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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0222600 |
| Transcript ID | LotjaGi4g1v0222600.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Uridine kinase; TAIR: AT5G40870.1 uridine kinase/uracil phosphoribosyltransferase 1; Swiss-Prot: sp|Q9FKS0|UKL1_ARATH Uridine kinase-like protein 1, chloroplastic; TrEMBL-Plants: tr|I1MUP0|I1MUP0_SOYBN Uridine kinase; Found in the gene: LotjaGi4g1v0222600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:52763851..52768972) extracted from Lotus japonicus Gifu genome v1.2.
GTCATCGGTACGTATAATCTCAATCCGTTTGTTTCTCGGGAAAATATTTGCTCCTCTTTCTCGGAAACCAAACACCATCG AAACCGTCTGAATCTGATTGAATGAGCATCTCTGGCGCATACATGCATAATCACTCGCTTTGGCTCACTGTTTTTTTTTT GCTCGATCTCTGAATTCTCTCGAGGATCGATTTGTCCGTATGGAAAGAAAATTTAAGCATTAACTTTCTCGCATTTTGAG AAAATTCATGGTTTGTGTTGTTTCTGAGCTTCTACTTCGATTCGATTTGCGTGAATCAGGTGTCTCTGGAGGTACGGCAT CGGGGAAAACCACAGTTTGTGATATGATCATTCAACAACTGCAAGATCACAGAGTTGTGCTCGTCAGCCAGGTCAGTCAG ATTGAATTTGTAGTTGCAATCTTCTGTTGGTTGATAATTGATAAGGGAATCATGAACGAAATCATTGAGTTTGTTCCTTG TATTGTGGATTTCTGATTTGTGACTTGATCTGAAAGTGAGTAGAAATGAATTCAAGCTAATTACTAGTAACTTGAGGGTA ATTATCTGTTATTATTGTTACAGGATTCGTTCTATCGTGGTTTAACAAATGAAGAGTTGAAACGAGGTCATGAGTATAAT TTTGATCATCCTGGTAAGCTAGCACGGATCTTAATTAAGATTGTTAGGCACTGCCATTGGCACTCACCTGATCTTAAGTA AATTTTCTGGTTTTGGTAGATGCATTTGATACGGAGCAGCTTGTAGAAACACTCAGCCAGCTCAAATCTGGACAGTCAGT TCAGGTTCCAATATATGATTTTAAGCTCCACCAGAGATCTTCTGACACTTTCCGACAGGTACCCTTCATTCCGATGTGTT AAACTAAAATGGGGAGTTAATATCAGTTGTTCTCCCACTTGTGGCCAAGATTGAATCTCTTAATTTATGCAACTACGAGA TAACACGCGGTTACAGAGCTCCTAAAGAGCCAACTTGCCCATGTATATAGATAATTATGTTTGTGTTTGTTCAGAAGAAG AGAGTATAGCTTTCTAATTCATCTCGTTGATCTTTTGAATATTTTTTTCTTAAAACCCGATGCTCATTCTTCACTGAATA TTGAAACTGAGATGGTAGTTGTTTTCAGATAATTATGATTTAAGGTACAATACTCGTGTAAAATGAAAAAATATGCAGTA GTGCATGTTGTTAATGTTTATTTACCATTTGGCAGGTCAATGCATCTGAAGTAATCATCCTAGAGGGTATATTGGTTTTT CATGAACAACGTGTCCGCAACATGATGGATATGAAGATATTTGTTGATGCAGGTCAATTGCTCTTCCATTGTTTTTTATC ATTTCAGGCTGTTTTCTCATCTATTACAGGTTAATTGGATTAAAATGGCCTGAATTTTGTTTATCATGGGGTAAAAGAGA TGGTTTTAGAGTCAATAAATGGAATGGTAGGTACTACACTTGTCTAGTTCTACCATATATAGTTATGCCTTGATCTGTCT TCTATCCATCAGATGAGATCCATGAAGTACAACTATCCCCCTCCCCCACACACACACACACAAACACAGGCAACGTTGCA