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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0199700 |
| Transcript ID | LotjaGi4g1v0199700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nudix family hydrolase; TAIR: AT5G47240.1 nudix hydrolase homolog 8; Swiss-Prot: sp|Q8L7W2|NUDT8_ARATH Nudix hydrolase 8; TrEMBL-Plants: tr|G7JHP2|G7JHP2_MEDTR Nudix family hydrolase; Found in the gene: LotjaGi4g1v0199700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:46236850..46240730) extracted from Lotus japonicus Gifu genome v1.2.
TATTGTTCCTCTTTGTTGACTTGTTGTGAAAATGTTCATCGATTAGAACGTTTGAAAAAAATTTCCTGTCTTGTGTAAGT ATTTATTTAATAGCAGTATTAAATAACCATAGAACCTTAATAGCTAGTAGAATCCTCCGCTATTATTAACAAAAATAAAT AAATAAATAACTCCCGTTGTTTTCTGTATTTATTATCATATATTACAAGTTATGAAAATGAAAGAAACCGAAAGTTTTGA TTTTGTTCTATTTCCAGTTGATATTTTTGTCATGATCACACATCGTTCATTATACACCACTAGTTTACGGGTCACTCATT GGATTGTTAAGCTTCTTAGCATAGCATGATGAATCATCGCTTTAACATGACCAAGACCTGGACCATGATGATGTTTCTAA GTTTCTTTCTTTACTCATAGTTCGATACCTGCTAAGAAAGCCTTGATTTCAGTGAAGATTCGATTCTCTGGTGTATATGT AATAATATATTCAGTCCTCAACGTGATTTCATTGGACTGTGGAGTTGTGGCTAACCGTGCAAGTGTTAGTAGTACGAGGA AAGATAAGATTCGAGAACCAATTCTGCAGACATTGATCCAAACAGACGACACTCTTAGATGGAGTTGAAAACCTTCTCAT CCATTTCAGTGTCTACATTTGAAGTTGGAAGATCTTCCTCCACTTCTCTGTCCAGTTTCAGGCTCAAATTTGGAGTTCAA TTTTCTCCCCACTTTAAGTGCCACAGAGGTAACAACCCAAATTCATTCTCTTGACACTTTTTATGTTTTTTTCTCCTTTT GTTTGGTTTTCCTTTCTGCTGTATACATGCATGAAACTCAGAGTCTAAAGAATCTTTATAGAATTGATTCTGGCAAAATC AACTCCGGGGGGAGTTCTATGAGTAGCTTTTGAGAGTCGGAATTGATTCTAATGAAAAAGAAACTGATCTTCTTTTAGGT TGAGCTGGTTTTGTCAGTAAAACTGAGTACCTGAATTAGTTTTAGCTGATGAATTAGCATTCATGGTTGAGATTTCTAAA ATTGACAATAATGTGGGGAGAGTAAGCATCTCTTGTATATTAATTTCAGGGTTGTTTCTCAGGACTTGTTGTGCCTCGGA TGAGACTTATTATTTGGCAGATAGAGCTGCTGCCATTAGTTCAGCTTCTGCAGAAGCAAGTTCTCACTATGTTAATGGAG TAAATGGCTCAAGTTCTTCAAGTTTCTATTACAGAAATCTTAGAGAGCTTCATGCCTTTGATGATGAGTATGGGGGAGTT ATCATTGACCCACATAGGTTACCATCTGACCCCTATTCCTTTGCACAAGTGCTAGGTTTATCTCTTTATCAGTGGAAAAA GATGGTAAGCCCTCTGTTGATGTTCTGGTCCCCTTAAAATGTTTGGAATTCCTTCTACAATTGATTCTAAAGCCAGAATC AATTTTATGGGGTAGTTTCTGTGAGTAGCTTCTGAGTATCAGAATTGATTCTGAAAATAGAGAAGTTGATCCAATTGTGA TTCTGAAGTTTTTTCCTTTGAAAGTAATTTATATATAACTTCTTCTGTTTGGCAAACATATCTATTATCTTTGAGAGTGG AACCTCTCATGTGAGATTTTCACAAGACAATTGTTGTGTGAAAACTTTGTTTCTTTCACTCTTGATTTATATATCCATTC CCTCTATGATATATCTAGTTTGAGGGGTGGGGGGAAGAGTATTTTCCTTTTCCATTTGATTTTTATTCGTGACTGCATCT