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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0284000 |
| Transcript ID | LotjaGi4g1v0284000.6 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plasma membrane ATPase; TAIR: AT3G42640.1 H -ATPase 8; Swiss-Prot: sp|Q9M2A0|PMA8_ARATH ATPase 8, plasma membrane-type; TrEMBL-Plants: tr|I1LZM3|I1LZM3_SOYBN Plasma membrane ATPase; Found in the gene: LotjaGi4g1v0284000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:65620887..65625689) extracted from Lotus japonicus Gifu genome v1.2.
TTGACTTCAAAATCAATTGGAAGAGTTTCCATACAAGCATTTAGACATTGGCATTGTGTTCTTTTTTTTGTCAATTTGGT ATGTTTTTTGTCCTCCTTCCGTGAAATAACAAGTTGTTACATTGCATGTATATTGCAGGAAAGCGTTCCACTTGAGGAGG TCTTTCAGACGCTAAAATGTACCAGAGAGGGTCTAACCTCAGCTGAGGGAGACAAGAGACTGCAAGTCTTTGGTCTCAAT AAGCTAGAGGAGAAAAAGGAGAGCAAGTTCCTTAAATTCTTGGGTTTTATGTGGAATCCTTTATCATGGGTCATGGAGGC TGCTGCTATCATGGCCATTGTATTGGCCAATGGAGGGGTAATTATCAATCTCTCATCTCTTTATGTATAAATATATCACA ATGTTCTTTTCTAACAAAGAAGTTGTAAATAAATTACCAGGGAAAGCCACCAGATTGGCAAGATTTTGTTGGTATTGTTG TGTTGCTCATCATCAACTCCACCATTAGTTTCATTGAAGAAAACAATGCAGGCAATGCTGCAGCAGCTTTAATGGCTGGT CTTGCACCCAAAACCAAGGTAATGTAACATCTTTCTTCATTCACTTTCATGCACTCACAGACTCACTTACACAATTTCAA TATAACTTTCACATTACCACAAGCACATAGATCAATTGGCGTGAAGTTTTTCTAGCTTAAGCAACGGTCTTCGATTTGAG TCCCTGTGAATGCAATGATTTAAATACTTAATATAGGAAGAGTTTTTCCTTCCATAGTGATCTTACCCGGCTCGAACGAG ATTGTCTCAGTGAATGATACCTTTGGTTTAAACTCAAAAACATTATAACTTTCACATTCACTAGCTAACAAGGAGTCATT TTGCAGGTGTTGAGGGATGGAAAGTGGAGTGAGCAGGAGGCTGCAATATTGGTGCCAGGAGATATTGTCAGCATCAAATT GGGAGATATCGTCCCAGCTGATGCTCGTCTCTTGGAAGGAGATCCCCTCAAGATTGACCAATCTGCCCTCACCGGTGAGT CCCTACCTGTAACTAGGAACCCTGGTGATGAGGTTTTCTCTGGTTCCACCTGCAAACAAGGTGAGATAGAGGCTGTTGTC ATTGCCACTGGTGTGCACACCTTCTTTGGCAAGGCTGCACATCTTGTGGACAGCACCAACAATGTTGGTCATTTCCAAAA GGTACATCATTTTTTTACTCCCCTAAGCTCTATTCTATCGTAGCCGCCAGTTTAGGATTTTTGTCGCAGTTATTAAGAAA CTGTATTAATGTTCTTGCTTTTATTAAAATTATTACCTAACTATGTAACATATCCTTTATCTCTTTTATTAATTTTGACT CCTCAATGTTTCTATCACCATTAAGAATTATTGAGAAAAGGGTATAAAGTAACAAAGGAGTAAGCTTTTGTAAGTGATTC TTAATTGGTTTCATAGTTTGATAACTTTGAAAAAATCATTTCTTGATTGGCTTCTATTAGGTTTTGACATCCATCGGAAA CTTCTGTATCTGCTCAATTGCTTTGGGAATGTTGATTGAGCTTGTTGTGATGTATCCCATTCAAAGGAGGGCATATAGAG AAGGTATTGACAATTTGTTGGTTCTTCTCATTGGAGGTATCCCAATTGCCATGCCAACAGTGTTGTCTGTGACCATGGCT ATTGGGTCTCACCGTTTGTCTGAGCAAGGAGCCATCACCAAGAGGATGACAGCCATTGAAGAGATGGCTGGGATGGATGT TCTCTGCAGTGACAAGACTGGAACTCTCACCCTTAACAAGCTTACTGTGGACAAGAACTTGATTGAGGTTAATCACCAAT