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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0296200 |
| Transcript ID | LotjaGi4g1v0296200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT1G52540.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9LSC2|Y3589_ARATH PTI1-like tyrosine-protein kinase At3g15890; TrEMBL-Plants: tr|G7JD53|G7JD53_MEDTR Tyrosine kinase family protein; Found in the gene: LotjaGi4g1v0296200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:66965686..66968344) extracted from Lotus japonicus Gifu genome v1.2.
TTGGAATTACCTTGATATGTAAATACAAACGGAAAAGAAAATCTTATGGCATATATTACCTTATGTTAAAATTACACTTA TGTTCTATGATTTTAAAATGTACTTACTATTACTCTGCTTGTATATATATTATGGTTGCTGAAGCCAACAATATGTCATT GATATGTCATGATGTGAAGCGTTGAGTTAGCCGGCCAAGGTCGATTCGGCCGGCATTTTGAGGCCAAACAGTATTATTTG AGGATCAAAACATTGTTTAAAAGAAAATATTCCATTTGGAGACAATTAAGTAATCTTCTTAACCCTTCATTCCCTGCATT CTTCATCCCATACTACCAATTATGGGATCCTCCTTCAGTTGCTGCGGTTCAGAGAAGGTTGAAGAAGGGTATGTAAAATC ACGATTGGCTAGTCATCATTCATGATAGTTAATTGTTTGCATGATCTTTAATGTTATTAATTTTGCCATCAAAATCATGT AATTTTGTAGGCCAACATCATTTGGGTCAGTTAACAATTCATGGAGAATATTTACATACAAGGAGTTGCATGCAGCTACC GGCGGGTTCAGTGATGATAATAAGCTTGGTGAAGGTGGGTTTGGAAGTGTCTATTGGGGAAGAACTAGTGATGGTCTCCA GGTATAAATACAAATCTTATAGAATTAACGCTTATATAATTTTTTAGTAGAGTTTATGTAAGTAGACTATGAACTACTTG TAAGCCGCTGTTTTAAACTTAATTTTATAAGGTAGTCAGATTCGCTTATAAATTAAATAAGATGCCTACTTATAGCCTAT TTTGAGCTTATCTCAATAAGATTCTCGAATTAGCTCCATAAGCGCTTAATTAAGTTGTTTAATTACCCGAAAACACCCTA ACTCTTATAGCTACCACTTGTAGATAGCGGTGAAAAAACTGAAAGCAATGAACTCAAAGGCAGAGATGGAATTTGCAGTG GAAGTTGAAGTTCTTGGAAGGGTTAGGCACAAAAATTTACTTGGTCTCAGGGGATATTGTGTCGGCGATGATCAACGGCT CATAGTCTACGATTACATGCCGAATCTTAGCCTGCTTTCTCATCTCCATGGCCAATTTGCTGTTGAAGTGCAACTGAACT GGCAAAAGAGAATGAAGATTGCAATTGGTTCTGCAGAAGGAATTCTGTAAGCTTTCACCAGATTAAGATTTTCTATCTTC AAATTGTGTCTCGTTCTCTGTCCCACCAGTAAAATTGTGTCAAATAAGACATAATTTAGGGACAGGGATCTCGATCCGCT TTCTCCTAACTTTTCAAGTATTAATTCCTTTTTTTTAATCATAATTAATCAATTGAATTATGTTCTCTAGAATAACCTTG CAAGTTATTTTCTAAAACCACTTTTATATAACACCTCAAATATAACTTTTGCTAGGTACTTGCATCATGAGGTCACACCC CACATTATCCATAGGGACATCAAGGCAAGCAATGTGCTTCTGAACTCAGATTTCGAGCCTCTAGTCGCGGATTTTGGTTT CGCAAAGCTGATCCCAGAAGGCGTTAGCCACATGACAACCCGAGTTAAGGGTACCTTGGGATACTTGGCACCTGAATATG CCATGTGGGGAAAAGTCTCAGAAAGCTGTGATGTCTATAGCTTTGGAATTCTTCTGTTAGAGCTAGTAACCGGTAGAAAG CCGATAGAGAAGCTCCCGGGCGGCGTTAAGAGAACTATAACCGAGTGGGCTGAGCCTTTGATATCTAAAGGAAGGTTCAG GGATTTGGTTGATCCAAAGCTCAGAGGGAACTTTGATGAAGATCAAGTCAAACAAACTGTGAATGTTGCTGCTCTTTGTG TGCAGAGTGAGCCTGACAAGCGACCTAACATGAAGGAAGTGGTTAATCTTCTGAAAGGGCATGAACCTGATGCGAAAGTT ACTAAGATGAGGATGGATAGTATCAAATATAATGATGAACTTTATGCACTTGATCAACCTAGTGATGATGATGAAGATTA TGATGTAAGTGCTAGCTATGGTGTTTTTAGTGCCATTGAAGTGCAAAAGATGAATGATCCTTATAGGCGCGGCGGTAACA CGAGAATGGGCTAAATAAAAGTAATGAACTTATGTATTTTTGTGATTTGAAAAGACTTTCGAATTTGTTGGTAATTGAAT CAGCTTCTTAATTAGTATCACTTTCTGTAATGATTAATTTGTTCATCTTATTCTCTTGAAGTCTTACTCACATGGTTAGC AAGAACCATTTCAAAAATCTTTCACTATTCCTGAAATTATGGCTTAAGCAGTAAATCAAATGCATCATTATGATTGTCCC AACAATTCCTAAAGGTCTTATAGAAATTTAGAGTGCAGAAAATAGCATTCCATTGAGAATCTTGCAGGACTCCTGAATCT GATAGTGTAGGATATTGCTTCCATTGTTTAATTTGATTTCTTTTCTCTTTCAAATTTTTGACATGTCATCCTTAATTTTC AGTATTTCTTAATCTCTTTCCCCCCTTTTCAATGTGCCACTTTGTATTTAAGATGGAGGGAAATTGCACACTATTATTCA GTGGTTGACACTTGACACTTTGACATATCAGAATTGTGTAAATTATAGGTTTCGGTTTTCTAAATAGAGATGTATCAACG AACTCTAACTGTTTCTCTT
