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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0278900 |
| Transcript ID | LotjaGi4g1v0278900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Translocase of chloroplast 90, chloroplastic; TAIR: AT5G20300.1 Avirulence induced gene (AIG1) family protein; Swiss-Prot: sp|Q6S5G3|TOC90_ARATH Translocase of chloroplast 90, chloroplastic; TrEMBL-Plants: tr|I1LZT2|I1LZT2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0278900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:64916884..64921585) extracted from Lotus japonicus Gifu genome v1.2.
GGGAGTGGCACCAATAACATAACCTTTAAGGTCACAAGCAACAAGAAGAGATCAAAATTGTTTGCACCAGACATGGTAGT TGATGTCATTGAGTTTGATGAGAAGGTTAGTAGTTATGTTAACTCAACAAGATCTTTCTAAACTTGAGGAAGAAGAAGTA GGAGTTACAATATTTGAAGCACATCAAGTTTTTATGTCTATTTTTATGCAGTGATATGTGTATAATTTTTTTAATAAATT TAACCAATAAATTGTTATCCTAAGTTTTATCTAAAGAACTTAAGAAAAGAAAAAAACAAAGGAAGAGAAAGAGTGAGTTA TGACCGTGTGAGTTGTTGTCTCTATCTGCCTTATCCCCCTCCGTAATCTCCATCTCCCAATTTTCTTCTTCTTCATCCTC CTCGTTCTGCTTCACCTTCAATTCCTTCGGGATCCTCTTTCTTCAAATTAGGGTTTTTGTCAACGCTTCCTTCATCGGGA TTCGAGTATCCCAAAGCTTGTTTCACTGCACCTGTCTCTCGCTTTTCGTCCCTCCTCGTGCTTCACGCCCAGAATTCAAA CTCAGTGTCTCCAACATCTCATTTCCAAGGTGAATTTCAATAATTGCTACTACTACTACTACTAGGTGATTTTGTCAAAA CCCAGGAATAAAAAAGCATTTTCATTCATGGGTTTTGACAACTTAATCTTAATGATTGAGTATTTTCTAAAATGGAATTC AATTAGGGATTCCATGAGAAGTGATAATGTGATTTGTTTCTAGTTTGTTCTAGGTAGAAAAAACGTTGTAATTCCTTGTT TTAATGTTATATGGAGTGATGGAAGCTTCCTTTCAAATGTTGCAGTATGATGAAAGGTGTGAGGGACTGGGTTTTTTCTC AGATACTGTCCAATTCATTGGTCTCAACAACAACCCCGTCGACATCGGGCAGCGGTAGTTTCTATGATGAAGAGCGCCGG GGAGAAGATATCAATGACCAAGGTACAACCCTGATTCTACTGTTTCTGTGAAATTACTGAAAATGCACTTACATAGCTTC TCATGAGAATGCACCAAGGAAAAAAATGGTGGGTGGTGAAATAGGATTATAGTGATCTCGTTGGCTCTACTGTTTCGTGC ATGTTAAGCTCAGCGGATAAATAGTTGTTTACTTAGTTCCATAATGCAACATATATTTTTTCATGTGCTATCATTTGAGA CTACTCTTTGGTAATGGTATGGCGATGCTTATATTCAGTCCTTGGAGGGGATATATAAGATGGTGTTTATTTTCTTCTTT TGTGGCTGCTTAAAATGTAAGGCAGTTAAGTGGCATTTACATGTTTAGGACATATATGTACTACCGTGCCAGATGTCTGT GGGGGGATATAAATCCAAGATGTTATCTAGGCAAATGACCCATCTATTGTTGAATAAATACCTTTTGGGTGTAAAATAAA ATTTTGTAGTCTTACCTCATTATAAAATTAAATTCCTAATAACCATTATATTAATGAACTTAAAAATACATATTAAGGTG GCTGGAGTTGCTTGACTCTCCTGGTATATGCCCTCTTTCTTCAGGAATTGCTACTGTCATATATGTACTGCATTTTGCTT ATCGTTAGTTCTTCGATGCTGGGTGAAATAGAAGGATTCTCTTTCATGTCTAGTCCAGTGGACAGGTATATTTGAAGATT CTGTTTGCCACACTTCTAGGAATGTGGAATTCCCACAAAGTAAAAGTGGTGTTGTGATGTTGATTTAAGGGTTTATTCCT