CTTAAATATTAGTGATAACGAATGAATGCTTTGCATTAGTCGGTCTCATCTTGTGAACCTTTTAAGTACATACATTGCAG ATTGCATGCATAGATATTTGAGAACTTGTTTGGATGCAGACTAAAGAACACTTATTGAAGCTTATCTGGTGTTTTTTTAG TAGATAACCTTCAATAAATGGCCTTTGACCGTATCTAGACAGACTCTTTATATTTGGTATAACAACTTTGATATCTTGGC ATGTTTGAAGTGATGTCCTTGCAACTAGCAACCATATATTTTTACATTTGCATATATGAAATTAAATTAGTTTTGTATCT ACTTGAACAACTTACCAGGTCTCTTACCACTATTAAATGTAGCTTAAACTTAAAAGATTGGTAGCATGGAAGAAGTTGCA TTTGCTCCAAAATCTTCCTTCTTCCTAATCAGGGTTGTTTGTGAGTGCAGGTGTTCCCCAGTGGTATGGATAAGGACACT CTTCTCTTGCATGCTGCCAGGGCTTCTAGAGTTGAAAACCAAGATGCCATTGATGCTTCAATAGTTGGGATGTTGGGCGA CCCCAAGGAGGTACTAATATTTAAATTGACATTCTTTCATGAACCACTTAGTCTTGAGTCAACATTAAGCATTCGAAGAA ACTTTTTTAATTGGACTATGTTTTGACATCTTAGGCAAGAGAAGGAATCACTGAGGTGCATTTCTTGCCCTTCAATCCTG TGGATAAGCGCACAGCAAATACCTACATTGATGGCGAAGGCAACTGGCACAGAAGCAGCAAGGGTGCTCCTGAGCAAGTA AGGATATGCTGATATGCATCAACATAATAACATTTTGATCACTATGACTTAGCTATACTATGTAACAACTAACATGTATT ACTTATGATATATGACTAACCATTTTATATATCAGATTATTGAGCTTTGTGGCCTCAAAGGAGAAGCTTTAAAGAAGGCG CATAACATCATTGATCAGTTTGCTGAGAGGGGTTTGCGTTCATTGGCTGTTGCATACCAGGTGAATAAAGGGTCTAATAT CATGCATTGTAATCTTTTGTCCTCAAACTGTGTCATATTCTTCCTTCCACTAATAAAGTTTTGACATGTCAATTAAAAAC GACCATGAAAGTTTGTAACTGTGGTAAAATTTCATGGTAAATTGTGAGACCATTTATAATATAGAGGCCATGAATTTACA ATTGGAAAGAGAAAGGAGGAAATTAACTTGCAATTTTTTTGCACTTTCGTGCAGACTGTTTCAGAAAAGTCCAAGGAGAG TGCTGGAGAAACATGGGTGTTCGTAGGCCTTTTGCCACTCTTTGACCCTCCAAGGCATGACAGTGCAGAGACTATTCGTC GTGCTCTTGATCTTGGTGTCAATGTTAAGATGATCACCGGTGACCAACTTGCTATTGGGAAAGAAACTGGTCGCAGGCTT GGAATGGGAACCAACATGTATCCTTCATCCTCCCTTCTTGGTGAGAACAAGGATGCTGCCATTGCATCAATCCCAATTGA TGAACTCATTGAGAAGGCTGATGGATTCGCTGGAGTATTCCCTGGTAATGAGATGAATCTATAATATGTTTGGATCATCT TTTTTTCCCCAAAATCAATTCTAGCACACAAAAGCTGCTCATAAAGTTTTATCCCCATAATTGATTTTGTCTTTAGAATC AATTGTAGGAGAATTTCTAAACACACACTAGTTCATGTTAAAGTAACTAAGCCCCATAGGAAAACAAAACCTGAATTTTC ACATGTTCCTTGCAGAGCACAAATATGAGATTGTCAAGAGGTTGCAGGAGATGAAACACATTTGTGGAATGACCGGAGAT GGTGTGAATGATGCCCCAGCACTGAAGAAAGCAGATATTGGAATTGCAGTGGCTGATGCTACTGATGCTGCCAGAAGTGC CTCAGACATTGTTCTGACCGAGCCGGGACTAAGTGTGATTGTGAGTGCTGTATTAACCAGCAGGGCCATCTTTCAGAGGA TGAAGAACTACACAATCTATGCTGTTTCCATCACAATCCGTATTGTGTTTGGATTCATGCTGGTAGCTCTAATATGGAAA TTTGACTTCTCACCTTTCATGGTCCTGATCATTGCTATCTTGAATGATGGAACCATCATGACCATTTCCAAGGATAGGGT GAAGCCATCCCCTTTGCCTGATTCATGGAAACTCAAAGAAATATTTGCCACTGGAGTTGTTCTTGGAGCTTACATGGCCC TCATTACTGTGTTGTTCTTCTATTTAGTTCATGACACCGATTTCTTCACTGTAAGTAATCCTAACCCAACACTTTAGCTC CATACCACTCATCATAAAAGGAAAGTGATTTATAGACATCCGTATAGTACAAAAACTCAACACACATCCAAAGTGAGAAA