Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0275400 |
| Transcript ID | LotjaGi4g1v0275400.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | CCR4-NOT transcription complex subunit 10; TAIR: AT5G35430.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q08CL8|CNO10_DANRE CCR4-NOT transcription complex subunit 10; TrEMBL-Plants: tr|A0A0L9TRF8|A0A0L9TRF8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0275400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:64571331..64578962) extracted from Lotus japonicus Gifu genome v1.2.
GATGATCCCCATATTTGATATGTTCCCTATGTAGACGTTTTTTGCTCATAGTCCGGAAATCTTCACATTAATGTTATGAG CAATTTATTTATTTTTAGTAAATATTCATGAGTTACACTTACACAAAAGAAAATGAAAAAAATGAAAAATAAAAACCTTC CACCCTCTTTCTATCTTCACCTCCCTCGATTCGGCGAATAGGTTTTCATTCATTCTCGCACTTCACCCTTTCCCCCCTTC TCTCTCACTCTCTCATATCCAAACACACAACGAGGGTTTCTCACTTTCTCTTCTCATCAAACTCGTTCGCTTCTTTTAAC TTCGATTCTTCTCTGAATGTAATTCAGATTCATTTCACTTCGCTCTTCGGTTTTTAGGGCTTTGCTTCTTCTCTCTCTCT CTCTCTCTCTTCCCCAAAACCCTCTCTCTCTCTCACTCTGAGATTTGTATCTTGATTGCTCGATCTCGCCATGGAGAATC GAGATTCGTCATCGTCGTCGCCGTCGTCCGCCACCAATCGCGATGCTTCCTCCGCCACCGACGCCGACGACGGGATTTTC ACGGTTACTGTCGCGCTTGCTAAAGATGCTGCGTTGCATTTTCAGTCTGGGAAGTTCGCTGAATGCGCTGAGGTTTTGCA CCAGCTTTTGCAGAAGAAGCAGGACGATCCGAAGGTATTCAATTTGTTTTGTCAATTTTTGTAGATACTGATCTCACTCA CAAATGCTGGATGCTTCTAGTGTTAATTGACTCTTGTTCTTTCATGCTTTTCTTTTGCTGCTTCGATTTTTGGTTTTAGT TTTTGTACTGATTGCTGTGCTGCGAGTGATTGATTTGTTGGTTCGTTTTTATCTATTGATTTTTCTAAGAGTTGAATTTT GATCCCGGTACGTTTCGGGAGCTGTAGCTAGTATTGTAACCAGTAAGCACTTTAAGTTTACCTGCTGTTGCTATAGATGC AAATATACATTGGATTATCTGTTTTATATGAATTTCCTCCTGGTAGCAAGCATGTAATTGGGCTGGAAAAGTTGTATCAT AATCTGCTTCGAGTAGATGCTTGTGGTTGTGGCTATGCATTTGTGCTGTTTACTGTGTGCTGTGTGATGTAAGTAGCAAA TAAGAACATTGAACATAAAGAGGAACTTATTAGACTTGTAGAAGAAAAAGCTAAGGTGGATCTAGCATGGGAAGTGTAAT TGACATGATTTGGCCAGAATAGGGATTTTGAGCTCATTCTCTGAATACGGACAATCTTTAAGATTTTGATTCCGTTGTCG TGTTGTTAGTTTTGCTTCTTGATGCTAATGATACTTGATTGGCGGTATAATGGTATACAAGTTCGTTACTGGTTATAAGG AGAATCTTTAAGATTTTGATTCCATTGTCGTGTTGTTAGTTTTGGTTGTTGATGCCAACGTTACTTGATTTGCGGTATAA TTGTATAAAAGTTCGTTACTGGTTATATGCACAACATGTAAGATTTTGATTGTCGTGATGTTAGTTTTGGTTCTTTATGC TAACGATACTTGATTTGTGGCATAATTGTATACAAGTTCGTTACTGGTTATATGGACAGTATTTAAGATTTTGATTCTGT TGTCGTGTTGTTAGTTTTGGCTCTTGATGTTAGCGTTGCTTGATTTGCGGTATAATTGTATACAAGGTTGTTACTGATTG