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Field | Value |
---|---|
Gene ID | LotjaGi4g1v0303900 |
Transcript ID | LotjaGi4g1v0303900.2 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Villin; TAIR: AT4G30160.1 villin 4; Swiss-Prot: sp|O65570|VILI4_ARATH Villin-4; TrEMBL-Plants: tr|K7LWU7|K7LWU7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0303900 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:67888632..67896097) extracted from Lotus japonicus Gifu genome v1.2.
ATGTCTATCTCTGTGAGAGATTTGGATCCAGCTTTCAAGGGAGCTGGACAAAAGGCGTATCCTGCACTAGTTGAAACTTG AAACTAATATATTGTACTGTTTATAAATTATCATATTTTCATACTGACATTAATTCATTCAAGCTTGCTTCTCCATTTGG CTGTGTATGTTTGGTCTTTATTTTTCACCTGTATACTTTCAAGTGCTTCTCAGTTTTTCTCCTTAACCATATATCTATAG CGGACTTGAAATATGGCGTATTGAGAATTTTAATCCGGTTCCCATTCCTCAGTCTTCTTATGGAAAGTTTTTCAACGGGG ACTCATATGTGATTCTGAAGGTAAGCCATATATTCCATATGATTGTTCATTCAAAGAATGCTAGCCTCATGTTAGAATCC ACTGTTGCAAGAAGCTTGTATTTTTGTTTAGTACTGTATTATATGAAGATTTGAATTTTAAAACCCAACCAGCTTTTCCC ATGCCGAAAAATTGTATTGGTTTGCAATGACATGTAAGATCAATTATCGTATTGTTTATTTTTTTCTTCGTAGAACATTC AAGTAGTTTTCCTTGTGAGAAATTTAATATATAGATCTTTGGTTCAAATCTCTTTGTATTCCTCTGAATCACTTATGTGG GCTGAAATTTTGTTATTCTGTGTTTTTATGGATAAGCTTCAATACAGTAGATTTTATTTTTCTTAAGTTTCTTGCACTTC CTCCATTATATATGCAGCAATGTCTTTCATTAGTTTTAACTTTTTTCTTTTCCCTTCAACTCCATGTAGACAACCGCTTC AAAAAGTGGTGCTCTGCGCCATGATCTCCATTACTGGCTTGGTAAAGACACCAGTCAGGTAACTTTTGCTGTTTATAATT TCTATTCCCTTGAACCTGTTTTTGGTTTGGTATTTGACACAATTTCCTTCTGTTATTTGTTCACCGGTGATAATAACTAT AAAATAGGATGAAGCTGGTGCTGCAGCTATCAAAACAGTTGAGTTGGATGCAGCTCTAGGAGGACGTGCTGTTCAGTATC GCGAAGTACAGGGTCGTGAGACGGATAAGTTCCTCTCATATTTCAAACCATGTATTATACCACAAGAAGGTGGAGCTGCC TCAGGTTTTAAACATGTTGAGGCTGAAGAACACAAGGCACGATTGTTTGTATGCAAAGGGAAACATGTTGTGCATGTTAA AGAGGCAAGTTTGACATTATTCCTATGCTATTCTAGTCTTGTATATATTATTGTGCTCAGTTTATATAGATAGGATGCAT GTAAATAAACATTAATTTCTACTTGCTGATTAACTATTTGTGTTGGTTGTAGGTTCCTGCTGCTCGATCTTCACTCAACC ATGATGATGTTTTTATCCTGGATACTGAGTCAAAAATCTTCCAATTTAATGGTTCTAACTCATCTATTCAAGAAAGGGCT AAAGCACTGGAAGTTGTCCAATTTATTAAGGACACCTACCATGATGGGAAATGCGATGTAGCTGCTGTTGGTAAGTGTAC AAGTATATTCTATAGTTCTGAAGGTGGTTGGTTTCTTAGTATCACTAATTGGATGGATATACTTGAATTTGCATGAAGAG