Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0310200 |
| Transcript ID | LotjaGi4g1v0310200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic; TAIR: AT4G29750.1 CRS1 / YhbY (CRM) domain-containing protein; Swiss-Prot: sp|A7XN92|CFM3_MAIZE CRM-domain containing factor CFM3, chloroplastic/mitochondrial; TrEMBL-Plants: tr|A0A0B2QCH4|A0A0B2QCH4_GLYSO Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic; Found in the gene: LotjaGi4g1v0310200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:68646907..68656505) extracted from Lotus japonicus Gifu genome v1.2.
CCCTAAACAAAATCTCTCCATGAAAACAAAGGGTAGAAGAAGAAACGTTCTTGTCCATTCCATTTCCAGTTTCACCATAA CCACCATGCCATGGCGCTTCAACCGCCAATTCCACTGTGTTCATGTCGCTCCTCCTCTCTGCAATTTCTCCTCTTCCAAC CTCAAACCCACTCCACTCTCAAATTCCGAGTTTCCTGTTCGAACCCGATAGCTCAAATTGAAACCCAACAATTGAAGCCT GTAACTCCAGAAGCACCCAAGAAGAAGAAGAAGAAGAACACCTCAAGACCTAGCTTCTTCGACCAAATTCAAGATAAATG GTCCAACAAATTGGGTTCCCAAACAGAGAAATTCCCATGGCAACGTGAACCAGAACAACAAGAGGAAGAAGAAGAAGAAG AGCATGCACAACAACAAGAGATTGACCAGTTTCAGAACAAGCCTTCACCACCTAGTTACAGTTTGGATTTTCAGTTTCCG AAGCGTTTATCTCCTTGGCTTCAAGCAGAAAATCCGCACAATCCACGTTTTGATTCTGAGTCTGATGCTTCTGAGGACGA GGACAGTGGCAAACCCTTACGAGAGAGTTTTGAGGGTGAGGTTTCGACCGCGGTGCGAGAATCAGAAGAAGGTTTGAGGG AAAGAGGGAGTGGAGTGAGGAAAAAGAGAAGCAATGCGGAGTTGGCGGAGAGGTTGATTCCTGAACATGAGTTGCGGAGG CTCAGGAAAATTGCATTGAGGATGATGGAGAGGTTTGAAGTTGGAGTGACCGGAATCACGCAGGAATTGGTTGCTTCCAT TCATCAAAAGTGGAGGGATAGTGAAGTGGTGAAGCTCAAGTTTGAAGCCCCTCTTGCTGCTAACATGAAAAGGGCTCATC AAATTCTAGAGGTCAGCATTAACACTCATTGTTTCTCTTCAATTTTGACCATGTAGTTAATTTGTCATCAAATTCAGAAT TCAAAGATGGAAATTGGAAATGCACCCTTCATATTCGATGAAATGATTGCTTTTATGACTTGTTTTATCATAGAACTTTT GAACTGGTGGAGTTTTTGTTTGTTTATTCATGACGATGTTTTCTTGCTTAATCAGAGTAAAACTGGAGGTATAGTGGTGT GGCGATCGGGTAGTTCCATAGTGTTGTATCGGGGAATGGCCTACAAGCTTCCCTGTGTGAAATTGTATTCGAAGATGTAT CAGGCTAAGGAGGAGGATGTTCATCAGTCAGTGCATGTTGGAAGTTGGAGTGATGCTCAACTAAGTGTGAAAGAACCAGT