GTAAGAGAATGTGATAAGAAGTGAGAGATATAGAGAAAGTCAAGTATTGTTACTGATTATAGAATTATGACATGACATGT AACTATGTTCCTTGTTGTTCTTTCAGGATGTTTTTGGTGTTAAGTCAATTGCAGAAAGTGAGGAAGAGCTTAACTCAGCT CTCTACCTTCAAGTGAGTATAATTAGTCAAGCACTCATCTTCGTGACCAGGTCAAGGGGATGGTCTTATGCTGAACGCCC TGGCGTGTTACTTATCACAGCCTTCTTTCTTGCACAACTGGTTAGTTTCTTTCTATTTTTGAAAACATGGTTCCATAAAG AGTCATCATCACTACAAACATATCTGGTTTTAATTTGATTACTTCTTAAATTAGGTGGCAACTATCATTGCTGTGTATGC ACATTGGGACTTTGCTAGAATCCATGGAGTCGGTTGGGGTTGGGCAGGAGTAATCTGGATCTTCACCATTGTCACCTATA TCCCTCTTGATATCATCAAGTTCCTGATCCGCTTGGGATTGTCAGGAAGGGCTTGGGACAACATGATAGATCACAAGGTC TAA
CDS sequence (LotjaGi4g1v0284000.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGGAATCCTTTATCATGGGTCATGGAGGCTGCTGCTATCATGGCCATTGTATTGGCCAATGGAGGGGGAAAGCCACC AGATTGGCAAGATTTTGTTGGTATTGTTGTGTTGCTCATCATCAACTCCACCATTAGTTTCATTGAAGAAAACAATGCAG GCAATGCTGCAGCAGCTTTAATGGCTGGTCTTGCACCCAAAACCAAGGTGTTGAGGGATGGAAAGTGGAGTGAGCAGGAG GCTGCAATATTGGTGCCAGGAGATATTGTCAGCATCAAATTGGGAGATATCGTCCCAGCTGATGCTCGTCTCTTGGAAGG AGATCCCCTCAAGATTGACCAATCTGCCCTCACCGGTGAGTCCCTACCTGTAACTAGGAACCCTGGTGATGAGGTTTTCT CTGGTTCCACCTGCAAACAAGGTGAGATAGAGGCTGTTGTCATTGCCACTGGTGTGCACACCTTCTTTGGCAAGGCTGCA CATCTTGTGGACAGCACCAACAATGTTGGTCATTTCCAAAAGGTTTTGACATCCATCGGAAACTTCTGTATCTGCTCAAT TGCTTTGGGAATGTTGATTGAGCTTGTTGTGATGTATCCCATTCAAAGGAGGGCATATAGAGAAGGTATTGACAATTTGT TGGTTCTTCTCATTGGAGGTATCCCAATTGCCATGCCAACAGTGTTGTCTGTGACCATGGCTATTGGGTCTCACCGTTTG TCTGAGCAAGGAGCCATCACCAAGAGGATGACAGCCATTGAAGAGATGGCTGGGATGGATGTTCTCTGCAGTGACAAGAC TGGAACTCTCACCCTTAACAAGCTTACTGTGGACAAGAACTTGATTGAGGTGTTCCCCAGTGGTATGGATAAGGACACTC TTCTCTTGCATGCTGCCAGGGCTTCTAGAGTTGAAAACCAAGATGCCATTGATGCTTCAATAGTTGGGATGTTGGGCGAC CCCAAGGAGGCAAGAGAAGGAATCACTGAGGTGCATTTCTTGCCCTTCAATCCTGTGGATAAGCGCACAGCAAATACCTA CATTGATGGCGAAGGCAACTGGCACAGAAGCAGCAAGGGTGCTCCTGAGCAAATTATTGAGCTTTGTGGCCTCAAAGGAG AAGCTTTAAAGAAGGCGCATAACATCATTGATCAGTTTGCTGAGAGGGGTTTGCGTTCATTGGCTGTTGCATACCAGACT GTTTCAGAAAAGTCCAAGGAGAGTGCTGGAGAAACATGGGTGTTCGTAGGCCTTTTGCCACTCTTTGACCCTCCAAGGCA TGACAGTGCAGAGACTATTCGTCGTGCTCTTGATCTTGGTGTCAATGTTAAGATGATCACCGGTGACCAACTTGCTATTG GGAAAGAAACTGGTCGCAGGCTTGGAATGGGAACCAACATGTATCCTTCATCCTCCCTTCTTGGTGAGAACAAGGATGCT GCCATTGCATCAATCCCAATTGATGAACTCATTGAGAAGGCTGATGGATTCGCTGGAGTATTCCCTGAGCACAAATATGA GATTGTCAAGAGGTTGCAGGAGATGAAACACATTTGTGGAATGACCGGAGATGGTGTGAATGATGCCCCAGCACTGAAGA AAGCAGATATTGGAATTGCAGTGGCTGATGCTACTGATGCTGCCAGAAGTGCCTCAGACATTGTTCTGACCGAGCCGGGA CTAAGTGTGATTGTGAGTGCTGTATTAACCAGCAGGGCCATCTTTCAGAGGATGAAGAACTACACAATCTATGCTGTTTC