CACGTGTTACTCACTCTGAGGTAACGTAAAAATTTGTGTTATGATATTTGCACTCTCTTACATCCACTTACTCCTCACAT ACTCCTACACGTGTCTGGTAATACCTTGGTCGCAATAACTTTTTTGCTGAATGGTTCAGATGGTGCTCATATTTCACATG CTTTGTGCAAGTACCTTTACCACATTAAATCCACCCGTATTATCTGTTAGCCGGGATTAAACATACTTTGAACTGATGTT CATGTCTCAAACTGGCTTGAGTTAAAAAGGTTTTGGTGAATGTAACAAATCCAATCACACACTTAACCATAAGCCTCAGA AAACAAAATCATCTGCCAGAAATGAAAATGAAAACAGTGCCAAATAAGATGCCCATGTAGTGCAACTGTGCAAGTAACTT TGTGAAGTTTCTAATGACTGTGAAGCTCTTGTCACAAAAGAATGAAAACAGAGTAATGAATTAATTTAATAAGGTGCATT GAATTTCAATAATGCTCCTTTAGTTCTTACTTCTTATGCATTTATATGTAATTCTCACGATTCACTGATTCATATATTTA TTGCATGATTCAAAGTAATTTGTAATTCGTCATATGATATGAATCACTGCTTGCTTAATTGTGTTGCATCATGTGATTTG TGAACTGTGCGATTATGGCAACTATGATTAGAGAGACCTTGGAGTTACTATACCTGCAAAAGTGACTGTTATGGAATAAA TAAAATGGACCTTTACCATTTGCCTGTTTATGTATGTGTGTTTTTTAAAAAGCATAATTCGGGGGCTATATTGCTCTGAA CATATTAAGCATCTCAGAAAAATATACAACTGAAAAAATATATATTTGTGATTCATTCCGTTGATGGAATTTGAGGCATA TTTATGCTTGTAGAATGATAAAATTCCTTATCATATTCAAGCCTGTTAAGAGTGAAAGAGGACAATGATTTTGGTGGATT TGCGGGTTTATATAACCTACTAAGCGTTATCTTTATGTTCTGTCCTTTCTGATATTGTCTAAGACTTTTTTTCTAAAACT TAATGTCTAAGGTTTTGAATCCTAATATTTCAGGTCCTCCATAATATTGCAATTGCGGAATTCTTTCGAGATGGTTGTTC AGATCCCAAAAAGTTGCTTGAAGTAATTAAAGGAATCAAGGTATGCTTTTTATTTCTGCAAAGTGGCAGTTTTATGAAAG CTTTTGTTTCTCATGGTTAGTATTTAAGGAAACCATTTGTTTTAACCTTTTTGGAGCACTAGCACCAATTGCGAATACGA TGTCAAAATTAAAATGAAAATTGACCTGGCTCAACATGGGCTCTTTTAAACTCAATGTCAGTAATTTTTTAGCCTTTCTA CTGATTCATGCAAATTTTTTTTGGGTCAGGGCTTAATTGGCACCCGACTTCAGTTGGTAGAATGAGTGTTTAATATGTAG AAGGTCATATATGTTTCTGATATTTTCTCATGATTATAATCTGTGAGTTTGAATTTCTTCATCGAAATAAGAATGAAGAT ACCCAGTATGCTGTGGTTGATGACGCATTCTCCTTCAAAATCCTTATTCTGGGGGTTCTTATTTGTGATTTTTGTTAAAG GAGGAAAATGTATATGCAGATCACTACCTGAATGATAATATTAAAGTTAGGAAATACTGGTGTGCAAGAGTTATATAGGA TTTCATTCATAAGTATGTAGGTTCTTATTTCATTCATATCTGTGCTTATTTGTAATCTTGTACTTATCCCTGTTTTTTGG AGTTGATTCAGAGAACAAATGATGAGCATACTCAGACTTCTGGAGAACAAGGAGAATCACTTAACAATGCCGGGAGTAAA GACGTTTCGGGATCCAAAGGAAGTAACCCTTCTGCACTTCAGTTTTCAGGTGCAAATAGCACCACCACAATTCATAAAGA TGAATTTGACTCTTCTGTGGCAATGCTAAACACTGTAGGTTCATTTTTCTCCTTATATTAGTTTCATTTATTCTGTTCTT TTGATTATGTTTGTGATGAATGTTTGCTGATGTGCTTGTATTTCAATCTCTCTAGGCCATTATCTGGTTCCATCTTCATG ACTATGCAAAGACATTATCAGTTTTGGAACCCCTCTTCCAAAATATTGAACCTGTAGATGAGGTATGTCATATATTATTT