Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0176800 |
| Transcript ID | LotjaGi4g1v0176800.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine-protein phosphatase; TAIR: AT1G10430.1 protein phosphatase 2A-2; Swiss-Prot: sp|Q9ZSE4|PP2A_HEVBR Serine/threonine-protein phosphatase PP2A catalytic subunit; TrEMBL-Plants: tr|A0A0R0KRC0|A0A0R0KRC0_SOYBN Serine/threonine-protein phosphatase; Found in the gene: LotjaGi4g1v0176800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:35938208..35941448) extracted from Lotus japonicus Gifu genome v1.2.
ATGCCGTCTCACGCGGATCTGGACCGTCAAATCGAGCACCTGATGGAGTGCAAGCCTCTGCCGGAGCAAGAGGTGAAGGC GCTGTGCGATCAGGCGAGGGCGATTCTTGTTGAGGAGTGGAACGTGCAACCGGTCAAGTGCCCCGTCACGGTTTGCGGCG ATATTCACGGCCAGTTCTACGATCTCATCGAGTTGTTTCGGATAGGAGGGAGCGCCCCTGATACCAATTACCTATTTATG GGTGATTATGTAGGTGAGTTTTTTTCTATTAGTGCTCAAAGATTGGATTTTTATTCGCTCTTTAGGTTAACCTTATTTGT AATTTGTAATTGAAATTGAATTTTTATTAGCTAGATCTTGGTATGAGTGCGTAGTTATTAATGGAGAAATGCTGAGATAT GAATGTTAGTGTTGTAAATGGAGTTAATTTGATTGTTGTAGTTTTCTATGTAATTTTTTTTCTGTATATATCTGAAGAAG TGAAGCATTGTTCCTCAAACTGCTGATGGACAAATGAAAATTTAAATTTGTATATTTTTAGGACATGTATCAGTGAGGAG TGAAACTCTCTGATGCCCACGGACAGTTCTTTGATATTTTGATGAGAACATACAAAAGTAGCACATTTGGTCGTTCTGTT TGAGCTTACATTTAAGCATCCAAACTGGGTGTGATATTAATTCCCCTCCTCCACAAAAAAAAAAGAGAAACTTGGTACTT TTTGAGTTTTGAAAGATACAATTCTTTTGGCTTTTCTAATTTCTTATGGAAACTAAATTACGCCTCTAAGGAAAAGTTGT TTAGCTTTATTCTCCTATCCTCTAAAATTTCATAGAAGGACGTCAGGCTTACAAACTCTTATGGTATGGAGACATTAAAA AATTCATATATAATAAGGTGCTGCCCTCTGAATCGCCAATACACGATTTTCTTTGACACTTTCTACGTTGGATACGTGTC TGATACCAGTATATGCTTGGATACATAACCAAAGCATATTTGTGACGTTCCAAAGCCAGTTTCTTAAAAGAATATTGTCT AAATTCTGTACGGCCTGGATACTTCTACGATATTTATTCTAAAACATGACTCTTCTAATCTTTTCTCCTTTGCCTATATC TTTGAACCAAACCAGCATTCCAGCATAACGTGTAGCAAAATCTCATCTATAACATCTTTACAGATGGTGCTCAAGAAGTG GATGGGATTTATATTGTTCCTGTCTGTAGGCAATAGTAATGATTTCTGCTGATATTGGTTTATAATTTCTCCTTTGTATT TTGTAATGTTTGCAAAGTATATAAATAGTTAGATTTTATTGAATTGTATTTATGTATTTATTATGTTTTATAATTTTTAA TGCATATCTATATATTTATCCTTGATGTATGCTATATTTTTTCAAGAAGTATCCCATACCATTTGACGGATTTGTATTTT TATCTGCCGCATCGTTATTCACGCATAATTATTATCTTTGGTTTTTATCATCTCTCCTTTGTGATACGGCTTTTAATGAT TTTCAAATTATTAAGGTCATGCCAAACTGCTGGAATTTTCTCATGACATTGGTTAATTAATGCAGATCGTGGGTACTATT CAGTGGAGACTGTTTCACTTCTGGTGGCCTTGAAAGTCCGTTACAGAGATAGAATTACATTAACCAGGGGAAATCATGAA AGCCGTCAAATTACTCAAGTGTATGAGTTCTTCTTATTCTAAGTTTTGTAAGGTCTATCATGTTTAAACTGAAGATTTAA TATTCAGCGTAAAATTTTGAAAAGAGGTCATGGGTTTTGCAGCCCCAATGCCTCTAAATAGTGGGCTTTGCTTACGCTAT AGAGTTCACTTGTCTGTGCACCATCTTTCCAGAGGGTAACATTGAAGGGCTTAAGAGCAACAATCTGGTTTTGTAATGGG ACAGGCCATAATTCTCTTGGTTTGCCTTATCATTATGCTGACTTGATATTTAATTCTAGGGTATTGAATTAGAATTATAA GATTAAGATGATATATATACTTTGTCGCTTTGAGGCGCTGTCTATCATATGCTGAGGGTGCTATGTTACATATTTTCCGT AACTTTAAGAATGTTCCATATTGTTTCACAGTTATGTGTGACAGAATGATGTATTGTTTCACATTTTAAGAGGCGCATTT GAATGATGCCTGTTAAGAGTTAACTGTACTGATTCATCAATGGTTTGACAGAAATGTAAAATGACAAGAAACAAAATGTC TATGGACAAAAGATTTTTCTAATTTATAGATGTTTGTATGTATTTCCATGCAATTTCATCAATATCTTTCACCTTCTGCT