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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0217200 |
| Transcript ID | LotjaGi4g1v0217200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Subtilisin-like protease; TAIR: AT1G04110.1 Subtilase family protein; Swiss-Prot: sp|O64495|SBT12_ARATH Subtilisin-like protease SBT1.2; TrEMBL-Plants: tr|A9QY38|A9QY38_LOTJA Subtilase; Found in the gene: LotjaGi4g1v0217200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:51060644..51063680) extracted from Lotus japonicus Gifu genome v1.2.
GTAATGATTTATTTCACTCTCACATAATGGAATATACTAATTAGAAGTAAACTTTTAAAATCTAGAGGGGACAAACCACC TACATAAATCCGTCCCTAGGCAAATGCAAAAGGTAGGGCAATCGAATAAGCTAAAAAGAGTCGTACATGATTCCATTGTA CGATCTTCCAACCAATAAGGTTAAACAGAACATGGTAGGAGAGACAAGAGAACAAAAACCTCCTAACAAATGCAAATCAC TGTTGCCGACTTAAGAATAAATAAAATCCTCACCAACATCTAACCAAGCTGACCCAGTTCATTATGTTCCATTAGGAACA TGTTATTTACATACATACATATGCCGGCATTGTTCTTCTCTCTGAAAAGTTCATACCAGATCTAGATTCCTTGCATATAT GTACTCCATTTGTGAACGTTTAAAGCAAGAGGGAATAAATGCCAATGCATGATTGATAAAGACAAAATCAATAATGCAGA GAAGCTTCAGTGACCGTGAGTCAGTTCAGGGTGTCTGAATTGATTTTGGGGAAACATAAGCTATAATCCAAACTAGCTAT AAATAGCCTTCTGTCTTTCATTCTTACATCAAGTAGAAAGTAGTGAAGATTCTTTTGAACATGGATTATTTCCTTTTCAT TGCTCTCACTTTCTTGTTGACCTTCCATGTTCACAATGCTCAAGGAAGTGAGCTTCCCACCACTACCACCGAGAGCACTG AGACAAGCAGTTCAAAAATATACATTATCCATGTGACGGGGCCAGAGGGTAAGATGTTAACTGAATCAGAAGATTTAGAG AGCTGGTACCATTCATTCTTGCCACCAACTCTTAAGAGCTCTGAGGAACAGCCACGAGTGATTTACTCATACAAGAACGT GCTGCGTGGATTTGCTGCAAGTCTCACTCAAGAGGAGCTTAGTGCTGTGGAAAAGAAAAATGGCTTTATTTCAGCTCATC CTCAGAGGGTGCTACATCGTCAAACCACTCATACCCCGAAGTTCTTGGGGTTGCAGCAAGATACGGGAGTGTGGAAGGAA TCCAATTTTGGAAAGGGAGTTATCATTGGGGTGCTGGACTCTGGAATCACCCCAGGTCATCCTTCATTCAGTGATGTAGG AATCCCACCACCACCACCGAAATGGAAAGGGAGATGTGATCTTAATGTGACAGCTTGTAACAACAAACTAATTGGAGCAA GGGCTTTCAATCTTGCAGCTGAGGCAATGAATGGAAAGAAAGCGGAGGCACCTATTGACGAGGATGGGCATGGGACTCAC ACAGCAAGCACAGCAGCCGGCGCTTTCGTGAACTACGCAGAAGTGCTAGGAAATGCCAAAGGCACAGCAGCAGGGATGGC CCCTCATGCTCACCTGGCAATTTACAAAGTATGCTTTGGAGAAGATTGCCCTGAGAGTGATATCCTAGCTGCATTAGATG