GATGGAAAGTTGATGGCTGATTCTGAAGCTGGAGAGTTCTGGGGTTTCTTTGGGGGCTTTGCTCCCCTTCCACGGAAAAC AGTCAGTGATGATGATAAGCTACCTGATTCTCATCCTCCAAAGCTGCTTTGGTAATATTCTGTTTCAGTATATTCCTTTA TTTTTTTAGCAAAGGGATATTTGGACTTCATTCATTAATGTTTAAATGTGTCTATAATTGTCCTCCTCCACTATTATTTT TATTCCCTTTCATCTGCAAACCTGTGTTGTCTATCAATGTAAGACTGCTATAAATATACTTTTCTTTTAGCCTAAAGATT TATAAGTTGATAACGCTGAATTATTGTGAGCTGTGACAACTAACAACTATATTGTTGAAATTATATTGATAGATTAGATT CTATAATGCTCTAGTTATAATGAATTATCACTTTTCCAGTGTTGAAAAGGGGAAGGCAGAACCCATTGAAACTGATTCTT TGACAAAGGAGTTACTGGACACAAACAAATGCTATATTCTAGATTGTGGGTTGGAAGTGTTTGCGTGGATCGGAAGAAAC ACACCACTCGATGAAAGAAAAAGTGCAAGTAGAGCTGCAGATGTAACATTTCTTGTTTCTTTCTCAGTATTGTTGAGAAT TTTTGTTTGAAGTTTTAGTGAGTCCTGAATTTCTGTTGACTAACAAACAGGAGTTACTCAGTGACACTGATCGACCAAAA TCCCAAATAATTCGTGTAATTGAAGGATTTGAAACCGTCATGTTCAGGTCCAAATTTGATTCTTGGCCTCAGACAACCAA TGCAACAATGCCGGAAGAAGGTCGTGGCAAGGTCGCAGGTTAGTTTCAAAAACAATTTGTTGCTATTGGCCTGAATTGGT TTCTTCACCTTTGAATTGGTTTCATTAGCATCATATGCTCGATTATCATTGTATTTTTCTAATTATTTTTTTTGCCTTGT TTATGACATTCTAGCACTTCTAAAACGTCAAGGATTGGATGTCAAGGGCCTCGTGAAAGCTGATCCAGTAAAAGAAGAAC CTCAACCCTTCATAGATTGCACAGGCCATTTGCAGGTACTTTCAAGCTTGACTAAAGCTCATTTAAAACCTTACTCTATT AGCCATTAGGTACAACCTCATTCTGGAACCTTACTCTTATTAGCCATTAGGTATAACCTCATTTAAAGCTCGACTAAAGC TCTTCTTCCGTTCTACGCATTATCCTTTTGTTTTGGGAGTCCGAGAATCGTCCCACATTCCACTATTCACTTCAAAATTA TTGTTGAGACTCGAGGCATCAGAGTGATAGTAGTTTCCAGAGTTTTATGAAGGGTTGTAGACTTGTTCTTGATATCTTAG TGTGTTACCAATACTAGGTATTGTTTAATAAGCATTTGGTGACTATTGACTAGTATCCTATGAGAATTCAGAATGATGTT TGTATTTCTCCCTATTTGGGTGGACTGACTATCATTTGAGTATACTTAATTTCCTATTTTTCTGTTTTGCTTAATTGTTT ATGTTGTTGATAAGAGCTTTACCATAACTGCACACAGGTTTGGCGTGTGAATGGTCAGGAAAAGATTCTTCTTGCAGCCA ATGATCAGTCAAAATTGTATAGTGGAGATTGCTACATTTTTCAGTATTCATATCCTGGAGAAGATAGGGAGGAGTATCTT ATAGGAACATGGATTGGAAAGAGTAGTGTCGAGGTGAAATATTTGTGGAGTTTTATTGTTCATGATGATTTTTTTATAAG TAAAATCATTCAAAATCATTGTTTGGAGTTGAAACAATACTAGTGAATCATAACTTATATTTCATCACACCGTACACAGC ATTGTTAACTGTTTTGGAACCATCTAGTGTTGAATAAATGCATAACATAATTTAATTGGTCTTTCTATACATTTGCATTT ACCTGCATTCCTTACATTCTTTCTTTGGTGAAATTAGGAAGAAAGACTTTCAGCTATTTCACTAGCAAGCAAAATGGTTG AGTCAATGAAGTTTATTCCATCCCAGGTAATTTTTCTTCAAATGTATTTTTTTTTTTTTCAATTTTTTGAGAGATTATTT