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LotjaGi4g1v0248100.1

Overview

Field Value
Gene ID LotjaGi4g1v0248100
Transcript ID LotjaGi4g1v0248100.1
Lotus japonicus genome version Gifu v1.2
Description Protein kinase; TAIR: AT2G02800.1 protein kinase 2B; Swiss-Prot: sp|O49840|PBL3_ARATH Probable serine/threonine-protein kinase PBL3; TrEMBL-Plants: tr|G7JQX5|G7JQX5_MEDTR Tyrosine kinase family protein; Found in the gene: LotjaGi4g1v0248100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:60057021..60061206) extracted from Lotus japonicus Gifu genome v1.2.

AAAATGTGTAACCTTGTCTGTATATCCTAACAAATGTTAATGGGTTCATATGCATATAAAGCAATACGAAACAACACCAT AATTTGGTTCTTTGTTTTCGTGTTCTTCTCTGGAAACACGGGAGAAGGACATGATGCAAAAGAACAACAATACAATGCGT TAGGAGATTGACATGTGATGAAGGTCACATTGCATGCCGAGAATAAAGCTGAATTGATTTTTTTCTTTTCTGGGGTTTTC AAATAAGGTTGGTTGCTCTGATGGGAAATTGTTTTGGAGCACGTTCCAAGGTTGATGATAAACTTCTGAGTTTCCAACCC AGTTCTGCACCTTGTGGTATGTTTTTTCCCAACATGTTTCTTTTTATGTGCATGCAAAATAAATGTTATGCCATTGTTGA TATGGGAATTGGGAGATCATGATGTGTTTTTCTTATTTAGTTTCCAATAGTTGTCACTGCTTCCAGAGCGCAGAGTGACA TGTTTTTCTTCTGAGTTTCTCATATGATGTTTTGATTTTAGTTTAGAAGTGAGAATTATTTTCTTCCTGATGCGGTTTTG AAGGAAATGGTTGTGGTTTTTGAATATGCTTTGTTATTGACTAGGTCATCTTTTATCTAGTTGGTTATTAAGTCATTGTT AGTATGTATGAATGAATTTTTGGTGAACAATAAAATTTAGGGGGAGGGGATGGGACCCCGGCCAGTGCAAGGCACGGAAA TAGTATACTTATATTTACCTCACCCAAATTGGATGTATCAATGAATATAAAGCAAAACTATCTTCTTTTTTGTCTCAGTT GACAAAGTGAAATTCAATGTATATGCTTCTACTATGGTTTCTTAAGAGGACCTTTTTGTTTTGAATGTTGTAGTAGTCCC CACATACCAAATAGTGTGCTTGACAGCACCTCACTGTAATGTTTTCTCGTGCTTTCATTTTTATAGTTGGAAGGACGTAC TAGCAGGGTTTTAAAATTCCCGCAACCGCGTTGCGTAATTGCAGACAAAATGTGGTAGCAATTGTGGTCGCGATGCTGAT GCGGGCAGTTCAAATCCCTTTATGTTGCGGCCACGATTGCGGTCGCGAACCGCAATTTAAACCCTTGATTATAATAATTC AGTATTGGAGAAGTGATAATTAAAAAAATCTTTAGGACTTTGATATTCGTTTGTTGTGCATCTTATTTGGTAATCTTTAC AGATTACTCTTTTTGTTTCTTACAGAACAGCGTTTCCTTTTACTAAAATGAAAATCATTTTGTAGATGCTACAAAAGTTC CTCATAGAAGCACCCAGTTGTTAGCTCATACAGGTCCGACGGCGCATGGATACAGTAAAGGAGGTAAACCTGAGATTCTC CCCACTCCAAGATCTGAAGGAGACATACTTTCGTCCCCACACTTAACAGCCTTCACATTCAAGGATCTTAAGAATGCCAC TAAAAATTTTAGTCTTGATAGTCTAATTGGAGAAGGGGGATTTGGACATGTCTATAAGGGGTGGATTGATGGTCAATTCC TTGGGGCTACATGGCCTAGATCTGGAATGGTTGTAGCTGTGAAGAAGCTTAAGCCTGAAGGTTTTCAAGGGCATAAAGAA TGGCTGGTAGGTTGCTTCTATTCATGAGCCTTTAATTTTGCTGTTTTTTCATTGCCCTGAATGAATCAAACTCTACTCAT AGTTTACTTTGTTGTACAGTCTGAACTCAATTATCTTGGCCAACTTGATCATCCGAATCTTGTCAAACTTATTGGATACT GCCTGGATGGAGATAACCGACTTCTAGTTTATGAGTACATGCCCAATGAATGCTTGGAAAATCATCTGTTTCGCAGTATG