GCTACTTTGTTTTAAAAATTACACTGGTTTGTTAATGTTTTACATCCCTTTTTTGTGTTATGTTTCCTAAAGCAGACAAC GGCTCTACATATTTGCCTTTTGCTGCTTGATGCTAGCCTTGCTTGCCATGATGCATCAAAATCAGCTGTAAGTTCCATTT GATAATTTGGTTTACATTTTAATTATTGCAAGTTTTGTTGCTTAATGCATTGCTGCCAACTGTGTTTCAATCTCATGAGT GTATTGTGCTTTTTACCTTTTCTTTAGTTTGCAGCTAGTTAATTATTTACTGATTATAAATTAGCTGTAACATTATTTAT TAGGATTTGGATCTTCTCATTTTGGTTCCTAACATAAAAGCTTGTTACTTTTTAGGGGTAGGGAGAGCTAGAGACTACAT TAAATGTGGGCCCCACTGTAATAGTTGTATATAATTGTTTGTTGTTTATCTCTTTTTGAAAACTCTACCCCAGTTTCTCT TTTAATGAGGTCAAACTGAGTTTACAGTGCATAAACTTACTTGATTTGATTGTTTTCTCTGATAGAATATGATGCAAAAC TTTCTTGGCAGTTGGTCTATATTTCTCTCTCTCTCTCTCTCACACATAATTATGTTATTGAGTGAATGTCTTGAAAGAAT TTCATTGTTTTCGGCTTTTTAGCTTCTCTAATTCTACAAGTGTACTGTTCTGAGCTGGAATCTATTTGTTTAGGATGTGT TGACTTATCTGGAAAAAGCATTCGGTGTTAGTAGCGTGAGTCAAGGTGACAGTGGGAACACAGCACAACAGCAATCTGCA AATCTAATTACAAAGTCTGCACCAGTCACCTTGAGTGCATCAGCTGCTGATGCATCCAGTTCTGATCTAGGGTCAACTGC TAATGCATCTGAAAATCATCTGTCCAGAGCTGAATCTGAAGATACACTTGATTATGAGGCCATGATTGTGGATATGGGTG GACAAAGTTTAGCCAGGGCAATGGGTCCATCTTCAAATGATATTTCTAGGGCTTCGGTTGACAGGTTTTCAACTGTTGAT TTGAAGCTTAAGTTGCAGCTTTACAAGGTTCAGTTTCTTCTTCTTACTAGGAACCTAAAGCTAGCCAAGAGAGAAGTTAA GCTGGCTATGAACATTGCACGTGGAAGAGATTCACCTATGGCTCTTCTTCTGAAATCTGAGCTTGAATATGCTCGTGGTA ACCACCGCAAAGCAATAAAGCTATTGATGGCATCAAGTAATCGAACAGACACAGTTTTCTCAAGCATTTTTAACAACAAT CTTGGGTGCATTTACTATCAGCTCGGGAAATATCAGACATCCTCATTATTCTTCTCAAAGGCTTTAACTAATTGTTCGTC CCTGCGAAAGGACCAACCATTAAAGCTAGCCACTTTCTCGCAGGATAATTCTCTCCTTATAATGTACAACTGTGGTGTGC AGTACTTGGCTTGTGGGAAGCCAGTACTTGCTGCTCGGTGCTTCCAGAAGGCAAGTTTGGTCTTTTACAAACAGCCTCTC TTGTGGCTCCGACTCTCAGAATGCTGTCTGATGGCTTTAGAAAAGGGCCTAATAAAATCAAATCGGGTTCCTTCAGAAAA TTTAGAGGTTGGAGTTTGTGTTGTTGGGATGGGAAAATGGAGGCAACTTGTTGTGCAAGATCAAATTCCAGGAAAAGGAA ATGTGGACTCATCTGAAGGGAATGATTGCTTTTCAAGTGAAAATGGGCGGCAGAAGTTATCGATGTCCCTTGCCCGACAG TGCCTCTTGAATGCTCTGCACTTGCTGGACTCCTACAGTACAAATTGTTTGAAGTCTGGTTTGCCCTCTAATTCTTCAGT GGAAGAAATTGATCCAAATGAAGTGTCACTGTCAAAGAGTTCGAATCTTAAAAACTTGCATGGGGTTGATTCAAAGGCAT TTTCTGTAGCAGTAGGCTTAGGTCAGGTTAATTCAAATGGGGACGTAAAAGAACAAAAGGGAGGAACTAGTCAGGAACTC ATTCAGAACTCTCTCTCCTATTATGAAGATGTCCGTAGAAGAGAAAATCAATTGATCAAGCAAGCTGTTCTTGCTAATTT AGCATTTGTGGAGCTAGAATTGGACAATCCTGTGAAGGCACTGTCAGTTGCAAAACGTCTCCTAGAACTTCCAGAATGTT