GTGCTTGTTGCTTATGACTTATTGATGTTATCCATTGTAATTGATTGAAGGCTCGTATTTATGAAGGAAGTGAACCAATT CAATTTAATGCTATCCTCCAAAGCTTTATTGTTTTTAAGGTTTGTGGGATTTTGATATTGCGTATTCAAGAAAAAAACTT ATTTTTGGTAATATAATTACTTTTTCTTTAGTACTGGTCATTTATTTCAATTGTCTATCAGGGTGGACTTAGTGAGGGAT ACAAGAATTACATTGCGGAGAAGGAAATTCCAGATGATACATACAGTGAGGACGGTGTTGCATTATTCCGCATCCAGGGA TCTGGACCAGACAATATGCAAGCTATACAAGTGGAACCAGTATGCATCTTGTTTATTTATAGTGACCATCTCTATCCACT TACTATATGCAATTTACACTATTTAATGATACAGATTTTATGTATATAATCAATATTTTTCTTCCCATATTCTTTTGTCA AACAGGTTGCTTCCTCCTTGAATTCCTCTAATTGTTTCATACTTCATGATGGATCCACGGTTTTTACTTGGTCTGGAAGT TTTACAACTTCAGATGACCTGGAACTTGTTGAGAGAATGCTGGATTTGATTAAGGTATCTTACGTTCCAAGATGCATGAT GTACTTAAATATGAAAATTTTGATTCGCCCAAACAAACTTCACAAGATTCTTTTTTCATTTATCAACATATTATGTTGGA TTAGCTGAAAAAGTGTGGTATTTTATATGCTTGCATGTCAAAATGGTTAACTATACCGGTTGTTGCCAAACTTGCCATTT GGTCTGTATATGATTGTCTTAAAGTGATCCAGGGTTTTGGGTTCTATCCAGTAAGAAGCATTTCTTCCATGCCACATCAC CCAAAATGGAAATTATGCTGATATTAAAAATGCATCACTTAATGAAAACATATGCTTGCCAATTGTCTGCAGCCAGAGTT ACAAAGCAAGCCTCAAAAGGAAGGTGCAGAATCTGAACAATTTTGGGATTTGTTAAGAGGAAAAACTGAATATCCCAGTC AAAAGATTGCGAGGGACGCTGAAAATGATCCTCATCTATTTTCTTGCAACTACTCAGGAGGTAAGTACTACTTTCTTGTT AGTCTGGTAGATTTGTGACAGTTTCTTTCTTCTTGAAGACAAATGGCTGACTTGTTTATTACGGTTTCTTTCCCTTCCGG ATTGACCAACGTGCAGGAAACTTGAAGGTGTGTACACCCACTGATCTATTGAATATTGATATGCATGTTTTTAGAATTGG ATTTATTCTTCCGCCATACATTAATCTGAAGCGATGTTTGCAGGCGACAGAGATATACAACTTTTCCCAGGATGATTTGA TGACAGAAGATATTTTCGTCTTGGATTGTCACTCTGAAATCTTTGTGTGGGTTGGCCAGGAGGTTGACCCCAAGAGTAGA ATGCAGGCTCTAACAATTGGTGAGGTATAACTGGTAGTTGCTTTGGCAGGAAGCTAGAAACATAGTAGTTTAATTTTGTA ACTAGTTTTTTAAAGTCTGTTATCAATCTAACTTCTTACCTGTTGGTTAAATGTTCTGTTTTTTTAGGTTTTTTAGTATG AATTTAACTATGCCAACTCAATTTTTCACTGCATGTTTGGGAGAGTTTCTTTCCTTCTTTATTTTTTGGAGGAATCAATC ATTTTTCTAACGCTCTTGAGAAATTATTTTCTTAAAATAAGTTGAACCAAATATGCTCTCAATATCTTTTACATATTAAT ACTTCTGAAGTCAGAGGTATGCAATCCTTAACTTATTCTTTGGAAATGTACAGAAATTTCTTGAGGGTGATTTTCTTCTA GAAAAATTATCTCGTGTAGCTCCAATATATGTTGTCATGGAAGGTAGTGAGCCACCTTTCTTCACTCGCTTCTTTAAATG GGATTCTGCCAAATCTGCAGTAAGTTTTTCATTGCAATAGCATACTTAAGTAACTTCGAATAGTCTTAAAATTCTGACTT TTGATGATTCCTTTGTTTTGGTAGATGCTGGGAAACTCATTTCAAAGAAAACTCACAATCGTGAAAAATGGGGGCACTCC