CAGCAGTTGAAGATGGCGTGGATGTAATATCAATATCCCTCGGTCTAAGCGAGCCACCTCCATTTTTCAATGATAGCACT GCTATAGGAGCATTTGCTGCAATGCAGAAGGGAATCTTTGTGAGTTGTGCAGCAGGAAACTCTGGCCCTTTCAATAGCTC CATAGTTAATGCAGCCCCGTGGATTCTCACAGTTGGAGCAAGCACTATTGACAGAAGAATTGTAGCAACAGCAAAGCTTG GCAATGGGCAAGAATTTGATGGTGAATCTGTTTTCCAGCCTTCCAGTTTTACTCCAACATTGCTACCCCTAGCATATGCT GGAAAAAATGGTAAAGAAGAATCTGCATTCTGTGCTAATGGATCCTTGGATGACAGTGCTTTCAGAGGCAAGGTTGTTTT GTGTGAGAGAGGAGGGGGTATAGCAAGAATAGCCAAAGGAGAGGAGGTGAAAAGAGCAGGTGGTGCCGCCATGATTCTGA TGAATGATGAAACTAATGCCTTTAGTCTCTCAGCTGATGTACATGCTCTACCTGCAACACATGTAAGCTATGCTGCTGGA ATAGAGATTAAGGCATATATAAATTCCACAGCAACACCAACAGCAACCATTTTATTTAAGGGAACTGTTATCGGAAACTC CCTAGCCCCTGCTGTTGCATCTTTCTCTTCAAGAGGTCCCAACTTGCCAAGTCCCGGTATTTTGAAACCAGATATCATAG GACCAGGCGTGAACATCCTAGCTGCCTGGCCGTTCCCTCTGAGTAACAGCACCGATTCAAAACTCACTTTCAACATTGAG TCTGGAACATCTATGTCATGCCCACATCTTAGTGGCATTGCTGCTTTGCTCAAAAGCTCTCATCCTCATTGGTCACCAGC TGCCATAAAATCTGCCATAATGACTTCTGCAGACACAATAAATTTAGGAAACAAACTCATTGTTGATGAAACACTTCAGC CTACAGATCTCTTTGCCACAGGTTCTGGCCACGTGAATCCATCAAGAGCAAACGATCCTGGATTAGTTTATGATATCCAA CCTGATGATTATATACCTTATCTGTGTGGTCTAGGCTATAGTGAGACTGAAGTTGGGATCATTGCACATAGAAAAATTAA GTGCTCTGCAAGCATTCCCGAAGGAGAGCTCAACTACCCCTCATTTTCTGTTGAGCTTGGTTCCTCAAAGACATTCACAA GGACTGTGACAAATGTCGGTGAGGCCCATTCATCTTATGATCTCATAGTTGCGGCACCACAAGGAGTTGATGTGAAGGTC CAGCCATATAAGCTTAACTTTTCTGAAGTGAACCAGAAAGAGACATATTCAGTTACATTCAGCCGCACAGGGTTGGGTAA TAAGACACAGGAATATGCTCAAGGTTTTCTAAAATGGGTCTCTACCAAACACACTGTAAGGAGTCCTATCTCAGTCAAAT TCATATAGGATAATATGTAAACAAGCAGCAATATGTATTGCCAGAAAATTGTCCTACTAGCTACAACATCAATAAGAAGC AAAAATATCATGAGTGTTAAATACATGTGGTAACTGTGCTCAACTTCTTTCGACTTAAAACTTTCGAAATAGCCAAA
CDS sequence (LotjaGi4g1v0217200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTATTTCCTTTTCATTGCTCTCACTTTCTTGTTGACCTTCCATGTTCACAATGCTCAAGGAAGTGAGCTTCCCAC CACTACCACCGAGAGCACTGAGACAAGCAGTTCAAAAATATACATTATCCATGTGACGGGGCCAGAGGGTAAGATGTTAA CTGAATCAGAAGATTTAGAGAGCTGGTACCATTCATTCTTGCCACCAACTCTTAAGAGCTCTGAGGAACAGCCACGAGTG ATTTACTCATACAAGAACGTGCTGCGTGGATTTGCTGCAAGTCTCACTCAAGAGGAGCTTAGTGCTGTGGAAAAGAAAAA TGGCTTTATTTCAGCTCATCCTCAGAGGGTGCTACATCGTCAAACCACTCATACCCCGAAGTTCTTGGGGTTGCAGCAAG