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LotjaGi4g1v0245100.6

Overview

Field Value
Gene ID LotjaGi4g1v0245100
Transcript ID LotjaGi4g1v0245100.6
Related isoforms 6
Lotus japonicus genome version Gifu v1.2
Description Plasma membrane ATPase; TAIR: AT5G62670.1 H -ATPase 11; Swiss-Prot: sp|Q9LV11|PMA11_ARATH ATPase 11, plasma membrane-type; TrEMBL-Plants: tr|A0A0L9TRX0|A0A0L9TRX0_PHAAN Plasma membrane ATPase; Found in the gene: LotjaGi4g1v0245100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:59698071..59703643) extracted from Lotus japonicus Gifu genome v1.2.

ATGTGGAATCCTCTGTCTTGGGTTATGGAGGCAGCTGCTATAATGGCTATTGCCCTTGCCAATGGAGGGGTGAGTTTTCT CAGCTTTTTGGAATTCTTATTGGCAATGGAGTTTGGTGTATTTTTAGGTTGATTATTATATGAACTTGTTTTTGAAATAT CTATGCAGGGGAAGGCTCCTGATTGGCAAGATTTTGTGGGTATCATCACCTTGCTTGTCATTAATTCAACTATCAGTTTC ATAGAGGAGAACAATGCTGGTAATGCAGCTGCAGCTCTCATGGCACGTCTCGCTCCAAAAGCAAAGGTGTCAAAATCAGT TTATCTTGTCTCATCTCAATAATTTAGCTTTGTGCATTTCATATTAAATTATTGATTGTTGCAGTTAAATCATTGCATCT GTGGAAGTTTTTTTTTGAAAAAAACTTATAGTTTTATTTCTCATGTGTGTTTGTAAAGGTTCTTCGAGATGGTAGATGGA ATGAGCAAGATGCCGCCATCCTGGTTCCAGGTGACATAATCAGCATCAAACTTGGGGATATTGTACCTGCAGATGCTCGT CTTCTTGAAGGAGATCCTTTAAAAATTGACCAGGTGAGTTTTTTTTTTAAATGATATCCATGATCTGTCATATAATTTCT GCTGTTTTAATCCATCAAATGTGTAATAATAGTTTATTTACCCTCCTTTTTGCTTTGTACTTTTCAGTCTTCACTCACAG GTGAGTCTCTGCCAGTGACAAAGGGCCCTGGTGATGGTGTATATTCTGGTTCTACCTGCAAACAAGGAGAGATTGAAGGT GTGGTCATTGCTACTGGTGTTCACACCTTCTTTGGGAAAGCTGCTCACCTTGTAGATACTACAAATCAAGTTGGTCACTT TCAAAAGGTAACATCAGGGAATGCAATTTTCTTTTTCTTCTAACAGTCTATTCAGTGGTCTTCGTTCAGATTTCAATTTT TCTATTTCCTGCTGTCAAATTTAGGTCTTGACTGCCATTGGGAACTTCTGCATATGCTCAATTGCTGTGGGGATGGTTAT TGAGATTGTTGTTATGTATCCCATCCAACATCGGCGTTATCGTCCTGGTATTGATAACCTCCTTGTACTTCTCATTGGAG GAATTCCAATTGCCATGCCCACAGTTTTGTCAGTGACCATGGCCATTGGTTCTCACAGGTTATCTCAGCAGGTCAGTTAG GTTTTTCAATTGAGCATTTTGGTTGGACATATGCAGGTAGCAACTAATGGTTATATTTCTGCAGGGGGCTATCACAAAAA GGATGACAGCCATTGAAGAAATGGCAGGCATGGATGTGCTTTGCAGTGATAAGACTGGGACTCTAACACTAAATAAGCTT ACTGTTGACAAAAATCTTGTTGAGGTTGGATGGTGAATGGAATTGTTTGCCGGTTATCTTTGTCTTTTCCCATGTACTTA TTCTAATTATTTATTTTAACCAATAAGGTTTTTGCAAAAGGAGTGGATCCTGATACTGTTGTCTTGATGGCGGCTCGAGC TTCTAGACTTGAGAATCAAGATGCAATAGATACAGCAATAGTTGGGATGCTGGCTGATCCAAAGGAGGTTTGTCATTGAT