TAGAACAACTACAGAATTATTGACCAGGGACTCTGCAGAGTATTTGAAGGACATGACTGAAGAAGAATTTATGGAATTGA CTGACCTTAACCAATTGTTAGATGAGCTGGGCCCACGTTTCATAGATTGGACAGGCCGTGTGCCGTTGCCTGTTGATGCA GACCTTTTAGCTGCAGTGGTTCCAGGATATAAACCCCCATTCAGACTTCTTCCTTATGGGGTAAAGCATTGTTTAACTGA CAGGGAAATGACTGCCTTTCGTAGGCTTGCAAGAACAACGGCTCCACACTTTGCCCTTGGTATGCAATAAACTATCTGGT TACATTTATGTCCTGCAAATTTGTGTTTACAAATGATAATATCTGCTTACTGCTGCAGGAAGAAATAGAGAACTGCAAGG TCTAGCTAGAGCCATGGTAAAGCTGTGGGAAACAAGTGCTATTGCGAAAATAGTCATCAAACGAGGTGTTCCCCATACAT GTAACGAGAGGATGGCTGAAGAACTCAGGGTAAATCTACCCTTCTGCTTAGCTGTTGAGTCTAATGAGACCTTTATATCT TATAAATGAGAATTGTGGGGGTGTGGCTGGGGTTCCAAAGCCATTAAATTTCTGTCCAATGCACCAATTGAAGAGTGAAC ATAAAGAAAGAGGAAACAAAAAAATGAGGTTTGTCTTGTGTCATAAAGCGTATCTGCATTTCATTATTTTCATCCCAAAG TAGGAAAGTCAGACAACTACTTCATTTTCTGTGAAATGCTTCTTTTGTTTTTTATCTTTGTTGTTTGCTCTAGCAACAAC TGAGTTTAATGTTTCAGGGAGTTGCCAAAGTTTGACTATGCCGCCCAACTAATGAGTTGATAAAAATGCTAGGCACCGGT CATTTGACTACATAATTCATTCATAACCTTGATATCTTTTTCCAGATAGATAACCATATTTCGAATCATAAGACAAATAA CTTTGTTAACCTTCCCTCAACTGGGGTTATCAGTTGAAAGTTCATGTGTCTGCATTTTGTAGTTAATGCTCAAATTGCTT CTGTTATTTGTTTTCTTCATTTAAAAGTCAGATGATAAATAGCCGAACATGGGTGACTTTAATGGCATTTAAATGCATTT GTTTTGGTTTGGATCACTAATACAATGAAATTTGTGTTTTTTTTTTCATATCATTATAAGGGATAAAGTGCACCGAACCA TTCCAACTAAAATGCAAAACACCCCTTTGTTCAAAACCCAAATCCTTGGACTTACCAAACTGTGCATATTAGTGGTAAGT TTACACATCATGAACATGTAGAAAATCACCTAATAAGGACTAAGGAGTCAATGTACTTTACATGGTTTGGTAACATTTAA GGACTTGACTTATAATTTGTACCATAAGAGATTTGCTGCAAGTGACCTATAGTTGAAGGAGGTTTATTGCATACAAACCA TCATTGTTCTGCATTTTCTTATCGAGTTTTGGATCCTAGAAAAAAAAAACGCACGTACTTAATACCCTAAAGATGCCTGC ATTTTTTAATGCTCATGGCTTACACATTTTGGAGGCGTTACCACACTTGTTTAGTTTCATAAGATTGTTATGACTATTGG CACTTGACATTTATATGTTTTGACAGCTGTTCTGGTTCCTTATTTTCTGTGTTGCATATCAAAGTGAATAAACTGTTCCT TTCTTCTGACTTACGGTTGTTGCATTTCATGCATGCAGAAATTGACTGGGGGAACTGTACTCTCTAGAAATAAGGAATTT ATTGTATTTTACAGGGGCAATGACTTTTTGCCTCCTGCTGTCACCAATGTTCTGACTGAGAGACAGAAACTAACCCTCAT CCAACATGACGAGGAAGAGAAAGCGCGAGAAATTGCTTCATCTATTACAATACCAGATGGCAAAGCATCTCCAATGCCGT