ACCTTTGGTTGTAAGTCGTCTCTTCTTTGCTTCCGTTTTTTTAGAGTGAGGAGTAGCCACAAGGAACTCTTTTAGTCTGA ATTTTCATATTATTTTGATAGCTTATGTTATACCTGTCTATAATAACTGTTTCGAGTAAGATGATTTGTATGGATAATGA TTAATAGACTAGTTCTGTATGTTTAATGTCATAATATAAATATGAAATTATTAACAGTTGGAGCCATAGTCTAAGGGAGA GGGCCAAAATTCAAATCTCGAGTTGGTAATTGTTGAGAGGATCTCCTTGATGTGACAGTGCCCTGGAGATTTGTTTTACG CAATGCATGTGGGCTGTGGCATACCCTGGTGAAAAAAATAAGTAAATTCAGAAGGGTGGCATAAATATATGAATGAACCA ACCAAGAGCCAGAAGACAGAAATAAAGGATATCACTTAAAGAAACTGCTTCTTTTCGACAATTAGTAGTTGCCTAATCTG ATATGAGAGCTTACAGAAAATTATCAGTATTTAGTTGTGAGAAAGTGACCTGAATAGGTTGATTAAAGGGAATATTATCT TACTATTGAATTCAAGAATGTCAACTGGGTTCTGGTCCTTCATAGAAGTTGCATAGGTATGACTTGGCTTTAGATTAAAT GACATGATGTAGTTTAGAAAAAATAATACTCTTTTGATTTTAGGTTGTAGCCAACATGTTTCAGTTTCTCAGATCATTCC AATGTACTACATCGATTAATTTGCTACAACTTATTGCTTTACTGTGTTCATATTAATATTTTGATTGTATTTGCATTTAT CTGTTTGGTTGATACATTATCAGAAACCCAAACGAAGAGCATCCGTATCTCTTGGTGGAAGGTCTAGTAGTGTACCAGAT AAATCTCAGCGTTCCCGCAGCATGTCTGTTAGTCCTGATCGTGTTCGTGTGAGAGGAAGATCTCCAGCTTTTAATGCACT GGCAGCTAATTTCGAGAACACAAATGCTAGGAACCTTTCAACTCCACCTCCAATTATTAGGAAATTGTACCCAAAATCTA TGAGTCCAGATACAGCAAAACTGGGACCTAAGTCTTCAGCCATAGCTAGCATTAGTTCTACTTTTGAACCACCTTCAGCA CGAGAAAAATTGATTCCTCGGTCACTTAAAGGTATGCAAAATAGATGAGTTCATCCAGATTTTATGTTCCTATCTGAATT TTATCTCATGCAAAATGCCTGTTCTCTTCTCTGGGCTGTTGTGATGTAGCGAGTTCAGGTGCCTCCAAATCAGACCCGGA GATAAGTGAAAAGGATGATTCTATGAGCAGCACAACAGAATCTCCTAATGTACAGGGAGATGTGAAAGAGGGTGAAGCTG AAGATGATGAAGGTCTCCCAGTTTACCCATATGAAAGTGTTAACACAGATTCTACAGATCCTGCAACAGACATTGACGTC ACTAAACGAGAGGTATAATGAAAATGTTGTCTAGCTATAGCATCACCTTTTGTTGTTTTTTTTTTTTCAAACTCCAATCT TCGCAACTTGCATCTTATATTTAAAGTTTTCTTTCATTCTAGTTCTGACTTGTTTGAGCTTGGTGCTTGCAGGCTTATCT GTCACCTGAGGAGTTTCAAAAGCACTTAGGGATGACTAAGAAAGAATTTAACAAATTGCCAAAATGGAAACAGAACAAAC TCAAAATGGCTGTTAATTTGTTTTGA
CDS sequence (LotjaGi4g1v0303900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTATCTCTGTGAGAGATTTGGATCCAGCTTTCAAGGGAGCTGGACAAAAGGCCGGACTTGAAATATGGCGTATTGA GAATTTTAATCCGGTTCCCATTCCTCAGTCTTCTTATGGAAAGTTTTTCAACGGGGACTCATATGTGATTCTGAAGACAA CCGCTTCAAAAAGTGGTGCTCTGCGCCATGATCTCCATTACTGGCTTGGTAAAGACACCAGTCAGGATGAAGCTGGTGCT