CTATTATTCACTGTCATTATTCTTTGAGCATATTTATTAGCTGCAAGCCTGCAACTATGATCTATTAGTCTGCACCTTCA CAGAAGTTTTTCTGAAGTCAAGTTGATGTAGCTTTTTTCTTTGTTTAACTTGCTGCTACTGAAGGCACGTGCTGGAATAC AAGAACTACATTTTCTTCCTTTCAATCCTACTGATAAGCGGACAGCATTGACTTATACTGATCAAGATGGTAAAATGCAT AGAGTAAGCAAAGGTGCACCAGAGCAGGTACTATATTAACTTGTCTACATGTTATTTTTGTTGTTAACTTAATATTTGGT CTCACATATTGACTTCATGATGTGTACCATGATTGTTAGATCCTAAATCTTGCACACAACAAGGCAGACATTGAACGTCG AGTTCATGCCGTGATAGATAAGTTTGCAGAGCGTGGTTTACGATCTCTTGCTGTATCGTACCAAGTAATTGATTTATTCT TAATCAATTGATGCATTTGTAGATTGTATTTTAAACTACAAATGGTTATGTAGGTTTCTCCATTTTATACAGGAAGTTCC AGATGGAAGGAAAGAAAGTGCAGGAGGCCCATGGCAATTCATTGGCCTTTTGCCTCTCTTTGACCCACCTAGGCATGATA GTGCAGAAACAATAAGGAGGGCACTAAACCTTGGAGTAAATGTCAAAATGATTACAGGTATATTACATACAGTGAGGATT GAGAATAATGTCTTGCTTATATTATGGTGATAAAATCACTGCTCTTTATAGTTACTTTCTCCTGTGAGGATTGGGAGTGA TCTTTTATGGAAGCTACTGATGAAATCTGAATCCTGCGAGTCAGTTATCCTGTGACATCCAAGTTATTTTTCATGTAATT CTGTTATTCTGCAAATGCTTCTGCCCGAGTGAACTTGTCTTACTCATTATACCAGCATCTCTTTTGGTTCTTCAGTCATC CAGAGGTGTATATTCCCATCCTGGTCCAGTATCATAAGTCATATCATTTCGACTTTTTCGTTGATGAACTTAAAGTTACA AATACGTGCTGGTAGATTAAGGATATTGCTTCAGATGGGTTGAATTAAGTGCAACTACTTCTCAACCTGAGTCTCATTGT TATAATGTACTGAAGGGGTTTATGAGATCCATGTTATAATTGAAAATTAACTTTTCTTGTGCATTTAGATTGAAGGGTGT GTTTTCAACATAACCCTAATTTTCAAATGTCCTCCTTCTAATTTTCATTTATACAACTTTTTCTCGTCAGGGGATCAGCT AGCTATAGGAAAGGAAACAGGCCGTCGATTGGGAATGGGCACCAATATGTATCCTTCATCTGCTTTACTTGGGCAGAATA AGGATGAATCCATTGCTGCCTTACCCGTTGATGAATTAATAGAAAAAGCGGATGGGTTTGCTGGCGTATTTCCTGGTACA CTTCTATGTTTTCATTGCAAATTATTGTTTCTCTCATTGTTTGACATGTATGAGATGGAAGATGAATGTGTAGTGATTCA GATTATATGATTCTTTGCTTATGTTAGTTGGTTAATATATTTTTCCAGAGCACAAGTATGAGATTGTGAAACGCTTGCAA GCTAGGAAACATATTTGTGGGATGACTGGTGATGGAGTGAATGATGCTCCTGCCCTCAAGAAGGCAGACATTGGTATAGC TGTTGCTGACGCTACTGATGCAGCTCGTAGTGCATCTGATATTGTTTTAACAGAACCTGGCCTTAGTGTTATTATAAGTG CTGTTTTGACCAGCCGTGCTATCTTCCAGAGAATGAAAAATTATACGGTAAGCAATTGAATTAATATCTTCTCAACATTT TTTTTCTCCAAATCATCTATTTCATCATTACTTCTGTAATTATGGTACTCCATTATGCTTACACTAATTTTGGGGAATAT TTATTTATCCAGGCCATCTGCATGTGAGTTACTTTAGTACAAGTGCTTATTATACTGTCTTGTCACTAACATCTTTCTTT TTTCATGCAGATTTATGCAGTCTCAATTACAATTCGTATTGTGGTAAGTGAATCATTTTTCAACTCTAGATCTGTTTTCT ATCTGACACGGCATTATTGATAATGTAATTACGAGATGGATCTAATTTTTTTGACCGTGCTCGACATGTTTGGCATGCTT