TATTGGCGGGCACGCTTGCTGAGACTAGGGCAGCAACCAACAATTGGGGGCACCAACCAAGTAAACAAGAAGTTGAGAAA ATGACGAGAGATTCTGCCTTGAATAGACTTTCTTCTATAATAAAAAATCATGAGATTAAACTAGCTATGGTAAGTTACAT AGGAATCAAGTGAAATTACTTCCCAGAAATTATTTGTTGTCAACACATCTATCTAACTTTTTATGGTCATAGACAAAAGG GAAGTACAGGAAGGCTGATAAGGATTTAGCGAAATTGCAAGGTGATCTGGACCCAGCAGACCTTCCTAGTGATCTGGAAA CATTAACTAATGAAGAGAGATTTTTATATAGGAAGATGGGTCTGAGTATGAAGCCATACTTAGTTCTAGGTAAGGACAAC AACCAATTTATTATAGCTTTATGAGTAGCTGCTTTTGTCTAGGGCTTAATGACTCATACAACAAATTTAGAAGTATGAGA TTTTTATTTCAGGGAGGCGAGATGTTTATGCTGGCACCATAGAGAACATGCATCTACACTGGAAATATCGTGAATTGGTA AAGATAAATGTAAAAGGGAGAAATTTAGCCCAAGTTAAGCAAATTGCAATAGCTTTGGAAGCTGAGAGTGGTGGGGTACT AGTATCTGTAGATAAGGATACCAAAGGCTATATAGTTATTGTTTATCGTGGGAAGAACTATTTCCGTCCGCGTGTTCTTA GACCCAAAAGCTTGTTGACACGAAGACAGGCATTGGCTCGATCTATTGTGCTTCAAAGACGTGAGGTAATTAAGCAATGG CTTATGGTTATCTGAGATCTTGTTATTTTATCTCATGAAGTTTCTAACTTTTTCCAGGCACTGAAAGACCATATGTTAGA CTTAGAGGAGCTAATTGGGTTGCTGAAATCTGAGCTAGTATGATGCTTTGCCTCTTCTATATGATTCTATTGGTAATTAT GTTGGATAGTTTATAAATCTATTTGTAAGTTTTGTTCTTGATTTCAGGAGGATATGAAGAATGAAAAGGAGATTGATGGT GACAAAACTCTCTACTCATCAACACAGAGTTACCCTGTTTCTTCAGATGATGAATGGGAAGAGGTAAATACTTTCTTTCT GTAGGAAAATACCAAATGCTTGCAGTTTAAATGGCATCTTTGCCAATAATATACAGCTAACAACTTCAAAAGTACTCTCA GGAAGTGATCATCTACAATAATCTTCTTTTTGTCGGTTAGAAATATAAAACATTCATGTGTCCTTACCCAACAACTTAAT CTTTTGGAATAATTGGTTCTTGAGCCTTTTTGACCAAGTGATCTAGAGTTTGATCCTTGTTGCCTCCGGTTATTCTAATA AAAAAAATTGAATTTCAGCACAAGGTAGATGAGCTCTACATTGTCCATGCTTCAAGCCAAAGTTGGTTTTTGCCTATGAG AGCGTGTTAGAAATATAAAAAAATCATTCATGTGTCATTTACCTCACAGCTTAAGCTTTTGGGATAATTGGTTCTTGACA TTTTCCTCTCATTTCTCTGCCCTATTATTTTCTTTGGTGAACTAGAATGAAGGGAGCGAGATTTATTTTGACAAAGCTGA AAGTGGCGATGAGGATGAGTAACATCACAACAAGCTACTTGATTTGGTAGAGTAATGTATTGGAATATCTGCGGAGGTTG AGCAGCTGAATGTTGAGCTTGAGGAGCTGATCCAAGAAGATCATGCACAAAAACTTGAGCCTTGCTTATTATTGTCACTT CCCTTGTTTATAGAAGGGGAATTTTATCCTACCTCCAAGTTGTAGGAATACCCGCAAGTGATGTAACATGTGAAATGGTT