GGTGCCTAGCGAAGGAATCATCTTGGACATGGAAACCTAACTAAAGAGTTATGGGATAATTTTCAGGGAAAGAAGGGAAT TTGGCTTAAGCTGCCATTAGAAAAATCTGACCTGGTTCCAATTGCTGTGAAGGTAATTTAACTTCACTTCTCTAAAATGT CATGTTTACTATGCATTAGTTCACAAAATTAACTCAAGAACATGCAAAAAAGGACCAGTAAATTGATCCTCTCATTTGTC TTTATTCAGTTCATTCAAGAGTTTTTGGATTTATGAAGTAACTCATTGTGGTATCAGGAAGGTTTTCAATATCACCATGC TGAGCCAGGATATGTGATGTTAACTTATTGGATTCCAGAAGGACCTTGCATGCTTCCATCGAATGCGTCACATCTAGTAG GAGTTGGAGGATTTGTCATCAATGACAACAATGAAGTATGGTTTCTTCTATAACAAAAAAAAATGATATTCTGCACTTTG CTAAAGCTTTGTTTAAGCCACTAAACGTTCTGTGTTTATTTTATATGACCTCAAAACAGTTCTTATCTAATTTGATTCAT GTAAGAACTGAAGTTTCTATAATTTCCTTCTTGTGATCTTTTAAAGGTGCTTGTAGTGCAAGAGAAACACTGTTCTCCAT CAAATCTTGGCCTTTGGAAGATGCCAACTGGATTCATTCATGAGGTATTGTCCATTTGATTTTCTTAAATGCTCGAGGAA CGAAAAAGAAAAACAAATTAGAGAAGGTGTTAAATTTAAATTTCATTTATGTAATTTTGTTGCAACTTGATTCACTCTCA GGCAGAGGAGATATATGCAGGAGTTGTAAGAGAAGTGAAGGAAGAAACAGGGGTATGTTTGATGGGCTTTGAGATACTCC TCTTGTGTTACTTTACATTGAATTTATTCATGAGATTTTATCACAAGCTTCAATTGCATAAGGTCTTTCTTTTGATGCTT GTTGTTTTAATGTTTCAGATTGAAACTGAATTTATTGAAGTCATAGCATTCAGGTAACAGCATCATCTATACTCCCAATA ATGTTATCAAGAAAGTTAAAATAAATTTCAATATTTGTCACCATCTAATTGGGATTTGATCTAAGGATAATGGAAATGAT CAAGTTTTTGGAAGTGTTGCTCTTGTAATCAACTTAGTTACAGAGTCTAGTGTATTCATAGAAGAATGCTACATAATTTA GTTGTTCACTCAATTACTACAGGTCTACAGCAATTTTCTTTTGCTTTTCTTAACCATCAAGATCTGATGAATTTCATGGT CAATTCTAGGCACGCGCATAACGTGGCTTTTGAGAAATCAGATTTGTTCTTCATCTGCATGCTTAGACCCCTGTCATCTA AAATCATTATTGATGATCATGAAATTGAAGCTGCAAAGGTTAGATATTCTTGCTCAACATTGGAAACTTTTCTCTATATG AGCAGTGTTGTTTTAGTGCATGTTTGAATAAACAGTAGACTTTCACGGTAAAAGCAGAATTGATTTTGTGGGAGGAGAAT TGATTCTCGAAGACTTGAACGTGAATCAAAACACTCCATTTTCTGAACCGGGCAGTGTTTTGTTTCTGAAAATTGATTTC TGGGTTTCCAGTAACTCTTGTGTGATGTGATGCAGTGGATGCCCCTGGTTGAGTTTGTAAAGCAACCACTCATCCAAGAA GATTCCATGTTCAAGAAGATCGTAGACATCTTCGTTGCACGTCTCGGGATGCGTTATTGCGGCCTATCAACTCATCAGAC ATTGTCCAAGTTTGATGGAACAACATCTTCCTTGTACTACAATGTCATGGATAATGAAAATATCAACTGTGTTGGAAATT GAAGTGAAACCTCAAACAAGCACAGCACTTCGAAACAGATATATCCCCCATATAAAATGTAACATATAGTTGCAATTTAA TTTCCAGATGTATATAAATATTTTCAATAACAACGTTCCTAAGGAACATGTGTAGTGTGTTGACTGTGTTCCCTTACTTT TATAGCTGAAATAAAAAGTTAGCATGTATATTTCAAGGTTAACATGTTAGAGACGATGGACAAAGGTTCTATTCTGCACA CCATGAAAAATTGCTTAGACTCTATACATATTTACTCTCAC