GCAGCTATCAAAACAGTTGAGTTGGATGCAGCTCTAGGAGGACGTGCTGTTCAGTATCGCGAAGTACAGGGTCGTGAGAC GGATAAGTTCCTCTCATATTTCAAACCATGTATTATACCACAAGAAGGTGGAGCTGCCTCAGGTTTTAAACATGTTGAGG CTGAAGAACACAAGGCACGATTGTTTGTATGCAAAGGGAAACATGTTGTGCATGTTAAAGAGGTTCCTGCTGCTCGATCT TCACTCAACCATGATGATGTTTTTATCCTGGATACTGAGTCAAAAATCTTCCAATTTAATGGTTCTAACTCATCTATTCA AGAAAGGGCTAAAGCACTGGAAGTTGTCCAATTTATTAAGGACACCTACCATGATGGGAAATGCGATGTAGCTGCTGTTG AGGATGGAAAGTTGATGGCTGATTCTGAAGCTGGAGAGTTCTGGGGTTTCTTTGGGGGCTTTGCTCCCCTTCCACGGAAA ACAGTCAGTGATGATGATAAGCTACCTGATTCTCATCCTCCAAAGCTGCTTTGTGTTGAAAAGGGGAAGGCAGAACCCAT TGAAACTGATTCTTTGACAAAGGAGTTACTGGACACAAACAAATGCTATATTCTAGATTGTGGGTTGGAAGTGTTTGCGT GGATCGGAAGAAACACACCACTCGATGAAAGAAAAAGTGCAAGTAGAGCTGCAGATGAGTTACTCAGTGACACTGATCGA CCAAAATCCCAAATAATTCGTGTAATTGAAGGATTTGAAACCGTCATGTTCAGGTCCAAATTTGATTCTTGGCCTCAGAC AACCAATGCAACAATGCCGGAAGAAGGTCGTGGCAAGGTCGCAGCACTTCTAAAACGTCAAGGATTGGATGTCAAGGGCC TCGTGAAAGCTGATCCAGTAAAAGAAGAACCTCAACCCTTCATAGATTGCACAGGCCATTTGCAGGTTTGGCGTGTGAAT GGTCAGGAAAAGATTCTTCTTGCAGCCAATGATCAGTCAAAATTGTATAGTGGAGATTGCTACATTTTTCAGTATTCATA TCCTGGAGAAGATAGGGAGGAGTATCTTATAGGAACATGGATTGGAAAGAGTAGTGTCGAGGAAGAAAGACTTTCAGCTA TTTCACTAGCAAGCAAAATGGTTGAGTCAATGAAGTTTATTCCATCCCAGGCTCGTATTTATGAAGGAAGTGAACCAATT CAATTTAATGCTATCCTCCAAAGCTTTATTGTTTTTAAGGGTGGACTTAGTGAGGGATACAAGAATTACATTGCGGAGAA GGAAATTCCAGATGATACATACAGTGAGGACGGTGTTGCATTATTCCGCATCCAGGGATCTGGACCAGACAATATGCAAG CTATACAAGTGGAACCAGTTGCTTCCTCCTTGAATTCCTCTAATTGTTTCATACTTCATGATGGATCCACGGTTTTTACT TGGTCTGGAAGTTTTACAACTTCAGATGACCTGGAACTTGTTGAGAGAATGCTGGATTTGATTAAGCCAGAGTTACAAAG CAAGCCTCAAAAGGAAGGTGCAGAATCTGAACAATTTTGGGATTTGTTAAGAGGAAAAACTGAATATCCCAGTCAAAAGA TTGCGAGGGACGCTGAAAATGATCCTCATCTATTTTCTTGCAACTACTCAGGAGGAAACTTGAAGGCGACAGAGATATAC AACTTTTCCCAGGATGATTTGATGACAGAAGATATTTTCGTCTTGGATTGTCACTCTGAAATCTTTGTGTGGGTTGGCCA GGAGGTTGACCCCAAGAGTAGAATGCAGGCTCTAACAATTGGTGAGAAATTTCTTGAGGGTGATTTTCTTCTAGAAAAAT TATCTCGTGTAGCTCCAATATATGTTGTCATGGAAGGTAGTGAGCCACCTTTCTTCACTCGCTTCTTTAAATGGGATTCT GCCAAATCTGCAATGCTGGGAAACTCATTTCAAAGAAAACTCACAATCGTGAAAAATGGGGGCACTCCACCTTTGGTTAA ACCCAAACGAAGAGCATCCGTATCTCTTGGTGGAAGGTCTAGTAGTGTACCAGATAAATCTCAGCGTTCCCGCAGCATGT