TAACTTATTTAACTAAGGTTGGATAAGGCAAGCTATTCTAATTTTCGAGTGTACGAAACAATCCTGAATACCTATTTGCA TTAATGCTGATTTTCGTGACCGCACTGTCTATCATCAGTACAATTTAGATAGAACTGATACATTTGTTCTTTCTTTAGGT ACAGTTCACTCAGCTAGTGCAGTATCATCACCAGTTCCTTCAGACACATCAAGCTCTTTTGGTAATCAGATTATTCCGCA TAATTCCACCTTGCAGCAAATTTCAGATGCAGAAATTTGTCAATCTCAACATAATGCCAATGAAAGACGGAATGACACTT TGGCAAAGGTTGAGGAACTCCAAGTTAAATTCTTCCGTCTCCTCCAGCGTCTTGGTCCGTCACAAGAAAATCTCTTGGTT ACACAGGTTCTTTCTCGGATGCACCTGGCAACCTTGATTCGTGCTGAGGAACCAGATCTAAAAAGAGTTAATGTTAGTAG CAGGAGAGCTCGAGCAATAGCAAGCCAACAGGAGGCAATTGGTATTCCCCAATTAGATTTCTCTTGCAGAATACTTGTCC TCGGTAAAACAGGAGTTGGTAAAAGTGCTACCATAAATTCAATATTTGGTCAAGCAAAAGCCATCACTGATGCATTTCAA CCAGCTACTAGTTTCATCCAAGAAGTTGTGGGAAATGTCAATGGGCTTAACTTAACATTTATTGATACCCCTGGTTTCCT CCCTTCCTCCACCAATAATGTGAAGAGAAATAAGAGGATCATGCTCTCTGTGAAGAGATTCATCAGAAAGTCCCCCCCGG ACATTGTTTTGTACTTTGAACGGCTTGATCTTACTAATGCTGGTTATAGTGATTTCCCACTTCTGAAGCTCATTACCGAA GTATTTGGCACAGCAATCTGGTTCAACACTATCCTAGTGATGACTCATTCTTCCTTACCTATTCCAGAAGGACCTGATGG GTATACTGTTAATTACGATTCATATATTTCTCAACGTACCAACATAATACAGCAGTATATACATCAGGCAGTGTTAGATT CAAGGCTTGAAAACCCCGTACTATTGGTTGAGAACCATTCTCAGTGCCCGAAAAATATTATGGGGGAGAAAATTCTTCCA AATGGACAAGTTTGGAGATCTAGGCTCTTGCTATTTTGCATCTGTACAAAAATTCTGGGTGATGTCAATTCCCTCCTTAA GTTTCAGAACAGTGTAGAACTGGGACCAGCAAATAGTTCCCGAATTCCTTCTCTGCCCCATCTCCTTTCGTCTCTTTTAC GTCATCGTCCTGTACCCAACCAGAATGGAATTGATGATGAAATTGAAGAAATTTTACTCTCAGATAAGGAAGAAGAAGAT GAATATGATCAACTTCCACCCATACGGATCTTGACAAAATTCCAGTTTGAAAAGTTGTCCAAGGCACAGAAAGAAGATTA TCTGGATGAATTGGATTACAGGGAGACTCTTTTCTTAAAGAAACAATTGAAAGAAGACTATCGTGAGCGTAAACAGAAGT TACTTTTAAAAGAGAAAACACTTTTGGATAGTGATCCTTCTGATGATGATCCTCCGGAACCTGTTCTGTTACCAGATATG GCTGTTCCTCCAAGTTTTGACTCAGATTGTCCTATACACAGATACCGTTGCCTTGTTACTAATGACCAATGGCTTGTAAG ACCAGTTCTTGACCCTCAAGGTTGGGATCATGATGTGGGCTTCGATGGTATAAACTTGGAGACAGCTACAGAAATAAAGA AGAATGTACATGCATCTGTTGTGGGACAGATGAGCAAGAACAAGCAGGATTTCAGTATTCAATCTGAGTGTGCTGCAGCT TATGTTGATCCGTGGGGCCCTACCTATTCTGTCGGTGTTGATGTTCAATCTTATGCTAAAGATCTGATATATACTATTCA TAGCAACACAAAGTTGAGAAACATAAAGCACAATACTGCTGAGTGTGGTCTTTCTGTGACATCTTTTGCAAAGAAGTTCT ATCTGGGTGCAAAACTTGAGGATACTGTGTTAGTTGGGAAAAGATTAAAATTTGTCATGAATGCTGGTCGCATGGAGGGT CCTGGACAAGTGGCGTATGGCGGGAGTTTTGAAGCTATTGTACGAGGGGAAGATTATCCTGTAAGAAGTGACAATTTAAG TCTGACAATGACAATCCTCTCCTTCAACAAAGAGATGGTGTTGAGTGGAAGTTTACAATCTGAGTTCAGGTTAAGTCGAA GCTTGAGAGCATCTGTTGGTGCGAATCTAAATAGTCGCAAAATGGGGCAAATATCTGTAAAGATGAGTAGCTCTGAGCAT TTACAAATTGCCCTGGTTGGTGTTTTCTCAATTTTCAAAGTGTTATCACGTAGGAAGGCAACAAGTAAAAACGTGATGAA