TTGCTGCCTTTAGTAGCTTAAAAACCCTCTTGGATGTAGACTAAACAACACTTGTTGGATCTTATCTAGTGCTTTTTTTA GTAGATAACCTCTAATAAGTGTTCTTTGGTTCATATCCAAACAGACTCTAAGTAATTTCATAGAGGAGTACACTTACTAT GGTCTGATATAACATTTAGCAAATCAAGCTATCAAATATGTTTGATATCACCTAAATTTTTTCAAAACGTGCCACTGAAT ATGCTTTAATCAATGTGGAACTGTTAATTGTAGAGGAAAAACTACTTCCTTGGGCAACAAGAATCAAAGTTGTTGTTGGT GCTGCTCGAGGTCTCACCTTCCTACATGACTCTGATCAACAAATTATCTACCGTGATTTCAAGGCTTCTAATATTTTATT AGATTCGGTATGTTGGTAAAGTATTAGCACTGCAATGTTTCTGTGGCTTGTGGGAATTTGGGGAAAATACTTGCAAACTA TGCATGGGTTGGTGTAACCCTCAATTAGCTACATCTTTTATTTTTATTTTCTTCTCATCTATTTTATTCTTAACCCTTCT TCCTTTCCTGGTCATTTAAAATAAAATGCATTCCTAGATTTAATGAAGCAGCTCACTTTCAATCGATGATTGAAAGTTCA ATTTAAATTTAGTATCCTAGTAGTCCATCAGCTTCTTTTTCTCATTATCAATTCTGACACCTAACTTCTCCGTAGATTTG ACTTTGGCTCTAGTATCAACAATAGAATGATTTTCAAACATGAACTTAATATGTTTTAATACAAATGTAGGAATTTAACG CAAAACTCTCAGACTTTGGATTGGCCAAAGCAGGACCCACTGGTGATCGTTCTCATGTTTCCACTCAAGTCCTGGGCACG CAAGGCTATGCTGCCCCTGAATATATTGCTACAGGTTTGATCTTTGCTTTTTTTTTCATGCTTTCTGGTTTATAAAAAAT ATGTTGTCCTCTTAAGTGAAATGACTCGTTATCCTCTTTTTGGGGAGCAATGTTGTGCTTTGTCTTGCAAAATATTTTGA TATAACATTCACCTATTACTAGCTCACAATTGTTTTTGTCACAACGCAAAAATATGTTCTGAAAACAAAAAATTCTTAAC AGTCGAAATTGTATTTAAAATTTTGTCTTTGGGGTATTATTTTACATTCTATGTACGTTATCAGGTCGGCTGACCACGAG GTGTGATGTCTATAGCTTTGGGGTTGTGTTGTTGGAACTACTCTCTGGGCGCCATGCTGTTGACATAACAACATCTGGAG TAGAACGTAATCTAGTTGATTGGGCAAGACCCTATTTGGATAATAGGAGGAAGTTGTTCCGGATCATGGACACCAAGTTA GAAGGACAGTACTCTCAGAGGCAAGCTTGTGTAATTTCAAGCCTTGCATTACAATGTATTAGTGAGGCCAAGATTAGACC ACAGATGTCTGAGGTTTTGGCTACCTTGGAGCACCTTCCAGTCATGAGACATTCACGTAACCCGTCTAGAGCAGAGGAAA AGTCCACAAGTCCCATAAGAGAAGGGATCTGAACTCTGAAAGTCCAATGGTAAAATTCCCTTTGAGACATAATCATCATT CTCATTTGTTACAGTTCTGAGAGGCTCCCCCATTGCCAACCTCAACAAAATTTGTGAAATTCTGAAATCCCAAAGAGGAA AATAATACATGGGAGTTTTTTCTCTTCAAGTATGCCTCTGTATATCCTCTTCCTTTTTTTGTGCATGTTTGGATACATAG TAGAAAATCACGGTGAGCTTAAATCACGGTTGATAGAAACAACTTCAATTCCCTTAATTTTTGTGATTGTCTATCGTGAT TTTGACTTCACCCTGTTTTTTCACCGTGCATTCAAATATGCACTGTGGGTCGTCTTAGGTGATAGCATGTATGATTAGAG TGTTCTGTAGACTTTTACCTTAACTTTACTTTACCTGTAGAGTCATAGAGACATATCATCACCCTCAAAACGCATTGTTT TGTCCATTCTGTATCAGGAGGAATTACTAACTGCGTGTTTCAAAGTCCATCTACAATTTATTCTAAAGTGATAAAAAAAA TTACGGAGAAGCTTTTGAGTAGCTTCTGGGTGTTATAATTGATTATTAGGAAAGAGAAGTTATCCAAAAATGCTAGTAAT CATTGTAGCATTCCTGTAACAAGTTGTCGGTGATAACTGTTCAATGACAAGAATTTCAGTTAGTTGCATGTAAATGGTTC TAGTTTACTCTCTCAAAAGCTTTCCTGTTTCTGTATAAAATTACTGGTTTTGGAGTGGAATGTGATTGCTGATAAGCTTG AATAGTCATTGACATGGTGATTGTTG
