Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0176800 |
| Transcript ID | LotjaGi4g1v0176800.2 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine-protein phosphatase; TAIR: AT1G10430.1 protein phosphatase 2A-2; Swiss-Prot: sp|Q9ZSE4|PP2A_HEVBR Serine/threonine-protein phosphatase PP2A catalytic subunit; TrEMBL-Plants: tr|Q9MB06|Q9MB06_VICFA Serine/threonine-protein phosphatase; Found in the gene: LotjaGi4g1v0176800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:35937510..35941781) extracted from Lotus japonicus Gifu genome v1.2.
AATCATTCGAGTAATCCACAAATAAGGTAATTTTTTATGTCTTACATTTTTATTTTTATTTTTTTCTTAAATATTTGATT GTCTTGTTGTTGTTGTTCCCGTCTCACTGAGAAACACAAAACTGTAGAGACGAAAGAGAAAACTGGGGGAATGATTGGGA GACCTAAACCATCAACGCCATCTCCTAAACGGTGCGTTTCGCTCTCTTCGCTTTGCCTCTGAACCTAACCCTAACCCTAC ATTTTTCCGGTCGCCGTCAACGACGAAACCAGTAACCGTTCGATTTCATAGATTCGGCGATTCGAGATCAGATCGGTCTG GGTGGTGGAAACGATGCCGTCTCACGCGGATCTGGACCGTCAAATCGAGCACCTGATGGAGTGCAAGCCTCTGCCGGAGC AAGAGGTGAAGGCGCTGTGCGATCAGGCGAGGGCGATTCTTGTTGAGGAGTGGAACGTGCAACCGGTCAAGTGCCCCGTC ACGGTTTGCGGCGATATTCACGGCCAGTTCTACGATCTCATCGAGTTGTTTCGGATAGGAGGGAGCGCCCCTGATACCAA TTACCTATTTATGGGTGATTATGTAGGTGAGTTTTTTTCTATTAGTGCTCAAAGATTGGATTTTTATTCGCTCTTTAGGT TAACCTTATTTGTAATTTGTAATTGAAATTGAATTTTTATTAGCTAGATCTTGGTATGAGTGCGTAGTTATTAATGGAGA AATGCTGAGATATGAATGTTAGTGTTGTAAATGGAGTTAATTTGATTGTTGTAGTTTTCTATGTAATTTTTTTTCTGTAT ATATCTGAAGAAGTGAAGCATTGTTCCTCAAACTGCTGATGGACAAATGAAAATTTAAATTTGTATATTTTTAGGACATG TATCAGTGAGGAGTGAAACTCTCTGATGCCCACGGACAGTTCTTTGATATTTTGATGAGAACATACAAAAGTAGCACATT TGGTCGTTCTGTTTGAGCTTACATTTAAGCATCCAAACTGGGTGTGATATTAATTCCCCTCCTCCACAAAAAAAAAAGAG AAACTTGGTACTTTTTGAGTTTTGAAAGATACAATTCTTTTGGCTTTTCTAATTTCTTATGGAAACTAAATTACGCCTCT AAGGAAAAGTTGTTTAGCTTTATTCTCCTATCCTCTAAAATTTCATAGAAGGACGTCAGGCTTACAAACTCTTATGGTAT GGAGACATTAAAAAATTCATATATAATAAGGTGCTGCCCTCTGAATCGCCAATACACGATTTTCTTTGACACTTTCTACG TTGGATACGTGTCTGATACCAGTATATGCTTGGATACATAACCAAAGCATATTTGTGACGTTCCAAAGCCAGTTTCTTAA AAGAATATTGTCTAAATTCTGTACGGCCTGGATACTTCTACGATATTTATTCTAAAACATGACTCTTCTAATCTTTTCTC CTTTGCCTATATCTTTGAACCAAACCAGCATTCCAGCATAACGTGTAGCAAAATCTCATCTATAACATCTTTACAGATGG TGCTCAAGAAGTGGATGGGATTTATATTGTTCCTGTCTGTAGGCAATAGTAATGATTTCTGCTGATATTGGTTTATAATT TCTCCTTTGTATTTTGTAATGTTTGCAAAGTATATAAATAGTTAGATTTTATTGAATTGTATTTATGTATTTATTATGTT TTATAATTTTTAATGCATATCTATATATTTATCCTTGATGTATGCTATATTTTTTCAAGAAGTATCCCATACCATTTGAC