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LotjaGi4g1v0284000.4

Overview

Field Value
Gene ID LotjaGi4g1v0284000
Transcript ID LotjaGi4g1v0284000.4
Related isoforms 5
Lotus japonicus genome version Gifu v1.2
Description Plasma membrane ATPase; TAIR: AT3G42640.1 H -ATPase 8; Swiss-Prot: sp|Q9M2A0|PMA8_ARATH ATPase 8, plasma membrane-type; TrEMBL-Plants: tr|I1LZM3|I1LZM3_SOYBN Plasma membrane ATPase; Found in the gene: LotjaGi4g1v0284000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:65620202..65625580) extracted from Lotus japonicus Gifu genome v1.2.

CAAGTTGTTACATTGCATGTATATTGCAGGAAAGCGTTCCACTTGAGGAGGTCTTTCAGACGCTAAAATGTACCAGAGAG GGTCTAACCTCAGCTGAGGGAGACAAGAGACTGCAAGTCTTTGGTCTCAATAAGCTAGAGGAGAAAAAGGAGAGCAAGTT CCTTAAATTCTTGGGTTTTATGTGGAATCCTTTATCATGGGTCATGGAGGCTGCTGCTATCATGGCCATTGTATTGGCCA ATGGAGGGGTAATTATCAATCTCTCATCTCTTTATGTATAAATATATCACAATGTTCTTTTCTAACAAAGAAGTTGTAAA TAAATTACCAGGGAAAGCCACCAGATTGGCAAGATTTTGTTGGTATTGTTGTGTTGCTCATCATCAACTCCACCATTAGT TTCATTGAAGAAAACAATGCAGGCAATGCTGCAGCAGCTTTAATGGCTGGTCTTGCACCCAAAACCAAGGTAATGTAACA TCTTTCTTCATTCACTTTCATGCACTCACAGACTCACTTACACAATTTCAATATAACTTTCACATTACCACAAGCACATA GATCAATTGGCGTGAAGTTTTTCTAGCTTAAGCAACGGTCTTCGATTTGAGTCCCTGTGAATGCAATGATTTAAATACTT AATATAGGAAGAGTTTTTCCTTCCATAGTGATCTTACCCGGCTCGAACGAGATTGTCTCAGTGAATGATACCTTTGGTTT AAACTCAAAAACATTATAACTTTCACATTCACTAGCTAACAAGGAGTCATTTTGCAGGTGTTGAGGGATGGAAAGTGGAG TGAGCAGGAGGCTGCAATATTGGTGCCAGGAGATATTGTCAGCATCAAATTGGGAGATATCGTCCCAGCTGATGCTCGTC TCTTGGAAGGAGATCCCCTCAAGATTGACCAATCTGCCCTCACCGGTGAGTCCCTACCTGTAACTAGGAACCCTGGTGAT GAGGTTTTCTCTGGTTCCACCTGCAAACAAGGTGAGATAGAGGCTGTTGTCATTGCCACTGGTGTGCACACCTTCTTTGG CAAGGCTGCACATCTTGTGGACAGCACCAACAATGTTGGTCATTTCCAAAAGGTACATCATTTTTTTACTCCCCTAAGCT CTATTCTATCGTAGCCGCCAGTTTAGGATTTTTGTCGCAGTTATTAAGAAACTGTATTAATGTTCTTGCTTTTATTAAAA TTATTACCTAACTATGTAACATATCCTTTATCTCTTTTATTAATTTTGACTCCTCAATGTTTCTATCACCATTAAGAATT ATTGAGAAAAGGGTATAAAGTAACAAAGGAGTAAGCTTTTGTAAGTGATTCTTAATTGGTTTCATAGTTTGATAACTTTG AAAAAATCATTTCTTGATTGGCTTCTATTAGGTTTTGACATCCATCGGAAACTTCTGTATCTGCTCAATTGCTTTGGGAA TGTTGATTGAGCTTGTTGTGATGTATCCCATTCAAAGGAGGGCATATAGAGAAGGTATTGACAATTTGTTGGTTCTTCTC ATTGGAGGTATCCCAATTGCCATGCCAACAGTGTTGTCTGTGACCATGGCTATTGGGTCTCACCGTTTGTCTGAGCAAGG