AAATCAGTTGGTTGAATGATTAACTGCTGCTTGAGTTTGACAAATGGTTCGAATAAGTGTTCAATCTATCGCTTGGGATA AGGTAGAGCGACTTGTCCAATCGGTTTTGTTTTCTTATGTCCTTGCATCATGTTGCTGTAAAGATTTTTTAAATTAATGG TAACATACTGTATTTTGACCATCAGACATGGTTAGGATCAGTATTTTCCAAAGCAGTGCAATGGTGTCATCTTCAATATT CAATTCGATACAGGAATAGTTATATGGTAAAAAAAAATCTCTTTTGCACTGCCATGAGATCAATATCATAGACTCAAAAT AACTTTGCACATCAGATTTGGGGCAAATAACACTGGCAGATATATTACTGCATCCTCAAGTGTGCACTAGACCACATTTA CCTTTTGCTGTCTTCTGGGTAGGTTCTGTTCAAACTCGGAACGTGTTCATTGGGTTGTTGGACTTGCAAAAGGCAAATGA GTATATGATTGTTTACCGAAGATTTGATGACTTAGATCTGTTGCCTTACTGTTTTATGAAACAGTTTTTTGTTACTATAA ACAGGAAAAGAAAAAACTCGTTCGATATGAACAGTTTCAAAATTGTTCTTACAAAACAGTTCAATTTTCAGTTTTTAAAA TTGAAATTTCATTGTATAACACATTGTGACCCCAAAAAAAGAACTCAAAATGGACCTAATTAACAAATGGGTCCAAAGGG AAATATTCAAGTCATACATTCAACTCATTATAATAAAATAAAAATAAATCAATCACTTGAAGGCCAAATAAAATTCTAGC AGAAATTGGTATCGCCATGATTTTCTCCCTATTAAGCAACTCACTAATTTAATGAGCAAAACATATACGAGCTCAAACAT GTTGAACATCATAGGCAGGTTATTCCATTAGAATATATCATCAGTAGCAAATTCTGTTGACTCGAAACTGCACCTCTATC AATTACATGATTAGAAAAATCAAATCTCAAACAAAAAAAATAAGTTCATATCCTGCAAGCAAAGAAAGACAGACATCTAG GACTCCTGGTGCAAGTTTTCTTTTATGAAGTTCACAACAACCGAGGCTAGCTCATCTTGGTGATTAGTGTATGAATGATC AGCTCCTTCTATGACATGTAATTTGTGGTTAGGTACAATCTTGGCAAACTCAAGTGCATCTTCAACAGGGATAACTGTGT CTGAAGAACCATGAACTGTAAGCACCCTGTCGTACATAATGTGATTTGAGATTAGAACTTCTATACGAGATGGTGGTGAT TTCAGAGTTATATGAGGACAGTTTTTTGCAGTATCACCATCCTAACTTCATCATCTCTCGTACAGATTTATTCTTCTTCA AATAACTGCACTATAAGCTAAAGCAAGTCTTGTTCCTAAATTAAAAACCATACATAAAAATGCAAAAAAAAAATACCCTA CTTGATTAGGGAGAAAATCAAAATTACACCATTTTAATTTACAAGTAAATATTTAATCTGCGAATTTCCCTAGTTTTCAA AAGTTATAAAATTGGCAGGGGGAGTTCCATTTAGCAAATACCAATTCCGGAATTTATACAACATCAAATATTGCTGATTT TGTATGTTTGACTTGGATGGTGATGGATTTTCTTCTGATTCTCCAGAACCTTCTTCTTCATTGCATGTTCATTACTTACA AAATTTATTTCATTCTTATTTAATTCTCAACCAAACTTGAAACTCTTAAAATGAGTATGTACGTTTGAAGAATTTGGAAT TATTGGCCCTACACACACATTATCCTAACTTTCATTGCTTCTGCTTTACAGAAACACTGCAAATTCAACACGTATAATTA ATCAACAAAAAGATGCAAAAAAAGGGGCTGTGATGCCAAAGAGACCAAGAGGGTGAAGCAAGAGACCAGTAAAAAATTCC