CTGTTGCCTTTCACAGAAAATTGATCAATCTTTTTTTTTTTGGAAAAATCTACTGTCCCAGCTGAAATCTGATGCTGAGA GGATGATGCAGAATAACTAGAATTCTCCTCCCAGGTTGTGTTTACTTTTTTACATGATATAGGAATAAATAAAATAAACT AACTCATGACCACTTGGTTTATACAAATTTCTACAAATGATGTAACCTGGCCATAAACCTTGGACTATAGATATAGAGGT CCAGGACTTCACATCTAGCTCTTTAACATTATGTTCGCTGATAAGAAATTATTCTAGACATGCTTTTTGATAATTGAAAG AAACACAAATTGCTGTCTTCCATATAAATATGATGAATGGCAATGGGAAATCATTTCTTGACCATCTGAAGTTCTTCATC CTCTCAAGAAGATTCTCTTTATCAGTAAATATTCAGACGATACATTGCGACAATCTTCAATAATAATGATTTCTCTGAAG AAATTGTCGACGAGTTTTATATTTTTCTTATACTTGTTGTCATTCCGATATTGCATTGTATGCTATGCAGATCCTGATGT AAGGCTTGCTCGCAGAATACGACGTGATACTGTTGATAGGGGTAGAGATGTACTCTCAGTACTGGAACAGGTAAGACATA ATCTTTATCCTTTATTATAACATCATCAGATTGACCGATGTCAGGAATTCATGATCATGAATAAGGATTGCTATCTAATA ATTTATTTATATTGATATCTTAAAATTGATATAAGATGATAAACTTAACAATTTTTTTATTTCAAAGGACGATAAATCAA TAATGCTCCTAATGCTCATTCTAAAAAATAATTGTGTTGCGACAAGCCTCTGCTCAATACAAGGATTCAGTCCCATTAAT TGTAAAGGACATATGCTTTGAGCCAAGTTCAGGTTGCCATGTAATAAGCAAACAATGTATATGTTTGGGCAATTTTTTTT TTGAAAAGGGCATACAGATAATATATTGCTGTCTTTGTATTGGGGTCCTATATCTCTGCACTGGGATGATAGATCGCCAG TAAGCAACATGTTAGTGTATTACCTTTTCTGGAGGATAGTAAATAACTAAATATGTACTTAGCATATTGAATCTAATTGG TGCTATGAAATTAAGTGGCTGATATGGAAAAATCTTGATTAAATTTTCTTCAGTATGCAAAATTTGTCAAGCCTGCCTTC GATGACTTTATTCTTCCATCCAAAAAGTATGCTGATGTCATCATACCTCGTGGGGGAGACAATCATGTAGCAATTGACCT GATTGTTCAACATATCCGTACTAAGCTTGGCCAACATAACCTCTGTAAGATATATCCAAATTTGAATGTGATACAGTCTA CTTTCCAGGTAATTTTCATCTTGCGTCATCTTCTCCTAAATTTTTATTTGCTTCTTTCCTCCAAGGAGATATTCCCAACG CGACTTTCTAATGTTGAAGCTTTCTTACAGGCTAGAGGCATGCACACTCTAATTCGTGACAAGGAAATATCAAAACATGA CTTTGTTTTTTATTCAAATCGGCTAATTCGTTTGGTAGGTACTTTGAGCTTTATGCAGGATTTATAGCCCCTATTGACAC TAATCTCAGTATCACTGACTTCACAGGTAGTGGAACATGGTCTTGGTTACTTGCCATTCACAGAGAAACAAGTTATCACA CCTACAGGTCTGTCTAAGGAAGAGAAAATACCATTTCATCATTTAAATCTGTCAGCTAGTGTTTCATTTATTTATGTTTC TGCATAACTTGAAAGACTTAACATGTTTGAGCAGCGCTTCAAAATTTTGCTATCTTCATTATCTCTCAACTTTTTCAGTT TTCGCATTGTTTACACTGAAACCCCACACACGAAACACACATGCACACGATGACACAAAAGAAAGACACCGCTAAATTAC ACTTGTTTTTCCATTTCAGGGTCAATTTATATTGGAGTTGATTTTTGTAAGAAATTGTGCGGAGTATCTGTTATTCGAAG GTACTTTCCTAGTTCAAAAGGTTTACTGTCATTGTGATTCTTCATAGACTTATGGTCTCCTACTCCATTGGCATATTTAT