AGCCATCACCAAGAGGATGACAGCCATTGAAGAGATGGCTGGGATGGATGTTCTCTGCAGTGACAAGACTGGAACTCTCA CCCTTAACAAGCTTACTGTGGACAAGAACTTGATTGAGGTTAATCACCAATCTTAAATATTAGTGATAACGAATGAATGC TTTGCATTAGTCGGTCTCATCTTGTGAACCTTTTAAGTACATACATTGCAGATTGCATGCATAGATATTTGAGAACTTGT TTGGATGCAGACTAAAGAACACTTATTGAAGCTTATCTGGTGTTTTTTTAGTAGATAACCTTCAATAAATGGCCTTTGAC CGTATCTAGACAGACTCTTTATATTTGGTATAACAACTTTGATATCTTGGCATGTTTGAAGTGATGTCCTTGCAACTAGC AACCATATATTTTTACATTTGCATATATGAAATTAAATTAGTTTTGTATCTACTTGAACAACTTACCAGGTCTCTTACCA CTATTAAATGTAGCTTAAACTTAAAAGATTGGTAGCATGGAAGAAGTTGCATTTGCTCCAAAATCTTCCTTCTTCCTAAT CAGGGTTGTTTGTGAGTGCAGGTGTTCCCCAGTGGTATGGATAAGGACACTCTTCTCTTGCATGCTGCCAGGGCTTCTAG AGTTGAAAACCAAGATGCCATTGATGCTTCAATAGTTGGGATGTTGGGCGACCCCAAGGAGGTACTAATATTTAAATTGA CATTCTTTCATGAACCACTTAGTCTTGAGTCAACATTAAGCATTCGAAGAAACTTTTTTAATTGGACTATGTTTTGACAT CTTAGGCAAGAGAAGGAATCACTGAGGTGCATTTCTTGCCCTTCAATCCTGTGGATAAGCGCACAGCAAATACCTACATT GATGGCGAAGGCAACTGGCACAGAAGCAGCAAGGGTGCTCCTGAGCAAGTAAGGATATGCTGATATGCATCAACATAATA ACATTTTGATCACTATGACTTAGCTATACTATGTAACAACTAACATGTATTACTTATGATATATGACTAACCATTTTATA TATCAGATTATTGAGCTTTGTGGCCTCAAAGGAGAAGCTTTAAAGAAGGCGCATAACATCATTGATCAGTTTGCTGAGAG GGGTTTGCGTTCATTGGCTGTTGCATACCAGGTGAATAAAGGGTCTAATATCATGCATTGTAATCTTTTGTCCTCAAACT GTGTCATATTCTTCCTTCCACTAATAAAGTTTTGACATGTCAATTAAAAACGACCATGAAAGTTTGTAACTGTGGTAAAA TTTCATGGTAAATTGTGAGACCATTTATAATATAGAGGCCATGAATTTACAATTGGAAAGAGAAAGGAGGAAATTAACTT GCAATTTTTTTGCACTTTCGTGCAGACTGTTTCAGAAAAGTCCAAGGAGAGTGCTGGAGAAACATGGGTGTTCGTAGGCC TTTTGCCACTCTTTGACCCTCCAAGGCATGACAGTGCAGAGACTATTCGTCGTGCTCTTGATCTTGGTGTCAATGTTAAG ATGATCACCGGTGACCAACTTGCTATTGGGAAAGAAACTGGTCGCAGGCTTGGAATGGGAACCAACATGTATCCTTCATC CTCCCTTCTTGGTGAGAACAAGGATGCTGCCATTGCATCAATCCCAATTGATGAACTCATTGAGAAGGCTGATGGATTCG CTGGAGTATTCCCTGGTAATGAGATGAATCTATAATATGTTTGGATCATCTTTTTTTCCCCAAAATCAATTCTAGCACAC AAAAGCTGCTCATAAAGTTTTATCCCCATAATTGATTTTGTCTTTAGAATCAATTGTAGGAGAATTTCTAAACACACACT AGTTCATGTTAAAGTAACTAAGCCCCATAGGAAAACAAAACCTGAATTTTCACATGTTCCTTGCAGAGCACAAATATGAG ATTGTCAAGAGGTTGCAGGAGATGAAACACATTTGTGGAATGACCGGAGATGGTGTGAATGATGCCCCAGCACTGAAGAA AGCAGATATTGGAATTGCAGTGGCTGATGCTACTGATGCTGCCAGAAGTGCCTCAGACATTGTTCTGACCGAGCCGGGAC TAAGTGTGATTGTGAGTGCTGTATTAACCAGCAGGGCCATCTTTCAGAGGATGAAGAACTACACAATCTATGCTGTTTCC ATCACAATCCGTATTGTGTTTGGATTCATGCTGGTAGCTCTAATATGGAAATTTGACTTCTCACCTTTCATGGTCCTGAT