ||
| Pfam | 338 | 754 | 417 | 8.6E-102 | ||
| SUPERFAMILY | 347 | 769 | 423 | 6.67E-79 | – | |
| MobiDBLite | 388 | 408 | 21 | - | – | |
| MobiDBLite | 390 | 408 | 19 | - | – | |
| MobiDBLite | 600 | 630 | 31 | - | – | |
| MobiDBLite | 600 | 628 | 29 | - | – | |
| Gene3D | 631 | 772 | 142 | 9.8E-16 | ||
| Coils | 693 | 713 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0176500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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