ACAGCTTGGTTTCATGTTGCTGGCTCTCATATGGAAGTTTGACTTTCCACCTTTTATGGTGCTGATTATTGCCATCCTAA ATGATGGTTTGTTATTTCTTTTCTTTGTCATTGTTCCTTTCTGCTTGTCTCCTGCAGCATACTTCCATGTGATCTTGAGC TTTGTTGGTGATTAATATTTTATTACATTGTAGGTACTATTATGACAATCTCAAAAGATAGGGTAAAACCATCACCTCTT CCAGATAGCTGGAAGCTATCAGAGATATTTACTACCGGTGTTGTGCTTGGTAGTTACTTGGCAATGATGACAGTCATATT CTTTTGGGCTGCATACAAAACAGATTTCTTCCCGGTGTGTCTTCTTCAGCTTCAATCCCAAAGTACTTTCGGTCATATAT CTGAATGTATTCTGGCATCCATGCATGTTGCTTTGTCCCTTATTGCAGCTGTGCCTAGGACTCATTACTTTAATGATCTA ATGTTCCTAATTATATGTCAATGTCTATGTATGCCTTCATGGATTCTTCACTTGGCTTTTGTTTGTTTTGGGATGTCCAC TGATTTATCTTGTCTAATATTGTTTTCAGCGAGTGTTTGGGGTCTCGTCTCTTGAAAAAACAGCTCATGATGATTTCCGA AAACTGGCCTCTGCAATCTATCTCCAAGTGAGCACCATTAGTCAGGCTCTTATATTTGTAACTCGGTCTCGAGGCTGGTC ATATGTGGAGCGTCCTGGTTTCTTGCTGGTGGCTGCTTTTATTGTTGCTCAACTGGTAAGTCACATGACCGTTTACACTG TTGTAACTAATAATTATTTTTCATCCTGTCAAGTTTGGTGATGGATTTGTTGCATGTAGATTGCCACTTTGATTGCGGTG TATGCAAGCTGGAGTTTTGCTGCAATTGAAGGAATAGGTTGGGGTTGGGCTGGTGTAATATGGTTATATAACATAATCTT CTACATCCCCCTTGATTTCATCAAGTTTTTAACCCGCTATGCTTTGAGTGGAAGAGCTTGGGATCTTGTTATTGAGCAAA GGGTGAGTAGAGTTTGTTTTCTTGAGTTAGTTAATCCAAGGTTGGTTTTAATTTTTTCTTTCTTCTCATGGATTTTGTTG TCTTATAGATTGCTTTCACAAGACAAAAGGACTTTGGGAAAGAACAAAGGGAGCTTCAATGGGCACATGCACAAAGAACA TTGCATGGACTACAACCTCCTGACTCCAAGTTCACTGAGCGTACTCATGTCAATGAACTCAATCAAATGGCAGAAGAAGC TAAAAGGAGAGCTGAAATTGCAAGGTATCTAGAACCTAGATGCTCCCAATTAATTGTTTTTATTTGTTTACGAATTAAGT TGGGGATAAACATCAAAATATTGCACTCATGAACACAAGGGTATGCATATTTATATTACAAAACATTTGTAGTATAAGTC TGGAATTTATACATTCCATACAAGTTGGATCTAAGTTGCAAAATAAATAAGCTGGATCGATGCATTGTCATATATATTTT ATTACTTATACCACCACCACCACCACCACCGCCACTATCCTCACCATTCACCATCACTATTAATTCTCCTAGGGAATGAG ATTAGACATATCACATGTTTATGTCTTTCATGAGGGTTACATGTATTCCATATTTAAATTAAGTCGGTCCGCATGAACAT AGTTCTTCATTTATTTATTTCCTAATCATTGTGCAGGTTGAGAGAACTTCATACACTGAAAGGTCATGTAGAATCAGTTG TGAGGTTGAAGGGGCTCGACATAGACACAATTCAGCAAGCATACACAGTCTGA 

CDS sequence (LotjaGi4g1v0245100.6) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTGGAATCCTCTGTCTTGGGTTATGGAGGCAGCTGCTATAATGGCTATTGCCCTTGCCAATGGAGGGGGGAAGGCTCC TGATTGGCAAGATTTTGTGGGTATCATCACCTTGCTTGTCATTAATTCAACTATCAGTTTCATAGAGGAGAACAATGCTG GTAATGCAGCTGCAGCTCTCATGGCACGTCTCGCTCCAAAAGCAAAGGTTCTTCGAGATGGTAGATGGAATGAGCAAGAT GCCGCCATCCTGGTTCCAGGTGACATAATCAGCATCAAACTTGGGGATATTGTACCTGCAGATGCTCGTCTTCTTGAAGG