CDS sequence (LotjaGi4g1v0296200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGATCCTCCTTCAGTTGCTGCGGTTCAGAGAAGGTTGAAGAAGGGCCAACATCATTTGGGTCAGTTAACAATTCATG GAGAATATTTACATACAAGGAGTTGCATGCAGCTACCGGCGGGTTCAGTGATGATAATAAGCTTGGTGAAGGTGGGTTTG GAAGTGTCTATTGGGGAAGAACTAGTGATGGTCTCCAGATAGCGGTGAAAAAACTGAAAGCAATGAACTCAAAGGCAGAG ATGGAATTTGCAGTGGAAGTTGAAGTTCTTGGAAGGGTTAGGCACAAAAATTTACTTGGTCTCAGGGGATATTGTGTCGG CGATGATCAACGGCTCATAGTCTACGATTACATGCCGAATCTTAGCCTGCTTTCTCATCTCCATGGCCAATTTGCTGTTG AAGTGCAACTGAACTGGCAAAAGAGAATGAAGATTGCAATTGGTTCTGCAGAAGGAATTCTGTACTTGCATCATGAGGTC ACACCCCACATTATCCATAGGGACATCAAGGCAAGCAATGTGCTTCTGAACTCAGATTTCGAGCCTCTAGTCGCGGATTT TGGTTTCGCAAAGCTGATCCCAGAAGGCGTTAGCCACATGACAACCCGAGTTAAGGGTACCTTGGGATACTTGGCACCTG AATATGCCATGTGGGGAAAAGTCTCAGAAAGCTGTGATGTCTATAGCTTTGGAATTCTTCTGTTAGAGCTAGTAACCGGT AGAAAGCCGATAGAGAAGCTCCCGGGCGGCGTTAAGAGAACTATAACCGAGTGGGCTGAGCCTTTGATATCTAAAGGAAG GTTCAGGGATTTGGTTGATCCAAAGCTCAGAGGGAACTTTGATGAAGATCAAGTCAAACAAACTGTGAATGTTGCTGCTC TTTGTGTGCAGAGTGAGCCTGACAAGCGACCTAACATGAAGGAAGTGGTTAATCTTCTGAAAGGGCATGAACCTGATGCG AAAGTTACTAAGATGAGGATGGATAGTATCAAATATAATGATGAACTTTATGCACTTGATCAACCTAGTGATGATGATGA AGATTATGATGTAAGTGCTAGCTATGGTGTTTTTAGTGCCATTGAAGTGCAAAAGATGAATGATCCTTATAGGCGCGGCG GTAACACGAGAATGGGCTAA
Protein sequence (LotjaGi4g1v0296200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSSFSCCGSEKVEEGPTSFGSVNNSWRIFTYKELHAATGGFSDDNKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAE MEFAVEVEVLGRVRHKNLLGLRGYCVGDDQRLIVYDYMPNLSLLSHLHGQFAVEVQLNWQKRMKIAIGSAEGILYLHHEV TPHIIHRDIKASNVLLNSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLELVTG RKPIEKLPGGVKRTITEWAEPLISKGRFRDLVDPKLRGNFDEDQVKQTVNVAALCVQSEPDKRPNMKEVVNLLKGHEPDA KVTKMRMDSIKYNDELYALDQPSDDDEDYDVSASYGVFSAIEVQKMNDPYRRGGNTRMG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 16 | 343 | 328 | 1.4E-158 | – | |
| PANTHER | 16 | 343 | 328 | 1.4E-158 | – | |
| Gene3D | 16 | 117 | 102 | 2.0E-31 | – | |
| SUPERFAMILY | 24 | 321 | 298 | 2.56E-80 | ||
| SMART | 42 | 313 | 272 | 4.7E-29 | ||
| ProSiteProfiles | 42 | 319 | 278 | 37.234 | ||
| Pfam | 45 | 313 | 269 | 1.2E-42 | ||
| ProSitePatterns | 48 | 71 | 24 | - | ||
| CDD | 48 | 315 | 268 | 4.76002E-109 | – | |
| Gene3D | 118 | 336 | 219 | 3.3E-62 | – | |
| ProSitePatterns | 164 | 176 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi4g1v0296200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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