CCAGGATTTACATCTTTCTAGGTCGTGTTTATGCAGCAGAGGCTCTCTGCTTGCTAAACAGACCAAAAGAAGCTGCTGAG CTCTTGTCAATTTATTTGTCAGGGGGAAACGATGTTGATTTGCCATTCAGCCAAGAGGACTGTGAGAAATGGCAGGCGGA GAGGACTGCTGAATTTGAAGAGGTAAATGGAGGATCCACTGCTACCAATAATTCTTCTTTTGAGGACACTCGAAGGATTG TTTTCCTCAAACCAGAGGAGGCACGGGCTACAATTTATGCAAACTTCGCAGCATTATCTGCCATGCAGGGTGAATTTGAG AAAGCAAATGTATTGGTTACGCAGGCATTGTCCATATTACCCAACAGTCCAGAAGCCATACTTACTGCAGTTTATGTGGA TCTCTTGGTTGGCAAGCCACAGGAAGCTCTAGCCAAATTAAAAAGTTGTAGCCGAATTAGGTTCCTTCCTAGTGGAGTAG CATTGAATAAATCTTCTTGAATGTTGTATGCTTGGATTTGTCATTGTGCCTGGTCCACCTCTCAGCGTTAGTTAGCAGGT AGCTTAATCCTTCCATAGCATTTGTAACATATATAAGTTCAATTCAGAGAACAATTTTTTTATGATTCGTTTTCCTTTAT AATTCTCAAATTTAGGGTTCACTTACAGGGGGTGGCTGTGTCTTGTTTAGTGCTGGTGCCCACCTTTGAAATTTGAGGTG TAGATCTGATTCGGATTGTTTTTACTTTTTAGAGGCTAATTTAGTCGATATTCAAGAATTGATGTCATGTGCTTATATTG AGAAAACTGAAAAGTTGATATTTATTCTGGAATTCCATTTTTAACCTGTTGGAGTTCGCCCTTCCTGATTCTCACACCCC ATGTACATATGTTTTTGCTCGGGCTGGTGATGCAGCAACATGATAGATGCTTTTCTTTTTCTGTGTTTTGAAAAAGTGGA ACTGATGATGTTTGATTCTTCACTCTTGTAAGGAAAGCCCATCTGGCAGGCAAACTTTTCAAGGTCAGAAACTTAACAAA AGAGTCTAAACATGGATTGAGTTATATTAGTTTGAGTGATCCTGATATGGGAAAGCTGTACTTTTTAGCACTTGGATTGA AATGCCCGTTTTCACTTGAAGCGAAGTTTTTAATAGCTAATAGCATGATTGGATAATAGTCGTGCTATGTAGCAAGCTTC TTAGCGTATGTTTGGTTTGAAGTCTAAGTGTGTGTTTGGTTTCAAATCTGGAGAGGCCAAACGTGGATCTAGAAATTTAA AAACAACTATTTCTTGCTTCTGAAAACGTGGATCGGGGCCAAACGTAGATCTGATTGAGTTTTCCAAACACACACTAATA CTACTAGATGTCTAGATGTGGATCCATTACTACTGATCTCTTATTATTGCTTCAATTTGACGTGGATCCTTACTAGACAT GGATCCGCTTCCAAACACACACTTATATGTCCCTCCCGTCTCTAAAGATATGAGATTAGATTTGTCCCGAAGGGCAAGAT TCCCACTATATTTTGAGGCTAAAAGTTATGCAAACGAGAGAAAATTGCAATTAGGGTGGGCCTAAGATGTCTCATAATCT CAATTGAAAGCGGTCCAGTTATTGCCTTTGAT
CDS sequence (LotjaGi4g1v0275400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAATCGAGATTCGTCATCGTCGTCGCCGTCGTCCGCCACCAATCGCGATGCTTCCTCCGCCACCGACGCCGACGA CGGGATTTTCACGGTTACTGTCGCGCTTGCTAAAGATGCTGCGTTGCATTTTCAGTCTGGGAAGTTCGCTGAATGCGCTG AGGTTTTGCACCAGCTTTTGCAGAAGAAGCAGGACGATCCGAAGGTCCTCCATAATATTGCAATTGCGGAATTCTTTCGA GATGGTTGTTCAGATCCCAAAAAGTTGCTTGAAGTAATTAAAGGAATCAAGAGAACAAATGATGAGCATACTCAGACTTC TGGAGAACAAGGAGAATCACTTAACAATGCCGGGAGTAAAGACGTTTCGGGATCCAAAGGAAGTAACCCTTCTGCACTTC AGTTTTCAGGTGCAAATAGCACCACCACAATTCATAAAGATGAATTTGACTCTTCTGTGGCAATGCTAAACACTGCCATT