GGATTTGTATTTTTATCTGCCGCATCGTTATTCACGCATAATTATTATCTTTGGTTTTTATCATCTCTCCTTTGTGATAC GGCTTTTAATGATTTTCAAATTATTAAGGTCATGCCAAACTGCTGGAATTTTCTCATGACATTGGTTAATTAATGCAGAT CGTGGGTACTATTCAGTGGAGACTGTTTCACTTCTGGTGGCCTTGAAAGTCCGTTACAGAGATAGAATTACATTAACCAG GGGAAATCATGAAAGCCGTCAAATTACTCAAGTGTATGAGTTCTTCTTATTCTAAGTTTTGTAAGGTCTATCATGTTTAA ACTGAAGATTTAATATTCAGCGTAAAATTTTGAAAAGAGGTCATGGGTTTTGCAGCCCCAATGCCTCTAAATAGTGGGCT TTGCTTACGCTATAGAGTTCACTTGTCTGTGCACCATCTTTCCAGAGGGTAACATTGAAGGGCTTAAGAGCAACAATCTG GTTTTGTAATGGGACAGGCCATAATTCTCTTGGTTTGCCTTATCATTATGCTGACTTGATATTTAATTCTAGGGTATTGA ATTAGAATTATAAGATTAAGATGATATATATACTTTGTCGCTTTGAGGCGCTGTCTATCATATGCTGAGGGTGCTATGTT ACATATTTTCCGTAACTTTAAGAATGTTCCATATTGTTTCACAGTTATGTGTGACAGAATGATGTATTGTTTCACATTTT AAGAGGCGCATTTGAATGATGCCTGTTAAGAGTTAACTGTACTGATTCATCAATGGTTTGACAGAAATGTAAAATGACAA GAAACAAAATGTCTATGGACAAAAGATTTTTCTAATTTATAGATGTTTGTATGTATTTCCATGCAATTTCATCAATATCT TTCACCTTCTGCTTTCAGGTACGGCTTCTATGATGAGTGCTTGAGAAAATACGGAAATGCGAATGTCTGGAAATACTTTA CTGACTTGTTTGATTATTTACCTCTGACTGCCCTTATTGAGAGTCAGGTTTGAGTTCAATATATTGCAGAGTATTCATCT GAGTAATTTTATCCAAACCTTTAACTTCCTTGTATGTTTCAGATTTTCTGCTTGCATGGAGGTCTCTCACCTTCGTTGGA TACACTGGATAACATCAGAGCATTGGATCGTATACAGGAGGTCTGTGTGTAATGGCTAGCATGAATGTTCTGCATGGTCT CATGATCCATTTGATATTAAGAACATTTTTCATGTGAAAAATTGTATCTTGAGCGAGATATACATCTATTGTTTAATATG GTTTGAGAAATATTTAATTTTATGATGCATTTGTGCTTTGTAATACTCTTGTTTTGCTCTGGAATTTTTTTATTTCGGAC CTACAATAAATAAAAGATTTTTCTTTCTTTTTAGTTTACTGAAATTTTAATACGTTGTTGGCCTTGACAGGTTTATTAGG CTTTTAGGCTGTCTCTTCTTTTAGACCAAAATTGAATGCCACTCCTTAACATTTGTACTGTCAATACAGTTTATGAGGTT AATTGGGTGCGAGGGATTTGTTGCACCTATGTTGCCTAACAATCGTACTTGTGCATTACAGGTTCCGCATGAAGGACCGA TGTGTGATCTCTTGTGGTCTGATCCTGATGATCGGTGTGGGTGGGGAATATCTCCACGTGGTGCTGGATACACATTTGGA CAGGATATAGCTGCTCAGTTCAATCATACCAATGGTCTCTCTCTGATATCTAGAGCTCACCAGCTTGTTATGGAAGGATA CAATTGGTGCCAGGTGACTGACAAATATATTTAACGACTATAATTATCATTTTCTGCATTGGGAGTACCTTTGGATTATA TATAATGTATTATGTATTGACTTATGCTGATTACTCTATTAGGAGAAGAATGTGGTGACTGTATTTAGTGCTCCAAATTA CTGTTACCGATGTGGGAATATGGCTGCCATACTGGAAATTGGAGAGAATATGGATCAGAATTTTCTTCAGTTTGATCCTG CTCCCAGGCAAATTGAGCCTGACACTACGCGCAAGACCCCAGATTATTTTTTGTAACTTCATATATATGCCTATGTGTAG TTACTGCTTTCTGCCGTTACTGTAGATGTGTCTTCAAGGAAAAGGAGTTTCATTGTTTTAAGAGGAGGGTGGTCATCAAC ATAATTCTTTGTTTTTGGAGTTTATCTAATGCTGCTGCCTTATTTGCACAAGAAACCAATAGGAGAACTGACACAAGCAA CTAATTGGTGTTGTATATTTTTGAGAGGAGGAAGCGGCGATATAACATGGTATATCTTGTTTTGTGATTTTTTTCCCTTG AATTAAATCTCTAGTTAGAGAGCAGATTTTGTGTCCTGACAATGATGTGCTGAGACTTTTGAACGGTGCTGGTGTTCTTT TTACATTACTATATCTTGGTAAATGTTAAGTTGGGGTGATGAATTGAGACTCAGAAAATTAGGAACCTCGAAGACTTATA ATTTGAACCAAAAGAGTTTGTCAAATCGTGGT