GGAAGTAATGGACAGAGATTAGGTTATGTTTGTTGACTTTGTTCTGTCACTGATCATTTTTGTTCAAGGAAGAGGTGAAA GTGGGGAAGCATTCTACATGCTAAACATAGGTATGGACCATTTTCCCTGCGAAGGGAGGATAGATGATCATTTTTGAAGA GTTAGATTAGTTTCTTTTTGTGATAATTCGGATGCCTGTTTTTGAAGTCTCATTCAGGTAAACGGATGGCATATTGAACC TATTGTCTGTACATAGTTGTTCAATACTTCAATTATCAGTATCTGGATTTCACCAACTATTGGTATTCATTTAGTAAAAT GTAGTCATAACTGTACAGTAAAGCACAGAAACCATCTGGCTTTTTTGTTATGTGATTTGTTCAAATTAGTTGGAATATGA ATGCTTTAACCGGAGTTATTGAAATGTGGAAAACGTTAATGAAGCTCAGGATATATTGAGAATGATAGTGTCACCTTCAA GAGTTCAAAATCTTTCAACCTTCATTAGAGGTTGGATGCATTGGAAACCATCTTGAACACGA
CDS sequence (LotjaGi4g1v0278900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGAAAGGTGTGAGGGACTGGGTTTTTTCTCAGATACTGTCCAATTCATTGGTCTCAACAACAACCCCGTCGACATC GGGCAGCGGTAGTTTCTATGATGAAGAGCGCCGGGGAGAAGATATCAATGACCAAGGTACAGTTCACTCAGCTAGTGCAG TATCATCACCAGTTCCTTCAGACACATCAAGCTCTTTTGGTAATCAGATTATTCCGCATAATTCCACCTTGCAGCAAATT TCAGATGCAGAAATTTGTCAATCTCAACATAATGCCAATGAAAGACGGAATGACACTTTGGCAAAGGTTGAGGAACTCCA AGTTAAATTCTTCCGTCTCCTCCAGCGTCTTGGTCCGTCACAAGAAAATCTCTTGGTTACACAGGTTCTTTCTCGGATGC ACCTGGCAACCTTGATTCGTGCTGAGGAACCAGATCTAAAAAGAGTTAATGTTAGTAGCAGGAGAGCTCGAGCAATAGCA AGCCAACAGGAGGCAATTGGTATTCCCCAATTAGATTTCTCTTGCAGAATACTTGTCCTCGGTAAAACAGGAGTTGGTAA AAGTGCTACCATAAATTCAATATTTGGTCAAGCAAAAGCCATCACTGATGCATTTCAACCAGCTACTAGTTTCATCCAAG AAGTTGTGGGAAATGTCAATGGGCTTAACTTAACATTTATTGATACCCCTGGTTTCCTCCCTTCCTCCACCAATAATGTG AAGAGAAATAAGAGGATCATGCTCTCTGTGAAGAGATTCATCAGAAAGTCCCCCCCGGACATTGTTTTGTACTTTGAACG GCTTGATCTTACTAATGCTGGTTATAGTGATTTCCCACTTCTGAAGCTCATTACCGAAGTATTTGGCACAGCAATCTGGT TCAACACTATCCTAGTGATGACTCATTCTTCCTTACCTATTCCAGAAGGACCTGATGGGTATACTGTTAATTACGATTCA TATATTTCTCAACGTACCAACATAATACAGCAGTATATACATCAGGCAGTGTTAGATTCAAGGCTTGAAAACCCCGTACT ATTGGTTGAGAACCATTCTCAGTGCCCGAAAAATATTATGGGGGAGAAAATTCTTCCAAATGGACAAGTTTGGAGATCTA GGCTCTTGCTATTTTGCATCTGTACAAAAATTCTGGGTGATGTCAATTCCCTCCTTAAGTTTCAGAACAGTGTAGAACTG GGACCAGCAAATAGTTCCCGAATTCCTTCTCTGCCCCATCTCCTTTCGTCTCTTTTACGTCATCGTCCTGTACCCAACCA GAATGGAATTGATGATGAAATTGAAGAAATTTTACTCTCAGATAAGGAAGAAGAAGATGAATATGATCAACTTCCACCCA TACGGATCTTGACAAAATTCCAGTTTGAAAAGTTGTCCAAGGCACAGAAAGAAGATTATCTGGATGAATTGGATTACAGG GAGACTCTTTTCTTAAAGAAACAATTGAAAGAAGACTATCGTGAGCGTAAACAGAAGTTACTTTTAAAAGAGAAAACACT TTTGGATAGTGATCCTTCTGATGATGATCCTCCGGAACCTGTTCTGTTACCAGATATGGCTGTTCCTCCAAGTTTTGACT CAGATTGTCCTATACACAGATACCGTTGCCTTGTTACTAATGACCAATGGCTTGTAAGACCAGTTCTTGACCCTCAAGGT TGGGATCATGATGTGGGCTTCGATGGTATAAACTTGGAGACAGCTACAGAAATAAAGAAGAATGTACATGCATCTGTTGT