ATCTGGTTCCATCTTCATGACTATGCAAAGACATTATCAGTTTTGGAACCCCTCTTCCAAAATATTGAACCTGTAGATGA GACAACGGCTCTACATATTTGCCTTTTGCTGCTTGATGCTAGCCTTGCTTGCCATGATGCATCAAAATCAGCTGATGTGT TGACTTATCTGGAAAAAGCATTCGGTGTTAGTAGCGTGAGTCAAGGTGACAGTGGGAACACAGCACAACAGCAATCTGCA AATCTAATTACAAAGTCTGCACCAGTCACCTTGAGTGCATCAGCTGCTGATGCATCCAGTTCTGATCTAGGGTCAACTGC TAATGCATCTGAAAATCATCTGTCCAGAGCTGAATCTGAAGATACACTTGATTATGAGGCCATGATTGTGGATATGGGTG GACAAAGTTTAGCCAGGGCAATGGGTCCATCTTCAAATGATATTTCTAGGGCTTCGGTTGACAGGTTTTCAACTGTTGAT TTGAAGCTTAAGTTGCAGCTTTACAAGGTTCAGTTTCTTCTTCTTACTAGGAACCTAAAGCTAGCCAAGAGAGAAGTTAA GCTGGCTATGAACATTGCACGTGGAAGAGATTCACCTATGGCTCTTCTTCTGAAATCTGAGCTTGAATATGCTCGTGGTA ACCACCGCAAAGCAATAAAGCTATTGATGGCATCAAGTAATCGAACAGACACAGTTTTCTCAAGCATTTTTAACAACAAT CTTGGGTGCATTTACTATCAGCTCGGGAAATATCAGACATCCTCATTATTCTTCTCAAAGGCTTTAACTAATTGTTCGTC CCTGCGAAAGGACCAACCATTAAAGCTAGCCACTTTCTCGCAGGATAATTCTCTCCTTATAATGTACAACTGTGGTGTGC AGTACTTGGCTTGTGGGAAGCCAGTACTTGCTGCTCGGTGCTTCCAGAAGGCAAGTTTGGTCTTTTACAAACAGCCTCTC TTGTGGCTCCGACTCTCAGAATGCTGTCTGATGGCTTTAGAAAAGGGCCTAATAAAATCAAATCGGGTTCCTTCAGAAAA TTTAGAGGTTGGAGTTTGTGTTGTTGGGATGGGAAAATGGAGGCAACTTGTTGTGCAAGATCAAATTCCAGGAAAAGGAA ATGTGGACTCATCTGAAGGGAATGATTGCTTTTCAAGTGAAAATGGGCGGCAGAAGTTATCGATGTCCCTTGCCCGACAG TGCCTCTTGAATGCTCTGCACTTGCTGGACTCCTACAGTACAAATTGTTTGAAGTCTGGTTTGCCCTCTAATTCTTCAGT GGAAGAAATTGATCCAAATGAAGTGTCACTGTCAAAGAGTTCGAATCTTAAAAACTTGCATGGGGTTGATTCAAAGGCAT TTTCTGTAGCAGTAGGCTTAGGTCAGGTTAATTCAAATGGGGACGTAAAAGAACAAAAGGGAGGAACTAGTCAGGAACTC ATTCAGAACTCTCTCTCCTATTATGAAGATGTCCGTAGAAGAGAAAATCAATTGATCAAGCAAGCTGTTCTTGCTAATTT AGCATTTGTGGAGCTAGAATTGGACAATCCTGTGAAGGCACTGTCAGTTGCAAAACGTCTCCTAGAACTTCCAGAATGTT CCAGGATTTACATCTTTCTAGGTCGTGTTTATGCAGCAGAGGCTCTCTGCTTGCTAAACAGACCAAAAGAAGCTGCTGAG CTCTTGTCAATTTATTTGTCAGGGGGAAACGATGTTGATTTGCCATTCAGCCAAGAGGACTGTGAGAAATGGCAGGCGGA GAGGACTGCTGAATTTGAAGAGGTAAATGGAGGATCCACTGCTACCAATAATTCTTCTTTTGAGGACACTCGAAGGATTG TTTTCCTCAAACCAGAGGAGGCACGGGCTACAATTTATGCAAACTTCGCAGCATTATCTGCCATGCAGGGTGAATTTGAG AAAGCAAATGTATTGGTTACGCAGGCATTGTCCATATTACCCAACAGTCCAGAAGCCATACTTACTGCAGTTTATGTGGA TCTCTTGGTTGGCAAGCCACAGGAAGCTCTAGCCAAATTAAAAAGTTGTAGCCGAATTAGGTTCCTTCCTAGTGGAGTAG CATTGAATAAATCTTCTTGA