CATTGCTATCTTGAATGATGGAACCATCATGACCATTTCCAAGGATAGGGTGAAGCCATCCCCTTTGCCTGATTCATGGA AACTCAAAGAAATATTTGCCACTGGAGTTGTTCTTGGAGCTTACATGGCCCTCATTACTGTGTTGTTCTTCTATTTAGTT CATGACACCGATTTCTTCACTGTAAGTAATCCTAACCCAACACTTTAGCTCCATACCACTCATCATAAAAGGAAAGTGAT TTATAGACATCCGTATAGTACAAAAACTCAACACACATCCAAAGTGAGAAAGTAAGAGAATGTGATAAGAAGTGAGAGAT ATAGAGAAAGTCAAGTATTGTTACTGATTATAGAATTATGACATGACATGTAACTATGTTCCTTGTTGTTCTTTCAGGAT GTTTTTGGTGTTAAGTCAATTGCAGAAAGTGAGGAAGAGCTTAACTCAGCTCTCTACCTTCAAGTGAGTATAATTAGTCA AGCACTCATCTTCGTGACCAGGTCAAGGGGATGGTCTTATGCTGAACGCCCTGGCGTGTTACTTATCACAGCCTTCTTTC TTGCACAACTGGTTAGTTTCTTTCTATTTTTGAAAACATGGTTCCATAAAGAGTCATCATCACTACAAACATATCTGGTT TTAATTTGATTACTTCTTAAATTAGGTGGCAACTATCATTGCTGTGTATGCACATTGGGACTTTGCTAGAATCCATGGAG TCGGTTGGGGTTGGGCAGGAGTAATCTGGATCTTCACCATTGTCACCTATATCCCTCTTGATATCATCAAGTTCCTGATC CGCTTGGGATTGTCAGGAAGGGCTTGGGACAACATGATAGATCACAAGGTCTAACAAACATTCTTAAATCACCAAAATAT CATTTTTTTTAGTCTTTTGCTATATGCTCAAATAAGTTTCTGTTGAACAAGTGGTGGTTGGTTTAAGTAGTACATACCCG ATTCCGTTTTAGTAAGATTTCGGTTCGAGTCATATGAATAAAAAAGCTCTCCCGCTGGAAGAGTTAGCTCCACCAGGATG TGAATGTTTATAACTCGAATCGAATTGTCTCACCTGTGGTGAATGCAATTTTGTTGTTGTTGTTGCTCACTACAATGCAT TATTTCGTGTCTATTGATGCAGACTGCTTTCACAACAAAGAGTGACTATGGAAAGGGAGAGAGGGAGGCTCAATGGGCTG TGGCTCAACGCACCTTGCATGGTCTCAAAGTTGAAGAAGCTCACTTGAACAACCACCACCATGAACATTCTGAAATCGCT GAGCAGGCTAAACGACGCGCTGAGGCCGAAAGGTTCAGCACCCCAAACTTAACTTCAAATGAATTGCATCAAATGATATG ATAGTTTTGGATTATTAAAATTTAGTCTGGCGAATTTTAATCTAATGTGGTGATATTTATTTTGATGGATGAACATTTTC AGGCTCAAAGAGCTCCACACACTCAAGGGACATGTTGAATCTGTGGTGAAATTGAAGGGTCTTGACGTTGATACCATCCA ACAACACTATACAGTCTAA 

CDS sequence (LotjaGi4g1v0284000.4) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTGGAATCCTTTATCATGGGTCATGGAGGCTGCTGCTATCATGGCCATTGTATTGGCCAATGGAGGGGGAAAGCCACC AGATTGGCAAGATTTTGTTGGTATTGTTGTGTTGCTCATCATCAACTCCACCATTAGTTTCATTGAAGAAAACAATGCAG GCAATGCTGCAGCAGCTTTAATGGCTGGTCTTGCACCCAAAACCAAGGTGTTGAGGGATGGAAAGTGGAGTGAGCAGGAG GCTGCAATATTGGTGCCAGGAGATATTGTCAGCATCAAATTGGGAGATATCGTCCCAGCTGATGCTCGTCTCTTGGAAGG AGATCCCCTCAAGATTGACCAATCTGCCCTCACCGGTGAGTCCCTACCTGTAACTAGGAACCCTGGTGATGAGGTTTTCT CTGGTTCCACCTGCAAACAAGGTGAGATAGAGGCTGTTGTCATTGCCACTGGTGTGCACACCTTCTTTGGCAAGGCTGCA CATCTTGTGGACAGCACCAACAATGTTGGTCATTTCCAAAAGGTTTTGACATCCATCGGAAACTTCTGTATCTGCTCAAT