CTCACCTGCAATCTTTATCAATCTGAAGGCATGCTTCATGCATATTTGTATTTAATCGGTCCATCAAACTATCTTCAGTC ACACGGAAAATAAAACTTCCTGCAACAGTTCATGTCCTCAAAGGGTCATACAATAACAAAATAAATTTGTGCATCTGTTA GACAGTCAGAAACTGAGAATGACATATCATGTGCCATCTATAATGTTTTCCTACCAATTTTCAAGTATTGAATACATTTG TTAATAATTATTGCATAGATTTTTCATTTTCCCGTCTTTTGTCTTTCCTCTATGGCCCGTTCTGTTAACAGACATTTAAG AGAATGCACCAGCACCATGGTATCATAAGAGTAAAAAAGTTTCAGCTTATATGATATAATAATCCCCAATTCCAAATTTT AGTTTAAAGTAAACTGTAAAAGTAAAATAAGCCATGGTTTTGGACTTACTGATTTGAGAAAATACACAAACAGTAAGTTC AAAGTAGAAAACAAGTGATCTTTAATCAATAGACACTGCATTTGTTCAATTATCTCTTACAACATGCTCCTGCACTAAGG AATTGAAACTTGTGTCCGATTAAATGATAAGTTACCTAATCTCTTCACATCAATGAAACCATCCTTTCTAATTCTTTCCA TAAAATCTTTTCCAAGCCGTTCTTCAATTCCTGTCTTCAGATCATAACGTCCAGAGATGTTGACAACTGTTTTAATGTCA TGATATTTTGAAGCATAAAGAAGCACCACGCCACCTCCTACATCACGATACAGTTACAATTATTAATAGTTCAATTATGC ATACAAACTTCAAAAAAAAAATTGAGAGAAGCCATTTGAGAAGATGTATCTGTCAAAGTTTCACTAATAAGTCAGATTTC ACGGATTACAAAGGAAAATAAATGACCACCCACATAGAGTAGGGGTTTATGAATTTTCACCAAACCTATATAATACCTAT TTTAGAAAATTACTTCGCCTCAACACCATGTTAAAATGAAAAGACTAACCAAGTTCCTGTGTATCAGGTTTTTGCTGAGA AGCTCAGAAATATAAGCTCAGCAGCAAGTACCAACTAAGACGAAAGTAGATCCTGGTTTTATTTCAGAAATAACACAACT CTTTTCATACAAAATCACTCAAAGTTTCTATCTTCACAACAAAACCATCACGAAATAACTTAAACAAGAATAATTATCAT AATGCCATCAATTATATAATGGAATATAATTGAATAGTCATTATAAGACTCAGCACAAATATCCTAAATGCTATCTTGAC ATATCTTTTTCATCATTTTCTTGTTGGCAGAAACACTTGCCGATAAGGAGAACAAGTCAATATACCTTTACTATGCCCAA CAACTGCACTAACTACACGGTTTGCTTCATTGAAATGTTGAGTTACAGCATGTAAATCCTCAGCCTCCCTCCAATAGTAG CCATATTGAAATGTACCATCACTTTCCCTAAAATAAAGTGAAGCAAGACTAATGATCCATAACTTTTGTAATGTTTTAGT GATCATATTATTCCATCCAGTTTTCATATGCAATCACAAAGTAATAGTTTATAGTAAAGCTATAATTAGCGCATACAACT TCAATCAACATAAAACTTTAAATACTATAAAAAAAAAAAACTTGGTCTTGTGTACATAATCTTCTTCTTGCTGCTATTGT CAACTTATTCTAGTAAGCCACCAAGCACAAAAGTTACAATTCTATAAGTTGTTTCAAAGCAGAACATTAGAAGAATACAA AGTATCAATGTATCATATAACTATTTTTTTCTATTACCTATCACCTATAGCATGATGTTAATCCAGTTTCACAATACCTA