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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0296200 |
| Transcript ID | LotjaGi4g1v0296200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT1G52540.2 Protein kinase superfamily protein; Swiss-Prot: sp|Q9LSC2|Y3589_ARATH PTI1-like tyrosine-protein kinase At3g15890; TrEMBL-Plants: tr|G7JD53|G7JD53_MEDTR Tyrosine kinase family protein; Found in the gene: LotjaGi4g1v0296200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:66966027..66967779) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGATCCTCCTTCAGTTGCTGCGGTTCAGAGAAGGTTGAAGAAGGGTATGTAAAATCACGATTGGCTAGTCATCATTC ATGATAGTTAATTGTTTGCATGATCTTTAATGTTATTAATTTTGCCATCAAAATCATGTAATTTTGTAGGCCAACATCAT TTGGGTCAGTTAACAATTCATGGAGAATATTTACATACAAGGAGTTGCATGCAGCTACCGGCGGGTTCAGTGATGATAAT AAGCTTGGTGAAGGTGGGTTTGGAAGTGTCTATTGGGGAAGAACTAGTGATGGTCTCCAGGTATAAATACAAATCTTATA GAATTAACGCTTATATAATTTTTTAGTAGAGTTTATGTAAGTAGACTATGAACTACTTGTAAGCCGCTGTTTTAAACTTA ATTTTATAAGGTAGTCAGATTCGCTTATAAATTAAATAAGATGCCTACTTATAGCCTATTTTGAGCTTATCTCAATAAGA TTCTCGAATTAGCTCCATAAGCGCTTAATTAAGTTGTTTAATTACCCGAAAACACCCTAACTCTTATAGCTACCACTTGT AGATAGCGGTGAAAAAACTGAAAGCAATGAACTCAAAGGCAGAGATGGAATTTGCAGTGGAAGTTGAAGTTCTTGGAAGG GTTAGGCACAAAAATTTACTTGGTCTCAGGGGATATTGTGTCGGCGATGATCAACGGCTCATAGTCTACGATTACATGCC GAATCTTAGCCTGCTTTCTCATCTCCATGGCCAATTTGCTGTTGAAGTGCAACTGAACTGGCAAAAGAGAATGAAGATTG CAATTGGTTCTGCAGAAGGAATTCTGTAAGCTTTCACCAGATTAAGATTTTCTATCTTCAAATTGTGTCTCGTTCTCTGT CCCACCAGTAAAATTGTGTCAAATAAGACATAATTTAGGGACAGGGATCTCGATCCGCTTTCTCCTAACTTTTCAAGTAT TAATTCCTTTTTTTTAATCATAATTAATCAATTGAATTATGTTCTCTAGAATAACCTTGCAAGTTATTTTCTAAAACCAC TTTTATATAACACCTCAAATATAACTTTTGCTAGGTACTTGCATCATGAGGTCACACCCCACATTATCCATAGGGACATC AAGGCAAGCAATGTGCTTCTGAACTCAGATTTCGAGCCTCTAGTCGCGGATTTTGGTTTCGCAAAGCTGATCCCAGAAGG CGTTAGCCACATGACAACCCGAGTTAAGGGTACCTTGGGATACTTGGCACCTGAATATGCCATGTGGGGAAAAGTCTCAG AAAGCTGTGATGTCTATAGCTTTGGAATTCTTCTGTTAGAGCTAGTAACCGGTAGAAAGCCGATAGAGAAGCTCCCGGGC GGCGTTAAGAGAACTATAACCGAGTGGGCTGAGCCTTTGATATCTAAAGGAAGGTTCAGGGATTTGGTTGATCCAAAGCT CAGAGGGAACTTTGATGAAGATCAAGTCAAACAAACTGTGAATGTTGCTGCTCTTTGTGTGCAGAGTGAGCCTGACAAGC GACCTAACATGAAGGAAGTGGTTAATCTTCTGAAAGGGCATGAACCTGATGCGAAAGTTACTAAGATGAGGATGGATAGT ATCAAATATAATGATGAACTTTATGCACTTGATCAACCTAGTGATGATGATGAAGATTATGATGTAAGTGCTAGCTATGG TGTTTTTAGTGCCATTGAAGTGCAAAAGATGAATGATCCTTATAGGCGCGGCGGTAACACGAGAATGGGCTAA