TGCTTTGGGAATGTTGATTGAGCTTGTTGTGATGTATCCCATTCAAAGGAGGGCATATAGAGAAGGTATTGACAATTTGT TGGTTCTTCTCATTGGAGGTATCCCAATTGCCATGCCAACAGTGTTGTCTGTGACCATGGCTATTGGGTCTCACCGTTTG TCTGAGCAAGGAGCCATCACCAAGAGGATGACAGCCATTGAAGAGATGGCTGGGATGGATGTTCTCTGCAGTGACAAGAC TGGAACTCTCACCCTTAACAAGCTTACTGTGGACAAGAACTTGATTGAGGTGTTCCCCAGTGGTATGGATAAGGACACTC TTCTCTTGCATGCTGCCAGGGCTTCTAGAGTTGAAAACCAAGATGCCATTGATGCTTCAATAGTTGGGATGTTGGGCGAC CCCAAGGAGGCAAGAGAAGGAATCACTGAGGTGCATTTCTTGCCCTTCAATCCTGTGGATAAGCGCACAGCAAATACCTA CATTGATGGCGAAGGCAACTGGCACAGAAGCAGCAAGGGTGCTCCTGAGCAAATTATTGAGCTTTGTGGCCTCAAAGGAG AAGCTTTAAAGAAGGCGCATAACATCATTGATCAGTTTGCTGAGAGGGGTTTGCGTTCATTGGCTGTTGCATACCAGACT GTTTCAGAAAAGTCCAAGGAGAGTGCTGGAGAAACATGGGTGTTCGTAGGCCTTTTGCCACTCTTTGACCCTCCAAGGCA TGACAGTGCAGAGACTATTCGTCGTGCTCTTGATCTTGGTGTCAATGTTAAGATGATCACCGGTGACCAACTTGCTATTG GGAAAGAAACTGGTCGCAGGCTTGGAATGGGAACCAACATGTATCCTTCATCCTCCCTTCTTGGTGAGAACAAGGATGCT GCCATTGCATCAATCCCAATTGATGAACTCATTGAGAAGGCTGATGGATTCGCTGGAGTATTCCCTGAGCACAAATATGA GATTGTCAAGAGGTTGCAGGAGATGAAACACATTTGTGGAATGACCGGAGATGGTGTGAATGATGCCCCAGCACTGAAGA AAGCAGATATTGGAATTGCAGTGGCTGATGCTACTGATGCTGCCAGAAGTGCCTCAGACATTGTTCTGACCGAGCCGGGA CTAAGTGTGATTGTGAGTGCTGTATTAACCAGCAGGGCCATCTTTCAGAGGATGAAGAACTACACAATCTATGCTGTTTC CATCACAATCCGTATTGTGTTTGGATTCATGCTGGTAGCTCTAATATGGAAATTTGACTTCTCACCTTTCATGGTCCTGA TCATTGCTATCTTGAATGATGGAACCATCATGACCATTTCCAAGGATAGGGTGAAGCCATCCCCTTTGCCTGATTCATGG AAACTCAAAGAAATATTTGCCACTGGAGTTGTTCTTGGAGCTTACATGGCCCTCATTACTGTGTTGTTCTTCTATTTAGT TCATGACACCGATTTCTTCACTGATGTTTTTGGTGTTAAGTCAATTGCAGAAAGTGAGGAAGAGCTTAACTCAGCTCTCT ACCTTCAAGTGAGTATAATTAGTCAAGCACTCATCTTCGTGACCAGGTCAAGGGGATGGTCTTATGCTGAACGCCCTGGC GTGTTACTTATCACAGCCTTCTTTCTTGCACAACTGGTGGCAACTATCATTGCTGTGTATGCACATTGGGACTTTGCTAG AATCCATGGAGTCGGTTGGGGTTGGGCAGGAGTAATCTGGATCTTCACCATTGTCACCTATATCCCTCTTGATATCATCA AGTTCCTGATCCGCTTGGGATTGTCAGGAAGGGCTTGGGACAACATGATAGATCACAAGACTGCTTTCACAACAAAGAGT GACTATGGAAAGGGAGAGAGGGAGGCTCAATGGGCTGTGGCTCAACGCACCTTGCATGGTCTCAAAGTTGAAGAAGCTCA CTTGAACAACCACCACCATGAACATTCTGAAATCGCTGAGCAGGCTAAACGACGCGCTGAGGCCGAAAGGCTCAAAGAGC TCCACACACTCAAGGGACATGTTGAATCTGTGGTGAAATTGAAGGGTCTTGACGTTGATACCATCCAACAACACTATACA GTCTAA 

Protein sequence (LotjaGi4g1v0284000.4) extracted from Lotus japonicus Gifu v1.2 Proteins.