AGATCCTTTAAAAATTGACCAGTCTTCACTCACAGGTGAGTCTCTGCCAGTGACAAAGGGCCCTGGTGATGGTGTATATT CTGGTTCTACCTGCAAACAAGGAGAGATTGAAGGTGTGGTCATTGCTACTGGTGTTCACACCTTCTTTGGGAAAGCTGCT CACCTTGTAGATACTACAAATCAAGTTGGTCACTTTCAAAAGGTCTTGACTGCCATTGGGAACTTCTGCATATGCTCAAT TGCTGTGGGGATGGTTATTGAGATTGTTGTTATGTATCCCATCCAACATCGGCGTTATCGTCCTGGTATTGATAACCTCC TTGTACTTCTCATTGGAGGAATTCCAATTGCCATGCCCACAGTTTTGTCAGTGACCATGGCCATTGGTTCTCACAGGTTA TCTCAGCAGGGGGCTATCACAAAAAGGATGACAGCCATTGAAGAAATGGCAGGCATGGATGTGCTTTGCAGTGATAAGAC TGGGACTCTAACACTAAATAAGCTTACTGTTGACAAAAATCTTGTTGAGGTTTTTGCAAAAGGAGTGGATCCTGATACTG TTGTCTTGATGGCGGCTCGAGCTTCTAGACTTGAGAATCAAGATGCAATAGATACAGCAATAGTTGGGATGCTGGCTGAT CCAAAGGAGGCACGTGCTGGAATACAAGAACTACATTTTCTTCCTTTCAATCCTACTGATAAGCGGACAGCATTGACTTA TACTGATCAAGATGGTAAAATGCATAGAGTAAGCAAAGGTGCACCAGAGCAGATCCTAAATCTTGCACACAACAAGGCAG ACATTGAACGTCGAGTTCATGCCGTGATAGATAAGTTTGCAGAGCGTGGTTTACGATCTCTTGCTGTATCGTACCAAGAA GTTCCAGATGGAAGGAAAGAAAGTGCAGGAGGCCCATGGCAATTCATTGGCCTTTTGCCTCTCTTTGACCCACCTAGGCA TGATAGTGCAGAAACAATAAGGAGGGCACTAAACCTTGGAGTAAATGTCAAAATGATTACAGGGGATCAGCTAGCTATAG GAAAGGAAACAGGCCGTCGATTGGGAATGGGCACCAATATGTATCCTTCATCTGCTTTACTTGGGCAGAATAAGGATGAA TCCATTGCTGCCTTACCCGTTGATGAATTAATAGAAAAAGCGGATGGGTTTGCTGGCGTATTTCCTGAGCACAAGTATGA GATTGTGAAACGCTTGCAAGCTAGGAAACATATTTGTGGGATGACTGGTGATGGAGTGAATGATGCTCCTGCCCTCAAGA AGGCAGACATTGGTATAGCTGTTGCTGACGCTACTGATGCAGCTCGTAGTGCATCTGATATTGTTTTAACAGAACCTGGC CTTAGTGTTATTATTTATGCAGTCTCAATTACAATTCGTATTGTGCTTGGTTTCATGTTGCTGGCTCTCATATGGAAGTT TGACTTTCCACCTTTTATGGTGCTGATTATTGCCATCCTAAATGATGGTACTATTATGACAATCTCAAAAGATAGGGTAA AACCATCACCTCTTCCAGATAGCTGGAAGCTATCAGAGATATTTACTACCGGTGTTGTGCTTGGTAGTTACTTGGCAATG ATGACAGTCATATTCTTTTGGGCTGCATACAAAACAGATTTCTTCCCGATTGCCACTTTGATTGCGGTGTATGCAAGCTG GAGTTTTGCTGCAATTGAAGGAATAGGTTGGGGTTGGGCTGGTGTAATATGGTTATATAACATAATCTTCTACATCCCCC TTGATTTCATCAAGTTTTTAACCCGCTATGCTTTGAGTGGAAGAGCTTGGGATCTTGTTATTGAGCAAAGGATTGCTTTC ACAAGACAAAAGGACTTTGGGAAAGAACAAAGGGAGCTTCAATGGGCACATGCACAAAGAACATTGCATGGACTACAACC TCCTGACTCCAAGTTCACTGAGCGTACTCATGTCAATGAACTCAATCAAATGGCAGAAGAAGCTAAAAGGAGAGCTGAAA TTGCAAGGTTGAGAGAACTTCATACACTGAAAGGTCATGTAGAATCAGTTGTGAGGTTGAAGGGGCTCGACATAGACACA ATTCAGCAAGCATACACAGTCTGA 

Protein sequence (LotjaGi4g1v0245100.6) extracted from Lotus japonicus Gifu v1.2 Proteins.