TTCAGGTACGGCTTCTATGATGAGTGCTTGAGAAAATACGGAAATGCGAATGTCTGGAAATACTTTACTGACTTGTTTGA TTATTTACCTCTGACTGCCCTTATTGAGAGTCAGGTTTGAGTTCAATATATTGCAGAGTATTCATCTGAGTAATTTTATC CAAACCTTTAACTTCCTTGTATGTTTCAGATTTTCTGCTTGCATGGAGGTCTCTCACCTTCGTTGGATACACTGGATAAC ATCAGAGCATTGGATCGTATACAGGAGGTCTGTGTGTAATGGCTAGCATGAATGTTCTGCATGGTCTCATGATCCATTTG ATATTAAGAACATTTTTCATGTGAAAAATTGTATCTTGAGCGAGATATACATCTATTGTTTAATATGGTTTGAGAAATAT TTAATTTTATGATGCATTTGTGCTTTGTAATACTCTTGTTTTGCTCTGGAATTTTTTTATTTCGGACCTACAATAAATAA AAGATTTTTCTTTCTTTTTAGTTTACTGAAATTTTAATACGTTGTTGGCCTTGACAGGTTTATTAGGCTTTTAGGCTGTC TCTTCTTTTAGACCAAAATTGAATGCCACTCCTTAACATTTGTACTGTCAATACAGTTTATGAGGTTAATTGGGTGCGAG GGATTTGTTGCACCTATGTTGCCTAACAATCGTACTTGTGCATTACAGGTTCCGCATGAAGGACCGATGTGTGATCTCTT GTGGTCTGATCCTGATGATCGGTGTGGGTGGGGAATATCTCCACGTGGTGCTGGATACACATTTGGACAGGATATAGCTG CTCAGTTCAATCATACCAATGGTCTCTCTCTGATATCTAGAGCTCACCAGCTTGTTATGGAAGGATACAATTGGTGCCAG GTGACTGACAAATATATTTAACGACTATAATTATCATTTTC
CDS sequence (LotjaGi4g1v0176800.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCGTCTCACGCGGATCTGGACCGTCAAATCGAGCACCTGATGGAGTGCAAGCCTCTGCCGGAGCAAGAGGTGAAGGC GCTGTGCGATCAGGCGAGGGCGATTCTTGTTGAGGAGTGGAACGTGCAACCGGTCAAGTGCCCCGTCACGGTTTGCGGCG ATATTCACGGCCAGTTCTACGATCTCATCGAGTTGTTTCGGATAGGAGGGAGCGCCCCTGATACCAATTACCTATTTATG GGTGATTATGTAGATCGTGGGTACTATTCAGTGGAGACTGTTTCACTTCTGGTGGCCTTGAAAGTCCGTTACAGAGATAG AATTACATTAACCAGGGGAAATCATGAAAGCCGTCAAATTACTCAAGTGTACGGCTTCTATGATGAGTGCTTGAGAAAAT ACGGAAATGCGAATGTCTGGAAATACTTTACTGACTTGTTTGATTATTTACCTCTGACTGCCCTTATTGAGAGTCAGATT TTCTGCTTGCATGGAGGTCTCTCACCTTCGTTGGATACACTGGATAACATCAGAGCATTGGATCGTATACAGGAGGTTCC GCATGAAGGACCGATGTGTGATCTCTTGTGGTCTGATCCTGATGATCGGTGTGGGTGGGGAATATCTCCACGTGGTGCTG GATACACATTTGGACAGGATATAGCTGCTCAGTTCAATCATACCAATGGTCTCTCTCTGATATCTAGAGCTCACCAGCTT GTTATGGAAGGATACAATTGGTGCCAGGTGACTGACAAATATATTTAA
Protein sequence (LotjaGi4g1v0176800.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPSHADLDRQIEHLMECKPLPEQEVKALCDQARAILVEEWNVQPVKCPVTVCGDIHGQFYDLIELFRIGGSAPDTNYLFM GDYVDRGYYSVETVSLLVALKVRYRDRITLTRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQI FCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIAAQFNHTNGLSLISRAHQL VMEGYNWCQVTDKYI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 250 | 250 | 8.0E-177 | – | |
| PANTHER | 1 | 250 | 250 | 8.0E-177 | – | |
| Gene3D | 2 | 254 | 253 | 1.9E-113 | ||
| CDD | 6 | 249 | 244 | 0.0 | – | |
| SUPERFAMILY | 6 | 250 | 245 | 4.75E-97 | – | |
| SMART | 20 | 255 | 236 | 8.5E-110 | ||
| Pfam | 48 | 239 | 192 | 2.8E-36 | ||
| PRINTS | 48 | 75 | 28 | 1.7E-80 | ||
| PRINTS | 77 | 104 | 28 | 1.7E-80 | ||
| PRINTS | 110 | 134 | 25 | 1.7E-80 | ||
| PRINTS | 145 | 171 | 27 | 1.7E-80 | ||
| PRINTS | 174 | 201 | 28 | 1.7E-80 | ||
| PRINTS | 230 | 250 | 21 | 1.7E-80 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi4g1v0176800.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…