Protein sequence (LotjaGi4g1v0275400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MENRDSSSSSPSSATNRDASSATDADDGIFTVTVALAKDAALHFQSGKFAECAEVLHQLLQKKQDDPKVLHNIAIAEFFR DGCSDPKKLLEVIKGIKRTNDEHTQTSGEQGESLNNAGSKDVSGSKGSNPSALQFSGANSTTTIHKDEFDSSVAMLNTAI IWFHLHDYAKTLSVLEPLFQNIEPVDETTALHICLLLLDASLACHDASKSADVLTYLEKAFGVSSVSQGDSGNTAQQQSA NLITKSAPVTLSASAADASSSDLGSTANASENHLSRAESEDTLDYEAMIVDMGGQSLARAMGPSSNDISRASVDRFSTVD LKLKLQLYKVQFLLLTRNLKLAKREVKLAMNIARGRDSPMALLLKSELEYARGNHRKAIKLLMASSNRTDTVFSSIFNNN LGCIYYQLGKYQTSSLFFSKALTNCSSLRKDQPLKLATFSQDNSLLIMYNCGVQYLACGKPVLAARCFQKASLVFYKQPL LWLRLSECCLMALEKGLIKSNRVPSENLEVGVCVVGMGKWRQLVVQDQIPGKGNVDSSEGNDCFSSENGRQKLSMSLARQ CLLNALHLLDSYSTNCLKSGLPSNSSVEEIDPNEVSLSKSSNLKNLHGVDSKAFSVAVGLGQVNSNGDVKEQKGGTSQEL IQNSLSYYEDVRRRENQLIKQAVLANLAFVELELDNPVKALSVAKRLLELPECSRIYIFLGRVYAAEALCLLNRPKEAAE LLSIYLSGGNDVDLPFSQEDCEKWQAERTAEFEEVNGGSTATNNSSFEDTRRIVFLKPEEARATIYANFAALSAMQGEFE KANVLVTQALSILPNSPEAILTAVYVDLLVGKPQEALAKLKSCSRIRFLPSGVALNKSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 22 | 22 | - | – | |
| MobiDBLite | 1 | 23 | 23 | - | – | |
| PANTHER | 14 | 852 | 839 | 7.0E-240 | ||
| SMART | 33 | 66 | 34 | 79.0 | ||
| SUPERFAMILY | 38 | 841 | 804 | 1.52E-12 | ||
| MobiDBLite | 101 | 137 | 37 | - | – | |
| MobiDBLite | 106 | 137 | 32 | - | – | |
| MobiDBLite | 259 | 273 | 15 | - | – | |
| MobiDBLite | 259 | 279 | 21 | - | – | |
| Gene3D | 319 | 495 | 177 | 2.1E-10 | ||
| SUPERFAMILY | 328 | 426 | 99 | 3.51E-5 | ||
| ProSiteProfiles | 395 | 428 | 34 | 5.841 | ||
| SMART | 395 | 428 | 34 | 1.3 | ||
| SMART | 445 | 478 | 34 | 140.0 | ||
| ProSiteProfiles | 783 | 816 | 34 | 9.058 | ||
| SMART | 783 | 816 | 34 | 24.0 | ||
| ProSiteProfiles | 783 | 816 | 34 | 8.113 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Cellular component | CCR4-NOT complex | The evolutionarily conserved CCR4-NOT complex is involved in several aspects of mRNA metabolism, including repression and activation of mRNA initiation, control of mRNA elongation, and the deadenylation and subsequent degradation of mRNA. In Saccharomyces the CCR4-NOT complex comprises a core complex of 9 proteins (Ccr4p, Caf1p, Caf40p, Caf130p, Not1p, Not2p, Not3p, Not4p, and Not5p), Caf4p, Caf16p, and several less well characterized proteins. |
Expression pattern of LotjaGi4g1v0275400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…