CDS sequence (LotjaGi4g1v0176800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCGTCTCACGCGGATCTGGACCGTCAAATCGAGCACCTGATGGAGTGCAAGCCTCTGCCGGAGCAAGAGGTGAAGGC GCTGTGCGATCAGGCGAGGGCGATTCTTGTTGAGGAGTGGAACGTGCAACCGGTCAAGTGCCCCGTCACGGTTTGCGGCG ATATTCACGGCCAGTTCTACGATCTCATCGAGTTGTTTCGGATAGGAGGGAGCGCCCCTGATACCAATTACCTATTTATG GGTGATTATGTAGATCGTGGGTACTATTCAGTGGAGACTGTTTCACTTCTGGTGGCCTTGAAAGTCCGTTACAGAGATAG AATTACATTAACCAGGGGAAATCATGAAAGCCGTCAAATTACTCAAGTGTACGGCTTCTATGATGAGTGCTTGAGAAAAT ACGGAAATGCGAATGTCTGGAAATACTTTACTGACTTGTTTGATTATTTACCTCTGACTGCCCTTATTGAGAGTCAGATT TTCTGCTTGCATGGAGGTCTCTCACCTTCGTTGGATACACTGGATAACATCAGAGCATTGGATCGTATACAGGAGGTTCC GCATGAAGGACCGATGTGTGATCTCTTGTGGTCTGATCCTGATGATCGGTGTGGGTGGGGAATATCTCCACGTGGTGCTG GATACACATTTGGACAGGATATAGCTGCTCAGTTCAATCATACCAATGGTCTCTCTCTGATATCTAGAGCTCACCAGCTT GTTATGGAAGGATACAATTGGTGCCAGGAGAAGAATGTGGTGACTGTATTTAGTGCTCCAAATTACTGTTACCGATGTGG GAATATGGCTGCCATACTGGAAATTGGAGAGAATATGGATCAGAATTTTCTTCAGTTTGATCCTGCTCCCAGGCAAATTG AGCCTGACACTACGCGCAAGACCCCAGATTATTTTTTGTAA
Protein sequence (LotjaGi4g1v0176800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPSHADLDRQIEHLMECKPLPEQEVKALCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGSAPDTNYLFM GDYVDRGYYSVETVSLLVALKVRYRDRITLTRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQI FCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIAAQFNHTNGLSLISRAHQL VMEGYNWCQEKNVVTVFSAPNYCYRCGNMAAILEIGENMDQNFLQFDPAPRQIEPDTTRKTPDYFL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 306 | 306 | 8.0E-220 | – | |
| PANTHER | 1 | 306 | 306 | 8.0E-220 | – | |
| Gene3D | 2 | 303 | 302 | 3.0E-130 | ||
| CDD | 6 | 290 | 285 | 0.0 | – | |
| SUPERFAMILY | 6 | 293 | 288 | 5.45E-117 | – | |
| SMART | 20 | 290 | 271 | 2.1E-151 | ||
| Pfam | 48 | 239 | 192 | 5.0E-36 | ||
| PRINTS | 48 | 75 | 28 | 7.8E-91 | ||
| PRINTS | 77 | 104 | 28 | 7.8E-91 | ||
| PRINTS | 110 | 134 | 25 | 7.8E-91 | ||
| PRINTS | 145 | 171 | 27 | 7.8E-91 | ||
| PRINTS | 174 | 201 | 28 | 7.8E-91 | ||
| PRINTS | 230 | 250 | 21 | 7.8E-91 | ||
| PRINTS | 252 | 268 | 17 | 7.8E-91 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi4g1v0176800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…