ATACGGGAGTGTGGAAGGAATCCAATTTTGGAAAGGGAGTTATCATTGGGGTGCTGGACTCTGGAATCACCCCAGGTCAT CCTTCATTCAGTGATGTAGGAATCCCACCACCACCACCGAAATGGAAAGGGAGATGTGATCTTAATGTGACAGCTTGTAA CAACAAACTAATTGGAGCAAGGGCTTTCAATCTTGCAGCTGAGGCAATGAATGGAAAGAAAGCGGAGGCACCTATTGACG AGGATGGGCATGGGACTCACACAGCAAGCACAGCAGCCGGCGCTTTCGTGAACTACGCAGAAGTGCTAGGAAATGCCAAA GGCACAGCAGCAGGGATGGCCCCTCATGCTCACCTGGCAATTTACAAAGTATGCTTTGGAGAAGATTGCCCTGAGAGTGA TATCCTAGCTGCATTAGATGCAGCAGTTGAAGATGGCGTGGATGTAATATCAATATCCCTCGGTCTAAGCGAGCCACCTC CATTTTTCAATGATAGCACTGCTATAGGAGCATTTGCTGCAATGCAGAAGGGAATCTTTGTGAGTTGTGCAGCAGGAAAC TCTGGCCCTTTCAATAGCTCCATAGTTAATGCAGCCCCGTGGATTCTCACAGTTGGAGCAAGCACTATTGACAGAAGAAT TGTAGCAACAGCAAAGCTTGGCAATGGGCAAGAATTTGATGGTGAATCTGTTTTCCAGCCTTCCAGTTTTACTCCAACAT TGCTACCCCTAGCATATGCTGGAAAAAATGGTAAAGAAGAATCTGCATTCTGTGCTAATGGATCCTTGGATGACAGTGCT TTCAGAGGCAAGGTTGTTTTGTGTGAGAGAGGAGGGGGTATAGCAAGAATAGCCAAAGGAGAGGAGGTGAAAAGAGCAGG TGGTGCCGCCATGATTCTGATGAATGATGAAACTAATGCCTTTAGTCTCTCAGCTGATGTACATGCTCTACCTGCAACAC ATGTAAGCTATGCTGCTGGAATAGAGATTAAGGCATATATAAATTCCACAGCAACACCAACAGCAACCATTTTATTTAAG GGAACTGTTATCGGAAACTCCCTAGCCCCTGCTGTTGCATCTTTCTCTTCAAGAGGTCCCAACTTGCCAAGTCCCGGTAT TTTGAAACCAGATATCATAGGACCAGGCGTGAACATCCTAGCTGCCTGGCCGTTCCCTCTGAGTAACAGCACCGATTCAA AACTCACTTTCAACATTGAGTCTGGAACATCTATGTCATGCCCACATCTTAGTGGCATTGCTGCTTTGCTCAAAAGCTCT CATCCTCATTGGTCACCAGCTGCCATAAAATCTGCCATAATGACTTCTGCAGACACAATAAATTTAGGAAACAAACTCAT TGTTGATGAAACACTTCAGCCTACAGATCTCTTTGCCACAGGTTCTGGCCACGTGAATCCATCAAGAGCAAACGATCCTG GATTAGTTTATGATATCCAACCTGATGATTATATACCTTATCTGTGTGGTCTAGGCTATAGTGAGACTGAAGTTGGGATC ATTGCACATAGAAAAATTAAGTGCTCTGCAAGCATTCCCGAAGGAGAGCTCAACTACCCCTCATTTTCTGTTGAGCTTGG TTCCTCAAAGACATTCACAAGGACTGTGACAAATGTCGGTGAGGCCCATTCATCTTATGATCTCATAGTTGCGGCACCAC AAGGAGTTGATGTGAAGGTCCAGCCATATAAGCTTAACTTTTCTGAAGTGAACCAGAAAGAGACATATTCAGTTACATTC AGCCGCACAGGGTTGGGTAATAAGACACAGGAATATGCTCAAGGTTTTCTAAAATGGGTCTCTACCAAACACACTGTAAG GAGTCCTATCTCAGTCAAATTCATATAG