CATCACAATCCGTATTGTGTTTGGATTCATGCTGGTAGCTCTAATATGGAAATTTGACTTCTCACCTTTCATGGTCCTGA TCATTGCTATCTTGAATGATGGAACCATCATGACCATTTCCAAGGATAGGGTGAAGCCATCCCCTTTGCCTGATTCATGG AAACTCAAAGAAATATTTGCCACTGGAGTTGTTCTTGGAGCTTACATGGCCCTCATTACTGTGTTGTTCTTCTATTTAGT TCATGACACCGATTTCTTCACTGATGTTTTTGGTGTTAAGTCAATTGCAGAAAGTGAGGAAGAGCTTAACTCAGCTCTCT ACCTTCAAGTGAGTATAATTAGTCAAGCACTCATCTTCGTGACCAGGTCAAGGGGATGGTCTTATGCTGAACGCCCTGGC GTGTTACTTATCACAGCCTTCTTTCTTGCACAACTGGTGGCAACTATCATTGCTGTGTATGCACATTGGGACTTTGCTAG AATCCATGGAGTCGGTTGGGGTTGGGCAGGAGTAATCTGGATCTTCACCATTGTCACCTATATCCCTCTTGATATCATCA AGTTCCTGATCCGCTTGGGATTGTCAGGAAGGGCTTGGGACAACATGATAGATCACAAGGTCTAA
Protein sequence (LotjaGi4g1v0284000.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MWNPLSWVMEAAAIMAIVLANGGGKPPDWQDFVGIVVLLIINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQE AAILVPGDIVSIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTRNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAA HLVDSTNNVGHFQKVLTSIGNFCICSIALGMLIELVVMYPIQRRAYREGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL SEQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFPSGMDKDTLLLHAARASRVENQDAIDASIVGMLGD PKEAREGITEVHFLPFNPVDKRTANTYIDGEGNWHRSSKGAPEQIIELCGLKGEALKKAHNIIDQFAERGLRSLAVAYQT VSEKSKESAGETWVFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGENKDA AIASIPIDELIEKADGFAGVFPEHKYEIVKRLQEMKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG LSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLVALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSW KLKEIFATGVVLGAYMALITVLFFYLVHDTDFFTDVFGVKSIAESEEELNSALYLQVSIISQALIFVTRSRGWSYAERPG VLLITAFFLAQLVATIIAVYAHWDFARIHGVGWGWAGVIWIFTIVTYIPLDIIKFLIRLGLSGRAWDNMIDHKV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| TIGRFAM | 1 | 740 | 740 | 0.0 | ||
| CDD | 1 | 775 | 775 | 0.0 | ||
| SignalP_EUK | 1 | 20 | 20 | - | – | |
| PANTHER | 1 | 793 | 793 | 0.0 | – | |
| Phobius | 1 | 10 | 10 | - | – | |
| SUPERFAMILY | 1 | 779 | 779 | 6.54E-72 | ||
| PANTHER | 1 | 793 | 793 | 0.0 | – | |
| Phobius | 1 | 22 | 22 | - | – | |
| Gene3D | 1 | 93 | 93 | 1.1E-30 | – | |
| Phobius | 11 | 18 | 8 | - | – | |
| Phobius | 19 | 22 | 4 | - | – | |
| Phobius | 23 | 31 | 9 | - | – | |
| Phobius | 32 | 48 | 17 | - | – | |
| TIGRFAM | 35 | 282 | 248 | 5.3E-38 | ||
| Phobius | 49 | 178 | 130 | - | – | |
| Pfam | 65 | 242 | 178 | 2.0E-48 | – | |
| SUPERFAMILY | 66 | 163 | 98 | 9.81E-29 | ||
| PRINTS | 113 | 127 | 15 | 8.1E-43 | – | |
| Gene3D | 146 | 285 | 140 | 6.2E-46 | – | |
