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LotjaGi4g1v0277400.3

Overview

Field Value
Gene ID LotjaGi4g1v0277400
Transcript ID LotjaGi4g1v0277400.3
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Receptor-like kinase; TAIR: AT2G11520.1 calmodulin-binding receptor-like cytoplasmic kinase 3; Swiss-Prot: sp|Q9ASQ5|CRCK3_ARATH Calmodulin-binding receptor-like cytoplasmic kinase 3; TrEMBL-Plants: tr|I1LZS5|I1LZS5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0277400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:64741278..64744374) extracted from Lotus japonicus Gifu genome v1.2.

GTGAATTTTCCTTCAAAAGCTGGGAGGAAACTCTTGCAGAAGGACTCAAGCAAAGAATCCACATCACAAGGAGATTCTAA GGCTCTACCAACCAACAAAGTTGGTATTTTTGCAGGTGGAGCTTTGTTGGCATGTTGTGCTGTTCTTTGTCCTTGTTTCT ATGGGAAGAAACGGAAAGCTACCGCTCATGCTGTTCTGGCGAAGGACCCAATTTCAAGTGAGTTGATGTTTATATGCTTT TGCTTTTACCACCTTTTCTTGGACTTTGTCTGGATAACATTCAAGTCAGATAAATACATTCATGTTATGAATTTCAGTTT TCATTCTCATATATCCCACACTTGGGAGCCTTGGAGTCAATTCTCATTGACCAGAATCACTTTTAGGTGGTTAAATAGAT GTTCAACAACCGATTTAGAGAATTGACTTTAGTCTAGAGAGGATAGCTTTTGCGGTGGACATAATCAATTGTGAGATTTC ATAACTTGATTTTACATTACCCTACAAAAATCATTGTCCCCATAAACGTATCAAACATAACTCACTTCAATTTCAACTCA CTTTTACCATAATTAATTTTACCAAAATTAATTCTGACGACGTTCAACATGTTTGTAAAACACTGCTGAAAGCACATATA TACTGATAGTCTCATCAAATGGAAGCAACAAATAGTTGCTTCCAGATTGTCATACACGATTCTAGTGGGCATCCTAGGCA AAAGCAAACATACAGTTGATCCAAACACAAATAATTTCTTTCCTTTTCTTTTTTATGAAATATGTGCTTCCCATTACACT TCAATCAGAAGTTATAATGAACAATTTTGCTCTTGTAGTGGATTCAGCTACCTCCTTTGACGCCTCCGTTTCTGCCTCCG TTTCGGGCAAGATCCCAGCGAGTCCACTTCGGGTGCCATCAAGTCCATCAAGATTTTCAATGTCTCCAAAGCTCAGTAGA CTTCATACATTAAATCTCAACCTGAGTCAGGTTGTAAGAGCTACCCGTAATTTCTCAGAAACATTACAAATAGGACAAGG AGGTTTTGGAACTGTCTACAAGGCTAATTTAGAAGATGGCCTGGTCGTGGCTGTAAAGCGTGCGAAAAGGGTAAGCAGTA TATATAGTTTAAAAATCTGCAGCTAACTCTAGAGTGCTAAAGGCTTTGATTCCGTTTTAGTTGAAAAATTGCGTATCAAT ATCATATTATGATGAACTCTTTGGACTATTCTGGTCCTCCTTGTTGATAGCATGACTACATTGTATAGGAGCATTTTGAG AGCTTGAGAACAGAGTTCAGCAGTGAAGTTGAACTTCTGGCCAAAATTGATCATCGAAACTTGGTGAAGCTACTAGGTTT TATTGACAAAGGAAATGAACGCATTCTTATAACAGAGTATGTACCTAACGGTACTCTTCGAGAACACTTGGATGGTAAGC CTATGCACTGTTCTTTAACCATGTCTGTATTTAAATATGGAAACCAATGTTGAATAATATGATGACTCGCAGGCCTGCGT GGGAAAATCCTGGACTTCAATCAGCGCCTCGAAATTGCAATTGATGTTGCTCATGGATTGACCTACTTGCACCTGTATGC AGGTCAGTGATTCCTCTATTGTGCAAGTTCTCTTCACCTTCTATGTTATCTTTGCTTGCCATATAAGATTATTCTACTTT ACATTTCAGATAATTAGAGTATAAATAGATGCTGTAAAGTCACTTGTTTTAAGAAAGCAACTTTAAATAAAGTTGTATCT TTTTCTTTTGAAACACAGCTTATTGACAGGACGTTATGTTCAAGCAGTGACCATTTGTACCTTCCTAGCATATTCTTACT TTTCCAGTTTTTCTGAAACAACCTTCAATGCATGCTGAAAATGTCCATATATTCCTGATTGAAAGATATAATCATTTGAT AGTTAATACTTGATCCAGGGATATTTTATTTACTTAGGCAATGTGCTTTTTAGGTTTTAAGTTTTTGACTTACTTTAGTA ACATGCAGTATAACTTCCCTATAGTCTAATAATATCTTTGGACCTACCAATTGATGCCTAACCTTTTCTTATCTTAGAAC AGAAAAGCAAATTATCCACCGAGATGTGAAATCATCCAACATTCTTCTCACAGAAAGCATGCGAGCTAAAGTTGCAGACT TTGGATTTGCAAGGCTTGGTCCAGTGAACGGTGACCAAACACATATTTCTACCAAAGTGAAGGGAACAGTTGGTTATTTG GACCCTGAGTATATGAAAACATACCAACTCACTCCCAAAAGTGATGTTTACTCATTTGGAATTTTGCTTTTAGAGATACT GACAGGCCGCCGTCCTGTGGAGTTGAAGAAAGCTGCTGATGAGCGGGTTACACTAAGATGGGTAAGCTCATACTTTGTTC