Protein sequence (LotjaGi4g1v0217200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDYFLFIALTFLLTFHVHNAQGSELPTTTTESTETSSSKIYIIHVTGPEGKMLTESEDLESWYHSFLPPTLKSSEEQPRV IYSYKNVLRGFAASLTQEELSAVEKKNGFISAHPQRVLHRQTTHTPKFLGLQQDTGVWKESNFGKGVIIGVLDSGITPGH PSFSDVGIPPPPPKWKGRCDLNVTACNNKLIGARAFNLAAEAMNGKKAEAPIDEDGHGTHTASTAAGAFVNYAEVLGNAK GTAAGMAPHAHLAIYKVCFGEDCPESDILAALDAAVEDGVDVISISLGLSEPPPFFNDSTAIGAFAAMQKGIFVSCAAGN SGPFNSSIVNAAPWILTVGASTIDRRIVATAKLGNGQEFDGESVFQPSSFTPTLLPLAYAGKNGKEESAFCANGSLDDSA FRGKVVLCERGGGIARIAKGEEVKRAGGAAMILMNDETNAFSLSADVHALPATHVSYAAGIEIKAYINSTATPTATILFK GTVIGNSLAPAVASFSSRGPNLPSPGILKPDIIGPGVNILAAWPFPLSNSTDSKLTFNIESGTSMSCPHLSGIAALLKSS HPHWSPAAIKSAIMTSADTINLGNKLIVDETLQPTDLFATGSGHVNPSRANDPGLVYDIQPDDYIPYLCGLGYSETEVGI IAHRKIKCSASIPEGELNYPSFSVELGSSKTFTRTVTNVGEAHSSYDLIVAAPQGVDVKVQPYKLNFSEVNQKETYSVTF SRTGLGNKTQEYAQGFLKWVSTKHTVRSPISVKFI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_NEGATIVE | 1 | 20 | 20 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 22 | 22 | - | – | |
| SignalP_EUK | 1 | 20 | 20 | - | – | |
| Phobius | 1 | 22 | 22 | - | – | |
| Phobius | 4 | 15 | 12 | - | – | |
| Phobius | 16 | 22 | 7 | - | – | |
| Gene3D | 23 | 119 | 97 | 7.7E-12 | ||
| Phobius | 23 | 755 | 733 | - | – | |
| PANTHER | 34 | 753 | 720 | 0.0 | – | |
| PANTHER | 34 | 753 | 720 | 0.0 | – | |
| Pfam | 41 | 119 | 79 | 5.1E-10 | ||
| CDD | 118 | 578 | 461 | 1.13647E-131 | ||
| SUPERFAMILY | 121 | 615 | 495 | 1.7E-81 | ||
| ProSiteProfiles | 128 | 611 | 484 | 31.846 | – | |
| Pfam | 144 | 584 | 441 | 3.8E-50 | ||
| PRINTS | 144 | 163 | 20 | 4.6E-19 | ||
| Gene3D | 146 | 625 | 480 | 1.7E-181 | ||
| ProSitePatterns | 149 | 160 | 12 | - | ||
| PRINTS | 213 | 226 | 14 | 4.6E-19 | ||
| Gene3D | 344 | 485 | 142 | 1.7E-181 | – | |
| CDD | 350 | 477 | 128 | 5.95479E-41 | – | |
| Pfam | 376 | 461 | 86 | 4.6E-10 | ||
| PRINTS | 541 | 557 | 17 | 4.6E-19 | ||
| Gene3D | 628 | 755 | 128 | 1.2E-37 | – | |
| Pfam | 656 | 752 | 97 | 2.4E-28 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Serine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of LotjaGi4g1v0217200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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