| TMHMM | 178 | 200 | 23 | - | – | |
| Phobius | 179 | 201 | 23 | - | – | |
| Phobius | 202 | 212 | 11 | - | – | |
| TMHMM | 213 | 235 | 23 | - | – | |
| Phobius | 213 | 235 | 23 | - | – | |
| Phobius | 236 | 580 | 345 | - | – | |
| SFLD | 245 | 574 | 330 | 0.0 | – | |
| SFLD | 245 | 574 | 330 | 0.0 | – | |
| SUPERFAMILY | 259 | 569 | 311 | 4.95E-38 | ||
| Pfam | 259 | 536 | 278 | 6.7E-16 | – | |
| PRINTS | 263 | 277 | 15 | 8.1E-43 | – | |
| ProSitePatterns | 265 | 271 | 7 | - | ||
| Gene3D | 286 | 429 | 144 | 4.2E-13 | ||
| PRINTS | 379 | 397 | 19 | 2.7E-59 | ||
| PRINTS | 417 | 428 | 12 | 8.1E-43 | – | |
| PRINTS | 439 | 449 | 11 | 8.1E-43 | – | |
| PRINTS | 494 | 510 | 17 | 2.7E-59 | ||
| Gene3D | 496 | 779 | 284 | 6.4E-108 | – | |
| TIGRFAM | 497 | 608 | 112 | 2.1E-28 | ||
| PRINTS | 522 | 541 | 20 | 8.1E-43 | – | |
| PRINTS | 522 | 538 | 17 | 2.7E-59 | ||
| PRINTS | 545 | 557 | 13 | 8.1E-43 | – | |
| PRINTS | 553 | 578 | 26 | 2.7E-59 | ||
| Phobius | 581 | 603 | 23 | - | – | |
| TMHMM | 581 | 603 | 23 | - | – | |
| Phobius | 604 | 608 | 5 | - | – | |
| Phobius | 609 | 626 | 18 | - | – | |
| TMHMM | 610 | 627 | 18 | - | – | |
| Phobius | 627 | 645 | 19 | - | – | |
| TMHMM | 645 | 667 | 23 | - | – | |
| Phobius | 646 | 667 | 22 | - | – | |
| Phobius | 668 | 690 | 23 | - | – | |
| Phobius | 691 | 708 | 18 | - | – | |
| PRINTS | 694 | 715 | 22 | 2.7E-59 | ||
| Phobius | 709 | 719 | 11 | - | – | |
| TMHMM | 719 | 741 | 23 | - | – | |
| Phobius | 720 | 741 | 22 | - | – | |
| Phobius | 742 | 752 | 11 | - | – | |
| TMHMM | 751 | 770 | 20 | - | – | |
| Phobius | 753 | 777 | 25 | - | – | |
| Phobius | 778 | 794 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleotide binding | Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose. | ||
| Molecular function | Proton-exporting ATPase activity, phosphorylative mechanism | Enables the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) -> ADP + phosphate + H+(out). These transporters use a phosphorylative mechanism, which have a phosphorylated intermediate state during the ion transport cycle. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Proton export across plasma membrane | The directed movement of hydrogen ions (protons) from inside a cell, across the plasma membrane and into the extracellular region. |
Expression pattern of LotjaGi4g1v0284000.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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