MWNPLSWVMEAAAIMAIVLANGGGKPPDWQDFVGIVVLLIINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQE AAILVPGDIVSIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTRNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAA HLVDSTNNVGHFQKVLTSIGNFCICSIALGMLIELVVMYPIQRRAYREGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL SEQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFPSGMDKDTLLLHAARASRVENQDAIDASIVGMLGD PKEAREGITEVHFLPFNPVDKRTANTYIDGEGNWHRSSKGAPEQIIELCGLKGEALKKAHNIIDQFAERGLRSLAVAYQT VSEKSKESAGETWVFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGENKDA AIASIPIDELIEKADGFAGVFPEHKYEIVKRLQEMKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG LSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLVALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSW KLKEIFATGVVLGAYMALITVLFFYLVHDTDFFTDVFGVKSIAESEEELNSALYLQVSIISQALIFVTRSRGWSYAERPG VLLITAFFLAQLVATIIAVYAHWDFARIHGVGWGWAGVIWIFTIVTYIPLDIIKFLIRLGLSGRAWDNMIDHKTAFTTKS DYGKGEREAQWAVAQRTLHGLKVEEAHLNNHHHEHSEIAEQAKRRAEAERLKELHTLKGHVESVVKLKGLDVDTIQQHYT V 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SignalP_EUK 1 20 20 -
PANTHER 1 856 856 0.0
PANTHER 1 856 856 0.0
Phobius 1 22 22 -
TIGRFAM 1 740 740 0.0
CDD 1 775 775 0.0
Gene3D 1 92 92 1.4E-30
SUPERFAMILY 1 779 779 9.68E-72
Phobius 1 10 10 -
Phobius 11 18 8 -
Phobius 19 22 4 -
Phobius 23 31 9 -
Phobius 32 48 17 -
TIGRFAM 35 282 248 6.5E-38
Phobius 49 178 130 -
Pfam 65 242 178 2.4E-48
SUPERFAMILY 66 163 98 1.14E-28
PRINTS 113 127 15 1.4E-42
Gene3D 146 285 140 7.2E-46
TMHMM 178 200 23 -
Phobius 179 201 23 -
Phobius 202 212 11 -
TMHMM 213 235 23 -
Phobius 213 235 23 -
Phobius 236 580 345 -
SFLD 245 574 330 0.0
SFLD 245 574 330 0.0
SUPERFAMILY 259 569 311 6.18E-38
Pfam 259 536 278 8.2E-16
PRINTS 263 277 15 1.4E-42
ProSitePatterns 265 271 7 -
Gene3D 286 429 144 5.0E-13
PRINTS 379 397 19 4.0E-59
PRINTS 417 428 12 1.4E-42
PRINTS 439 449 11 1.4E-42
PRINTS 494 510 17 4.0E-59
TIGRFAM 497 608 112 2.5E-28
Gene3D 497 779 283 1.2E-107
PRINTS 522 538 17 4.0E-59
PRINTS 522 541 20 1.4E-42
PRINTS 545 557 13 1.4E-42
PRINTS 553 578 26 4.0E-59
Phobius 581 603 23 -
TMHMM 581 603 23 -
Phobius 604 608 5 -
Phobius 609 626 18 -
TMHMM 610 627 18 -
Phobius 627 645 19 -
TMHMM 645 667 23 -
Phobius 646 667 22 -
Phobius 668 690 23 -
Phobius 691 708 18 -
PRINTS 694 715 22 4.0E-59
Phobius 709 719 11 -
TMHMM 719 741 23 -
Phobius 720 741 22 -
Phobius 742 752 11 -
TMHMM 751 770 20 -
Phobius 753 777 25 -
Phobius 778 881 104 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Nucleotide binding Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
Molecular function Proton-exporting ATPase activity, phosphorylative mechanism Enables the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) -> ADP + phosphate + H+(out). These transporters use a phosphorylative mechanism, which have a phosphorylated intermediate state during the ion transport cycle.
Cellular component Integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
Biological process Proton export across plasma membrane The directed movement of hydrogen ions (protons) from inside a cell, across the plasma membrane and into the extracellular region.

Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0284000.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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