CDS sequence (LotjaGi4g1v0199700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTTGAAAACCTTCTCATCCATTTCAGTGTCTACATTTGAAGTTGGAAGATCTTCCTCCACTTCTCTGTCCAGTTT CAGGCTCAAATTTGGAGTTCAATTTTCTCCCCACTTTAAGTGCCACAGAGGGTTGTTTCTCAGGACTTGTTGTGCCTCGG ATGAGACTTATTATTTGGCAGATAGAGCTGCTGCCATTAGTTCAGCTTCTGCAGAAGCAAGTTCTCACTATGTTAATGGA GTAAATGGCTCAAGTTCTTCAAGTTTCTATTACAGAAATCTTAGAGAGCTTCATGCCTTTGATGATGAGTATGGGGGAGT TATCATTGACCCACATAGGTTACCATCTGACCCCTATTCCTTTGCACAAGTGCTAGGTTTATCTCTTTATCAGTGGAAAA AGATGGGAAAGAAGGGAATTTGGCTTAAGCTGCCATTAGAAAAATCTGACCTGGTTCCAATTGCTGTGAAGGAAGGTTTT CAATATCACCATGCTGAGCCAGGATATGTGATGTTAACTTATTGGATTCCAGAAGGACCTTGCATGCTTCCATCGAATGC GTCACATCTAGTAGGAGTTGGAGGATTTGTCATCAATGACAACAATGAAGTGCTTGTAGTGCAAGAGAAACACTGTTCTC CATCAAATCTTGGCCTTTGGAAGATGCCAACTGGATTCATTCATGAGGCAGAGGAGATATATGCAGGAGTTGTAAGAGAA GTGAAGGAAGAAACAGGGATTGAAACTGAATTTATTGAAGTCATAGCATTCAGGCACGCGCATAACGTGGCTTTTGAGAA ATCAGATTTGTTCTTCATCTGCATGCTTAGACCCCTGTCATCTAAAATCATTATTGATGATCATGAAATTGAAGCTGCAA AGTGGATGCCCCTGGTTGAGTTTGTAAAGCAACCACTCATCCAAGAAGATTCCATGTTCAAGAAGATCGTAGACATCTTC GTTGCACGTCTCGGGATGCGTTATTGCGGCCTATCAACTCATCAGACATTGTCCAAGTTTGATGGAACAACATCTTCCTT GTACTACAATGTCATGGATAATGAAAATATCAACTGTGTTGGAAATTGA
Protein sequence (LotjaGi4g1v0199700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MELKTFSSISVSTFEVGRSSSTSLSSFRLKFGVQFSPHFKCHRGLFLRTCCASDETYYLADRAAAISSASAEASSHYVNG VNGSSSSSFYYRNLRELHAFDDEYGGVIIDPHRLPSDPYSFAQVLGLSLYQWKKMGKKGIWLKLPLEKSDLVPIAVKEGF QYHHAEPGYVMLTYWIPEGPCMLPSNASHLVGVGGFVINDNNEVLVVQEKHCSPSNLGLWKMPTGFIHEAEEIYAGVVRE VKEETGIETEFIEVIAFRHAHNVAFEKSDLFFICMLRPLSSKIIIDDHEIEAAKWMPLVEFVKQPLIQEDSMFKKIVDIF VARLGMRYCGLSTHQTLSKFDGTTSSLYYNVMDNENINCVGN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 7 | 359 | 353 | 3.8E-154 | – | |
| PANTHER | 7 | 359 | 353 | 3.8E-154 | – | |
| Gene3D | 94 | 181 | 88 | 5.4E-29 | – | |
| Pfam | 98 | 176 | 79 | 4.1E-30 | ||
| PRINTS | 148 | 166 | 19 | 1.2E-15 | ||
| SUPERFAMILY | 156 | 329 | 174 | 1.16E-31 | ||
| PRINTS | 170 | 186 | 17 | 1.2E-15 | ||
| PRINTS | 186 | 204 | 19 | 1.2E-15 | ||
| ProSiteProfiles | 188 | 323 | 136 | 15.008 | ||
| CDD | 189 | 320 | 132 | 1.42469E-65 | – | |
| Gene3D | 190 | 325 | 136 | 1.7E-32 | – | |
| Pfam | 191 | 306 | 116 | 1.4E-18 | ||
| ProSitePatterns | 225 | 246 | 22 | - | ||
| PRINTS | 246 | 269 | 24 | 1.2E-15 | ||
| PRINTS | 274 | 298 | 25 | 1.2E-15 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi4g1v0199700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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