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0248100.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGAAATTGTTTTGGAGCACGTTCCAAGGTTGATGATAAACTTCTGAGTTTCCAACCCAGTTCTGCACCTTGTGATGC TACAAAAGTTCCTCATAGAAGCACCCAGTTGTTAGCTCATACAGGTCCGACGGCGCATGGATACAGTAAAGGAGGTAAAC CTGAGATTCTCCCCACTCCAAGATCTGAAGGAGACATACTTTCGTCCCCACACTTAACAGCCTTCACATTCAAGGATCTT AAGAATGCCACTAAAAATTTTAGTCTTGATAGTCTAATTGGAGAAGGGGGATTTGGACATGTCTATAAGGGGTGGATTGA TGGTCAATTCCTTGGGGCTACATGGCCTAGATCTGGAATGGTTGTAGCTGTGAAGAAGCTTAAGCCTGAAGGTTTTCAAG GGCATAAAGAATGGCTGTCTGAACTCAATTATCTTGGCCAACTTGATCATCCGAATCTTGTCAAACTTATTGGATACTGC CTGGATGGAGATAACCGACTTCTAGTTTATGAGTACATGCCCAATGAATGCTTGGAAAATCATCTGTTTCGCAAGGAAAA ACTACTTCCTTGGGCAACAAGAATCAAAGTTGTTGTTGGTGCTGCTCGAGGTCTCACCTTCCTACATGACTCTGATCAAC AAATTATCTACCGTGATTTCAAGGCTTCTAATATTTTATTAGATTCGGAATTTAACGCAAAACTCTCAGACTTTGGATTG GCCAAAGCAGGACCCACTGGTGATCGTTCTCATGTTTCCACTCAAGTCCTGGGCACGCAAGGCTATGCTGCCCCTGAATA TATTGCTACAGGTCGGCTGACCACGAGGTGTGATGTCTATAGCTTTGGGGTTGTGTTGTTGGAACTACTCTCTGGGCGCC ATGCTGTTGACATAACAACATCTGGAGTAGAACGTAATCTAGTTGATTGGGCAAGACCCTATTTGGATAATAGGAGGAAG TTGTTCCGGATCATGGACACCAAGTTAGAAGGACAGTACTCTCAGAGGCAAGCTTGTGTAATTTCAAGCCTTGCATTACA ATGTATTAGTGAGGCCAAGATTAGACCACAGATGTCTGAGGTTTTGGCTACCTTGGAGCACCTTCCAGTCATGAGACATT CACGTAACCCGTCTAGAGCAGAGGAAAAGTCCACAAGTCCCATAAGAGAAGGGATCTGA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0248100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGNCFGARSKVDDKLLSFQPSSAPCDATKVPHRSTQLLAHTGPTAHGYSKGGKPEILPTPRSEGDILSSPHLTAFTFKDL KNATKNFSLDSLIGEGGFGHVYKGWIDGQFLGATWPRSGMVVAVKKLKPEGFQGHKEWLSELNYLGQLDHPNLVKLIGYC LDGDNRLLVYEYMPNECLENHLFRKEKLLPWATRIKVVVGAARGLTFLHDSDQQIIYRDFKASNILLDSEFNAKLSDFGL AKAGPTGDRSHVSTQVLGTQGYAAPEYIATGRLTTRCDVYSFGVVLLELLSGRHAVDITTSGVERNLVDWARPYLDNRRK LFRIMDTKLEGQYSQRQACVISSLALQCISEAKIRPQMSEVLATLEHLPVMRHSRNPSRAEEKSTSPIREGI
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR45621
40 385 346 1.7E-179 –
PANTHER
PTHR45621:SF72
40 385 346 1.7E-179 –
Gene3D
G3DSA:3.30.200.20
59 172 114 1.2E-33 –
SUPERFAMILY
SSF56112
65 366 302 1.13E-76
IPR011009
ProSiteProfiles
PS50011
87 370 284 36.739
IPR000719
Pfam
PF07714
89 319 231 1.5E-43
IPR001245
CDD
cd14066
93 368 276 4.53642E-93 –
ProSitePatterns
PS00107
93 126 34 -
IPR017441
Gene3D
G3DSA:1.10.510.10
173 387 215 6.5E-55 –
ProSitePatterns
PS00108
215 227 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0248100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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