CDS sequence (LotjaGi4g1v0296200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATAGTTAATTGTTTGCCAACATCATTTGGGTCAGTTAACAATTCATGGAGAATATTTACATACAAGGAGTTGCATGC AGCTACCGGCGGGTTCAGTGATGATAATAAGCTTGGTGAAGGTGGGTTTGGAAGTGTCTATTGGGGAAGAACTAGTGATG GTCTCCAGATAGCGGTGAAAAAACTGAAAGCAATGAACTCAAAGGCAGAGATGGAATTTGCAGTGGAAGTTGAAGTTCTT GGAAGGGTTAGGCACAAAAATTTACTTGGTCTCAGGGGATATTGTGTCGGCGATGATCAACGGCTCATAGTCTACGATTA CATGCCGAATCTTAGCCTGCTTTCTCATCTCCATGGCCAATTTGCTGTTGAAGTGCAACTGAACTGGCAAAAGAGAATGA AGATTGCAATTGGTTCTGCAGAAGGAATTCTGTACTTGCATCATGAGGTCACACCCCACATTATCCATAGGGACATCAAG GCAAGCAATGTGCTTCTGAACTCAGATTTCGAGCCTCTAGTCGCGGATTTTGGTTTCGCAAAGCTGATCCCAGAAGGCGT TAGCCACATGACAACCCGAGTTAAGGGTACCTTGGGATACTTGGCACCTGAATATGCCATGTGGGGAAAAGTCTCAGAAA GCTGTGATGTCTATAGCTTTGGAATTCTTCTGTTAGAGCTAGTAACCGGTAGAAAGCCGATAGAGAAGCTCCCGGGCGGC GTTAAGAGAACTATAACCGAGTGGGCTGAGCCTTTGATATCTAAAGGAAGGTTCAGGGATTTGGTTGATCCAAAGCTCAG AGGGAACTTTGATGAAGATCAAGTCAAACAAACTGTGAATGTTGCTGCTCTTTGTGTGCAGAGTGAGCCTGACAAGCGAC CTAACATGAAGGAAGTGGTTAATCTTCTGAAAGGGCATGAACCTGATGCGAAAGTTACTAAGATGAGGATGGATAGTATC AAATATAATGATGAACTTTATGCACTTGATCAACCTAGTGATGATGATGAAGATTATGATGTAAGTGCTAGCTATGGTGT TTTTAGTGCCATTGAAGTGCAAAAGATGAATGATCCTTATAGGCGCGGCGGTAACACGAGAATGGGCTAA
Protein sequence (LotjaGi4g1v0296200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIVNCLPTSFGSVNNSWRIFTYKELHAATGGFSDDNKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVL GRVRHKNLLGLRGYCVGDDQRLIVYDYMPNLSLLSHLHGQFAVEVQLNWQKRMKIAIGSAEGILYLHHEVTPHIIHRDIK ASNVLLNSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLELVTGRKPIEKLPGG VKRTITEWAEPLISKGRFRDLVDPKLRGNFDEDQVKQTVNVAALCVQSEPDKRPNMKEVVNLLKGHEPDAKVTKMRMDSI KYNDELYALDQPSDDDEDYDVSASYGVFSAIEVQKMNDPYRRGGNTRMG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 9 | 107 | 99 | 2.1E-31 | – | |
| PANTHER | 11 | 333 | 323 | 2.7E-158 | – | |
| PANTHER | 11 | 333 | 323 | 2.7E-158 | – | |
| SUPERFAMILY | 14 | 311 | 298 | 2.29E-80 | ||
| SMART | 32 | 303 | 272 | 4.7E-29 | ||
| ProSiteProfiles | 32 | 309 | 278 | 37.234 | ||
| Pfam | 35 | 303 | 269 | 1.1E-42 | ||
| CDD | 38 | 305 | 268 | 3.95708E-109 | – | |
| ProSitePatterns | 38 | 61 | 24 | - | ||
| Gene3D | 108 | 326 | 219 | 3.0E-62 | – | |
| ProSitePatterns | 154 | 166 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi4g1v0296200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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