MWNPLSWVMEAAAIMAIALANGGGKAPDWQDFVGIITLLVINSTISFIEENNAGNAAAALMARLAPKAKVLRDGRWNEQD AAILVPGDIISIKLGDIVPADARLLEGDPLKIDQSSLTGESLPVTKGPGDGVYSGSTCKQGEIEGVVIATGVHTFFGKAA HLVDTTNQVGHFQKVLTAIGNFCICSIAVGMVIEIVVMYPIQHRRYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDPDTVVLMAARASRLENQDAIDTAIVGMLAD PKEARAGIQELHFLPFNPTDKRTALTYTDQDGKMHRVSKGAPEQILNLAHNKADIERRVHAVIDKFAERGLRSLAVSYQE VPDGRKESAGGPWQFIGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDE SIAALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG LSVIIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFTTGVVLGSYLAM MTVIFFWAAYKTDFFPIATLIAVYASWSFAAIEGIGWGWAGVIWLYNIIFYIPLDFIKFLTRYALSGRAWDLVIEQRIAF TRQKDFGKEQRELQWAHAQRTLHGLQPPDSKFTERTHVNELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIDT IQQAYTV 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SignalP_EUK 1 20 20 -
PANTHER 1 656 656 0.0
Phobius 1 177 177 -
CDD 1 699 699 0.0
Gene3D 1 85 85 2.2E-30
TIGRFAM 1 661 661 1.3E-288
PANTHER 1 656 656 0.0
SUPERFAMILY 1 705 705 1.7E-53
TIGRFAM 35 298 264 6.5E-39
Pfam 64 242 179 5.8E-47
SUPERFAMILY 66 163 98 8.63E-29
PRINTS 113 127 15 7.2E-43
Gene3D 128 278 151 7.4E-15
Phobius 178 201 24 -
TMHMM 178 200 23 -
Phobius 202 212 11 -
Phobius 213 235 23 -
TMHMM 213 235 23 -
Phobius 236 562 327 -
SFLD 245 569 325 0.0
SFLD 245 569 325 0.0
SUPERFAMILY 259 569 311 1.03E-38
Pfam 259 536 278 6.1E-18
PRINTS 263 277 15 7.2E-43
ProSitePatterns 265 271 7 -
Gene3D 279 418 140 1.1E-45
PRINTS 379 397 19 1.2E-37
PRINTS 417 428 12 7.2E-43
Gene3D 419 569 151 3.5E-48
PRINTS 439 449 11 7.2E-43
PRINTS 494 510 17 1.2E-37
TIGRFAM 497 569 73 6.1E-21
PRINTS 522 538 17 1.2E-37
PRINTS 522 541 20 7.2E-43
PRINTS 545 557 13 7.2E-43
PRINTS 553 578 26 1.2E-37
Phobius 563 585 23 -
TMHMM 563 585 23 -
Phobius 586 591 6 -
Phobius 592 608 17 -
TMHMM 592 609 18 -
Phobius 609 627 19 -
TMHMM 627 649 23 -
Phobius 628 647 20 -
Phobius 648 653 6 -
TMHMM 654 671 18 -
Phobius 654 672 19 -
Gene3D 656 704 49 2.5E-15
PANTHER 657 787 131 0.0
PANTHER 657 787 131 0.0
Phobius 673 677 5 -
TMHMM 675 694 20 -
Phobius 678 697 20 -
Phobius 698 807 110 -
Coils 758 778 21 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Nucleotide binding Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
Molecular function Proton-exporting ATPase activity, phosphorylative mechanism Enables the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) -> ADP + phosphate + H+(out). These transporters use a phosphorylative mechanism, which have a phosphorylated intermediate state during the ion transport cycle.
Cellular component Integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
Biological process Proton export across plasma membrane The directed movement of hydrogen ions (protons) from inside a cell, across the plasma membrane and into the extracellular region.

Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0245100.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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