ATTTTAAGATGAAGATTTCGTTTTGACATTAGCTTTTGCTAGTGCTAATAGTCCATTTAAAGTTTAGCATACTTCGATAA GATGATATACCATTTAAGGCATTTGCATTCATCCATGTGATTCTAACAATGATCTTGTTAGGGACCTCTTAAGTAATAAG TACTTTTGTTAGTCTTATAATTCGGACTGGGCCTAACTGTACCTCAAAAGCTAGCTCAAATGTGAGGATTGTCCAGCCAT TTATAAGTACTTCATTAGTCATATCTTTAAACAATTTGGGACTTAACAGTTAAGGGACCTCTCTAATTGAACCATGTTTC ATCTGTTCTCGATGGGAGTAATTTGATGCAAGCATGTGGTTCCAATCTTCTTGCTACTTCACCAAATGATTTATAGTTGC ACTTGCATACTAATTATTTCAGCACTAGATTAAAAGCTTGGTTGTCTCTCTTCATTTTTAAGCACTCAAGTTCTGATCTT AATGCAGGCCTTCAGGAAGTATAATGAAGGAAGTGTGGTGGAACTGATGGATCCTTTAATGGAAGAAGCTGTGAACGCAG ATGTTCTCATGAAGATGCTTGATTTGTCATTTCAATGTGCAGCACCCATTCGAACAGATCGACCTAACATGAAATCAGTG GGTGAGCAATTGTGGGCAATAAGGGCAGATTATCTCAAGAGTGCAAGGAGAGAATGA
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0277400.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGGAAGAAACGGAAAGCTACCGCTCATGCTGTTCTGGCGAAGGACCCAATTTCAAGTGACTACCTCCTTTGACGCCTC CGTTTCTGCCTCCGTTTCGGGCAAGATCCCAGCGAGTCCACTTCGGGTGCCATCAAGTCCATCAAGATTTTCAATGTCTC CAAAGCTCAGTAGACTTCATACATTAAATCTCAACCTGAGTCAGGTTGTAAGAGCTACCCGTAATTTCTCAGAAACATTA CAAATAGGACAAGGAGGTTTTGGAACTGTCTACAAGGCTAATTTAGAAGATGGCCTGGTCGTGGCTGTAAAGCGTGCGAA AAGGGAGCATTTTGAGAGCTTGAGAACAGAGTTCAGCAGTGAAGTTGAACTTCTGGCCAAAATTGATCATCGAAACTTGG TGAAGCTACTAGGTTTTATTGACAAAGGAAATGAACGCATTCTTATAACAGAGTATGTACCTAACGGTACTCTTCGAGAA CACTTGGATGGCCTGCGTGGGAAAATCCTGGACTTCAATCAGCGCCTCGAAATTGCAATTGATGTTGCTCATGGATTGAC CTACTTGCACCTGTATGCAGAAAAGCAAATTATCCACCGAGATGTGAAATCATCCAACATTCTTCTCACAGAAAGCATGC GAGCTAAAGTTGCAGACTTTGGATTTGCAAGGCTTGGTCCAGTGAACGGTGACCAAACACATATTTCTACCAAAGTGAAG GGAACAGTTGGTTATTTGGACCCTGAGTATATGAAAACATACCAACTCACTCCCAAAAGTGATGTTTACTCATTTGGAAT TTTGCTTTTAGAGATACTGACAGGCCGCCGTCCTGTGGAGTTGAAGAAAGCTGCTGATGAGCGGGTTACACTAAGATGGG CCTTCAGGAAGTATAATGAAGGAAGTGTGGTGGAACTGATGGATCCTTTAATGGAAGAAGCTGTGAACGCAGATGTTCTC ATGAAGATGCTTGATTTGTCATTTCAATGTGCAGCACCCATTCGAACAGATCGACCTAACATGAAATCAGTGGGTGAGCA ATTGTGGGCAATAAGGGCAGATTATCTCAAGAGTGCAAGGAGAGAATGA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0277400.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MGRNGKLPLMLFWRRTQFQVTTSFDASVSASVSGKIPASPLRVPSSPSRFSMSPKLSRLHTLNLNLSQVVRATRNFSETL QIGQGGFGTVYKANLEDGLVVAVKRAKREHFESLRTEFSSEVELLAKIDHRNLVKLLGFIDKGNERILITEYVPNGTLRE HLDGLRGKILDFNQRLEIAIDVAHGLTYLHLYAEKQIIHRDVKSSNILLTESMRAKVADFGFARLGPVNGDQTHISTKVK GTVGYLDPEYMKTYQLTPKSDVYSFGILLLEILTGRRPVELKKAADERVTLRWAFRKYNEGSVVELMDPLMEEAVNADVL MKMLDLSFQCAAPIRTDRPNMKSVGEQLWAIRADYLKSARRE
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR27003
26 361 336 1.8E-181 –
PANTHER
PTHR27003:SF43
26 361 336 1.8E-181 –
Gene3D
G3DSA:3.30.200.20
45 152 108 2.9E-29 –
SUPERFAMILY
SSF56112
59 351 293 4.05E-76
IPR011009
SMART
SM00220
76 350 275 1.1E-35
IPR000719
ProSiteProfiles
PS50011
76 350 275 38.548
IPR000719
Pfam
PF07714
81 348 268 2.6E-50
IPR001245
CDD
cd14066
82 348 267 2.89303E-100 –
ProSitePatterns
PS00107
82 104 23 -
IPR017441
Gene3D
G3DSA:1.10.510.10
153 361 209 4.2E-56 –
ProSitePatterns
PS00108
197 209 13 -
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0277400.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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