CTTTATGATTTTGGATGTATTAAATGTTCATAATCTTATGGTAAAGTAAGGAAAAAACGTGTTAGCATTTGTTATTTCAA TTTTTAAGGTACCGTTATCCAAAAGATTTTACTTTTAATGGGAACATAGTTTCATCTCATAACAAATTTATTCTGTCTAA AACCAATTTCATATGAGATACGATATACAATAATTAACCCCTAATCTGAGGTGGAATGCGTGCTCAAGTGACTTCTTGGG ATTTTGATGCTAGAATGTTTATGAATTCTAATCAGTGCAGTTGTATTACATAGAGAAAAATTAATTTATAACCCAGTATA AGTTGGTTTCCGTGATAACGTTTCAGTGGCGAAAGCATGGAAAATGCTTTGCGTGAATGCTGTAAAGGAATCAAAATAGG AAAAATTCTCATCCACCGTGAAGGTGATGAAACCCAGGTAATGGTTTTCCTTTTTGACTGTGTTCATTCTGTCTTGAATT TGTTAGTTTTCTGCGTAGGATGATACAACTCTGCAGCAAATGTAACACGATGTTTTTATTCCATTAAGCTTATTTATGAG AAGCTTCCGAAAGATATTGCAGAGAGACATGTTCTTCTCATGGATCCAGTACTTGGTACAGGTGAGTTCATTATCTTTTT GCATGCATCATTTTGTCAGTAACATTGATCTTCTTAATGCTCACAAGTGACAACTTTTTTATTTATATTCCCATTCCGCG ATTGGATTTGTGAGTAATTGTTGAATACTGTCAGTACAACTGTCCAACCAATTAATTCAGGGTACTAGGCGCACAATACT GCATTACAATTGCAGCTAAGATTGGAAAAGTTTGAGATCTTCCTGATGACAGATCAGATCACAAAACAAATGGGTTTTGA AATATTTACACTTACACTTACTATTCTATTCTATTTCCATCCACTTTCTGTTCTCATCTCTCTTTTTTTCCTATCACATC AATCATCTTGTCTCTCATTTCTCTCTGATCTATTCCTATCTTTCCATGCGTGTGGGTGGAGCGTGTGGGTGGATTTGGAG TGTGAATAAATTTGTATTTGTTTCATTTATGCACGACACCGCTACTTCTTTCAGCTGGCAATGAGCATCTAATTGATTTT TCCAGGTAACACTGCCAGTCAAGCAATCGAGCTTCTTATAAAGAAGGGATGTCCAGAGTCCCGTATAATATTCCTCAACC TCATCTCTGTAAGTTATAATATTCAATTGAATACGAGTAAAGACCCTATGTTTGATGAATACCAACATAAGAAATTTCAA AACTGATTTCAGGCTCCTGAGGGAATACATTGTGTATGTAAACGTTTTCCGCAGTTGAAAATTGTCACTTCAGAGATTGA AGTAGGACTGAATGACCAGTTTCGTGTCATGCCTGGGCTAGGAGAATTCGGTGACCGTTATTTTGGGACGGATGACTCCT AG
CDS sequence (LotjaGi4g1v0222600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATCATTCAACAACTGCAAGATCACAGAGTTGTGCTCGTCAGCCAGGATTCGTTCTATCGTGGTTTAACAAATGAAGA GTTGAAACGAGGTCATGAGTATAATTTTGATCATCCTGATGCATTTGATACGGAGCAGCTTGTAGAAACACTCAGCCAGC TCAAATCTGGACAGTCAGTTCAGGTTCCAATATATGATTTTAAGCTCCACCAGAGATCTTCTGACACTTTCCGACAGGTC AATGCATCTGAAGTAATCATCCTAGAGGGTATATTGGTTTTTCATGAACAACGTGTCCGCAACATGATGGATATGAAGAT ATTTGTTGATGCAGATCCTGATGTAAGGCTTGCTCGCAGAATACGACGTGATACTGTTGATAGGGGTAGAGATGTACTCT CAGTACTGGAACAGTATGCAAAATTTGTCAAGCCTGCCTTCGATGACTTTATTCTTCCATCCAAAAAGTATGCTGATGTC ATCATACCTCGTGGGGGAGACAATCATGTAGCAATTGACCTGATTGTTCAACATATCCGTACTAAGCTTGGCCAACATAA CCTCTGTAAGATATATCCAAATTTGAATGTGATACAGTCTACTTTCCAGGCTAGAGGCATGCACACTCTAATTCGTGACA