GGGACAGATGAGCAAGAACAAGCAGGATTTCAGTATTCAATCTGAGTGTGCTGCAGCTTATGTTGATCCGTGGGGCCCTA CCTATTCTGTCGGTGTTGATGTTCAATCTTATGCTAAAGATCTGATATATACTATTCATAGCAACACAAAGTTGAGAAAC ATAAAGCACAATACTGCTGAGTGTGGTCTTTCTGTGACATCTTTTGCAAAGAAGTTCTATCTGGGTGCAAAACTTGAGGA TACTGTGTTAGTTGGGAAAAGATTAAAATTTGTCATGAATGCTGGTCGCATGGAGGGTCCTGGACAAGTGGCGTATGGCG GGAGTTTTGAAGCTATTGTACGAGGGGAAGATTATCCTGTAAGAAGTGACAATTTAAGTCTGACAATGACAATCCTCTCC TTCAACAAAGAGATGGTGTTGAGTGGAAGTTTACAATCTGAGTTCAGGTTAAGTCGAAGCTTGAGAGCATCTGTTGGTGC GAATCTAAATAGTCGCAAAATGGGGCAAATATCTGTAAAGATGAGTAGCTCTGAGCATTTACAAATTGCCCTGGTTGGTG TTTTCTCAATTTTCAAAGTGTTATCACGTAGGAAGGCAACAAGTAAAAACGTGATGAAGGAAGTAATGGACAGAGATTAG
Protein sequence (LotjaGi4g1v0278900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMKGVRDWVFSQILSNSLVSTTTPSTSGSGSFYDEERRGEDINDQGTVHSASAVSSPVPSDTSSSFGNQIIPHNSTLQQI SDAEICQSQHNANERRNDTLAKVEELQVKFFRLLQRLGPSQENLLVTQVLSRMHLATLIRAEEPDLKRVNVSSRRARAIA SQQEAIGIPQLDFSCRILVLGKTGVGKSATINSIFGQAKAITDAFQPATSFIQEVVGNVNGLNLTFIDTPGFLPSSTNNV KRNKRIMLSVKRFIRKSPPDIVLYFERLDLTNAGYSDFPLLKLITEVFGTAIWFNTILVMTHSSLPIPEGPDGYTVNYDS YISQRTNIIQQYIHQAVLDSRLENPVLLVENHSQCPKNIMGEKILPNGQVWRSRLLLFCICTKILGDVNSLLKFQNSVEL GPANSSRIPSLPHLLSSLLRHRPVPNQNGIDDEIEEILLSDKEEEDEYDQLPPIRILTKFQFEKLSKAQKEDYLDELDYR ETLFLKKQLKEDYRERKQKLLLKEKTLLDSDPSDDDPPEPVLLPDMAVPPSFDSDCPIHRYRCLVTNDQWLVRPVLDPQG WDHDVGFDGINLETATEIKKNVHASVVGQMSKNKQDFSIQSECAAAYVDPWGPTYSVGVDVQSYAKDLIYTIHSNTKLRN IKHNTAECGLSVTSFAKKFYLGAKLEDTVLVGKRLKFVMNAGRMEGPGQVAYGGSFEAIVRGEDYPVRSDNLSLTMTILS FNKEMVLSGSLQSEFRLSRSLRASVGANLNSRKMGQISVKMSSSEHLQIALVGVFSIFKVLSRRKATSKNVMKEVMDRD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 765 | 765 | - | – | |
| PANTHER | 1 | 788 | 788 | 0.0 | – | |
| PANTHER | 1 | 788 | 788 | 0.0 | – | |
| MobiDBLite | 46 | 70 | 25 | - | – | |
| TIGRFAM | 76 | 782 | 707 | 4.9E-214 | ||
| Gene3D | 149 | 399 | 251 | 1.8E-52 | – | |
| SUPERFAMILY | 170 | 361 | 192 | 2.58E-20 | ||
| ProSiteProfiles | 172 | 402 | 231 | 45.155 | ||
| Pfam | 175 | 326 | 152 | 2.0E-22 | ||
| Pfam | 519 | 784 | 266 | 1.2E-121 | ||
| Phobius | 766 | 782 | 17 | - | – | |
| Phobius | 783 | 799 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. | ||
| Molecular function | Hydrolase activity, acting on acid anhydrides | Catalysis of the hydrolysis of any acid anhydride. |
Expression pattern of LotjaGi4g1v0278900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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