CTGTTAGTCCTGATCGTGTTCGTGTGAGAGGAAGATCTCCAGCTTTTAATGCACTGGCAGCTAATTTCGAGAACACAAAT GCTAGGAACCTTTCAACTCCACCTCCAATTATTAGGAAATTGTACCCAAAATCTATGAGTCCAGATACAGCAAAACTGGG ACCTAAGTCTTCAGCCATAGCTAGCATTAGTTCTACTTTTGAACCACCTTCAGCACGAGAAAAATTGATTCCTCGGTCAC TTAAAGCGAGTTCAGGTGCCTCCAAATCAGACCCGGAGATAAGTGAAAAGGATGATTCTATGAGCAGCACAACAGAATCT CCTAATGTACAGGGAGATGTGAAAGAGGGTGAAGCTGAAGATGATGAAGGTCTCCCAGTTTACCCATATGAAAGTGTTAA CACAGATTCTACAGATCCTGCAACAGACATTGACGTCACTAAACGAGAGGCTTATCTGTCACCTGAGGAGTTTCAAAAGC ACTTAGGGATGACTAAGAAAGAATTTAACAAATTGCCAAAATGGAAACAGAACAAACTCAAAATGGCTGTTAATTTGTTT TGA
Protein sequence (LotjaGi4g1v0303900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSISVRDLDPAFKGAGQKAGLEIWRIENFNPVPIPQSSYGKFFNGDSYVILKTTASKSGALRHDLHYWLGKDTSQDEAGA AAIKTVELDAALGGRAVQYREVQGRETDKFLSYFKPCIIPQEGGAASGFKHVEAEEHKARLFVCKGKHVVHVKEVPAARS SLNHDDVFILDTESKIFQFNGSNSSIQERAKALEVVQFIKDTYHDGKCDVAAVEDGKLMADSEAGEFWGFFGGFAPLPRK TVSDDDKLPDSHPPKLLCVEKGKAEPIETDSLTKELLDTNKCYILDCGLEVFAWIGRNTPLDERKSASRAADELLSDTDR PKSQIIRVIEGFETVMFRSKFDSWPQTTNATMPEEGRGKVAALLKRQGLDVKGLVKADPVKEEPQPFIDCTGHLQVWRVN GQEKILLAANDQSKLYSGDCYIFQYSYPGEDREEYLIGTWIGKSSVEEERLSAISLASKMVESMKFIPSQARIYEGSEPI QFNAILQSFIVFKGGLSEGYKNYIAEKEIPDDTYSEDGVALFRIQGSGPDNMQAIQVEPVASSLNSSNCFILHDGSTVFT WSGSFTTSDDLELVERMLDLIKPELQSKPQKEGAESEQFWDLLRGKTEYPSQKIARDAENDPHLFSCNYSGGNLKATEIY NFSQDDLMTEDIFVLDCHSEIFVWVGQEVDPKSRMQALTIGEKFLEGDFLLEKLSRVAPIYVVMEGSEPPFFTRFFKWDS AKSAMLGNSFQRKLTIVKNGGTPPLVKPKRRASVSLGGRSSSVPDKSQRSRSMSVSPDRVRVRGRSPAFNALAANFENTN ARNLSTPPPIIRKLYPKSMSPDTAKLGPKSSAIASISSTFEPPSAREKLIPRSLKASSGASKSDPEISEKDDSMSSTTES PNVQGDVKEGEAEDDEGLPVYPYESVNTDSTDPATDIDVTKREAYLSPEEFQKHLGMTKKEFNKLPKWKQNKLKMAVNLF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 958 | 958 | 0.0 | ||
PANTHER | 1 | 958 | 958 | 0.0 | – | |
Gene3D | 6 | 131 | 126 | 3.0E-46 | ||
SUPERFAMILY | 9 | 147 | 139 | 3.27E-39 | – | |
CDD | 12 | 124 | 113 | 1.92874E-67 | – | |
SMART | 19 | 117 | 99 | 5.1E-28 | ||
Pfam | 28 | 111 | 84 | 1.7E-16 | ||
SUPERFAMILY | 129 | 244 | 116 | 8.72E-22 | – | |
Gene3D | 132 | 244 | 113 | 3.8E-33 | ||
SMART | 137 | 234 | 98 | 1.9E-26 | ||
CDD | 138 | 217 | 80 | 1.16621E-29 | – | |