AGGAAATATCAAAACATGACTTTGTTTTTTATTCAAATCGGCTAATTCGTTTGGTAGTGGAACATGGTCTTGGTTACTTG CCATTCACAGAGAAACAAGTTATCACACCTACAGGGTCAATTTATATTGGAGTTGATTTTTGTAAGAAATTGTGCGGAGT ATCTGTTATTCGAAGTGGCGAAAGCATGGAAAATGCTTTGCGTGAATGCTGTAAAGGAATCAAAATAGGAAAAATTCTCA TCCACCGTGAAGGTGATGAAACCCAGCTTATTTATGAGAAGCTTCCGAAAGATATTGCAGAGAGACATGTTCTTCTCATG GATCCAGTACTTGGTACAGGTAACACTGCCAGTCAAGCAATCGAGCTTCTTATAAAGAAGGGATGTCCAGAGTCCCGTAT AATATTCCTCAACCTCATCTCTGCTCCTGAGGGAATACATTGTGTATGTAAACGTTTTCCGCAGTTGAAAATTGTCACTT CAGAGATTGAAGTAGGACTGAATGACCAGTTTCGTGTCATGCCTGGGCTAGGAGAATTCGGTGACCGTTATTTTGGGACG GATGACTCCTAG
Protein sequence (LotjaGi4g1v0222600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIIQQLQDHRVVLVSQDSFYRGLTNEELKRGHEYNFDHPDAFDTEQLVETLSQLKSGQSVQVPIYDFKLHQRSSDTFRQV NASEVIILEGILVFHEQRVRNMMDMKIFVDADPDVRLARRIRRDTVDRGRDVLSVLEQYAKFVKPAFDDFILPSKKYADV IIPRGGDNHVAIDLIVQHIRTKLGQHNLCKIYPNLNVIQSTFQARGMHTLIRDKEISKHDFVFYSNRLIRLVVEHGLGYL PFTEKQVITPTGSIYIGVDFCKKLCGVSVIRSGESMENALRECCKGIKIGKILIHREGDETQLIYEKLPKDIAERHVLLM DPVLGTGNTASQAIELLIKKGCPESRIIFLNLISAPEGIHCVCKRFPQLKIVTSEIEVGLNDQFRVMPGLGEFGDRYFGT DDS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 401 | 401 | 1.2E-260 | – | |
| PANTHER | 1 | 401 | 401 | 1.2E-260 | – | |
| CDD | 1 | 182 | 182 | 1.49903E-99 | ||
| Gene3D | 1 | 185 | 185 | 9.5E-58 | – | |
| SUPERFAMILY | 6 | 175 | 170 | 9.52E-40 | ||
| Pfam | 11 | 170 | 160 | 6.2E-42 | ||
| PRINTS | 12 | 23 | 12 | 1.3E-22 | – | |
| PRINTS | 57 | 72 | 16 | 1.3E-22 | – | |
| ProSiteProfiles | 70 | 171 | 102 | 8.932 | ||
| PRINTS | 114 | 124 | 11 | 1.3E-22 | – | |
| PRINTS | 128 | 139 | 12 | 1.3E-22 | – | |
| PRINTS | 150 | 163 | 14 | 1.3E-22 | – | |
| SUPERFAMILY | 185 | 401 | 217 | 3.15E-59 | ||
| Gene3D | 186 | 400 | 215 | 4.5E-82 | ||
| Pfam | 200 | 400 | 201 | 4.1E-71 | – | |
| CDD | 255 | 373 | 119 | 7.83706E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Nucleoside metabolic process | The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine). | ||
| Molecular function | Kinase activity | Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. |
Expression pattern of LotjaGi4g1v0222600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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