Pfam | 150 | 216 | 67 | 7.4E-11 | ||
CDD | 254 | 343 | 90 | 4.8057E-32 | – | |
SMART | 254 | 344 | 91 | 1.0E-21 | ||
SUPERFAMILY | 254 | 427 | 174 | 3.14E-22 | ||
Gene3D | 257 | 354 | 98 | 3.6E-20 | ||
Pfam | 269 | 337 | 69 | 1.4E-9 | ||
PRINTS | 323 | 344 | 22 | 4.0E-42 | ||
SUPERFAMILY | 382 | 528 | 147 | 5.61E-28 | – | |
CDD | 386 | 482 | 97 | 1.63248E-38 | – | |
Gene3D | 387 | 519 | 133 | 4.6E-21 | ||
SMART | 392 | 489 | 98 | 6.4E-20 | ||
PRINTS | 411 | 427 | 17 | 4.0E-42 | ||
PRINTS | 436 | 454 | 19 | 4.0E-42 | ||
PRINTS | 469 | 489 | 21 | 4.0E-42 | ||
SUPERFAMILY | 511 | 613 | 103 | 2.16E-18 | – | |
CDD | 517 | 608 | 92 | 1.83078E-30 | – | |
SMART | 519 | 606 | 88 | 2.3E-14 | ||
Gene3D | 520 | 612 | 93 | 7.0E-19 | ||
PRINTS | 532 | 552 | 21 | 4.0E-42 | ||
PRINTS | 592 | 611 | 20 | 4.0E-42 | ||
SUPERFAMILY | 595 | 717 | 123 | 7.36E-24 | – | |
Gene3D | 613 | 735 | 123 | 1.0E-31 | ||
CDD | 621 | 720 | 100 | 3.06668E-39 | – | |
SMART | 622 | 719 | 98 | 4.3E-20 | ||
Pfam | 639 | 712 | 74 | 1.4E-8 | ||
PRINTS | 644 | 666 | 23 | 4.0E-42 | ||
PRINTS | 673 | 692 | 20 | 4.0E-42 | ||
MobiDBLite | 741 | 782 | 42 | - | – | |
MobiDBLite | 755 | 775 | 21 | - | – | |
MobiDBLite | 837 | 917 | 81 | - | – | |
SUPERFAMILY | 887 | 960 | 74 | 8.11E-23 | ||
ProSiteProfiles | 895 | 960 | 66 | 19.845 | ||
Gene3D | 896 | 960 | 65 | 2.7E-21 | ||
Pfam | 925 | 960 | 36 | 2.6E-16 | ||
SMART | 925 | 960 | 36 | 1.4E-16 | ||
Coils | 960 | 960 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Actin binding | Interacting selectively and non-covalently with monomeric or multimeric forms of actin, including actin filaments. | ||
Biological process | Cytoskeleton organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures. | ||
Molecular function | Actin filament binding | Interacting selectively and non-covalently with an actin filament, also known as F-actin, a helical filamentous polymer of globular G-actin subunits. |
Expression pattern of LotjaGi4g1v0303900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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