CTGTATCAACCAAGAGCCACTTGTTGCATATGTTCATGATTCAAGGTTAAAGTCAAATTTTATGATTACCCATTTCCAGA AAAGTCAAAGCGGAAAGAACTGATTCTGGCATTTCCCAATGCACCAGCAAGGTTCACTAAGGAATCAGATTCCTGAAAAT AAGAAAATTGAAGCAATGAAAACAACTGGGGTAAAAAGAATATGAAGCTTAACATAGGAAGAAAGTAGAAACTAACTTTG GAGGACCGAAATCCATGGCACAAGATTACAATTTCCTTGGATCCAGAATCATGCAATATACCGACTAGCTTTTCACCGTG CTTGTTGGGTATTATGAGTCTCTGTTGCTCAACACCTGGGATTTGTGCAGCTAGAGCCATGTTGAATTTGAAGGTTCTGG GTTTGTGATTGGATGGGATGGAAAAACGAACCTGGTAATGGGAAAATTTAGACAAAGAAGGTGTTAGAGAAAGTGAGGAA TAAGCATTTTGCAGAAGGGTATCCATTGGGATTGACCAATGATCAGAATATGAAGATGATGATGATGATGATGATGATGA TGATGAGTTCACTTACACAAACGTTAAACAGAACAAACACTTGTGTAATTGTGTTGTTGTTTTGTCAGCTACTCAATTCT CACTCAGTAGTGTGTGGACGAGTGAAACATGTTCGTTTTGTGCTATTTGAAACTGCTAGCTTTGCCTGCTTTGGATTTAG TTTCACCCTAATCTTGTTTCAAAAGAAAATTAGTGGAGGAATATAAGAAGCTAGCTAAAAAGCTTATAAGTGCTCAAAG
CDS sequence (LotjaGi4g1v0310200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGCTTCAACCGCCAATTCCACTGTGTTCATGTCGCTCCTCCTCTCTGCAATTTCTCCTCTTCCAACCTCAAACCCA CTCCACTCTCAAATTCCGAGTTTCCTGTTCGAACCCGATAGCTCAAATTGAAACCCAACAATTGAAGCCTGTAACTCCAG AAGCACCCAAGAAGAAGAAGAAGAAGAACACCTCAAGACCTAGCTTCTTCGACCAAATTCAAGATAAATGGTCCAACAAA TTGGGTTCCCAAACAGAGAAATTCCCATGGCAACGTGAACCAGAACAACAAGAGGAAGAAGAAGAAGAAGAGCATGCACA ACAACAAGAGATTGACCAGTTTCAGAACAAGCCTTCACCACCTAGTTACAGTTTGGATTTTCAGTTTCCGAAGCGTTTAT CTCCTTGGCTTCAAGCAGAAAATCCGCACAATCCACGTTTTGATTCTGAGTCTGATGCTTCTGAGGACGAGGACAGTGGC AAACCCTTACGAGAGAGTTTTGAGGGTGAGGTTTCGACCGCGGTGCGAGAATCAGAAGAAGGTTTGAGGGAAAGAGGGAG TGGAGTGAGGAAAAAGAGAAGCAATGCGGAGTTGGCGGAGAGGTTGATTCCTGAACATGAGTTGCGGAGGCTCAGGAAAA TTGCATTGAGGATGATGGAGAGGTTTGAAGTTGGAGTGACCGGAATCACGCAGGAATTGGTTGCTTCCATTCATCAAAAG TGGAGGGATAGTGAAGTGGTGAAGCTCAAGTTTGAAGCCCCTCTTGCTGCTAACATGAAAAGGGCTCATCAAATTCTAGA GAGTAAAACTGGAGGTATAGTGGTGTGGCGATCGGGTAGTTCCATAGTGTTGTATCGGGGAATGGCCTACAAGCTTCCCT GTGTGAAATTGTATTCGAAGATGTATCAGGCTAAGGAGGAGGATGTTCATCAGTCAGTGCATGTTGGAAGTTGGAGTGAT GCTCAACTAAGTGTGAAAGAACCAGTTAGAACAACTACAGAATTATTGACCAGGGACTCTGCAGAGTATTTGAAGGACAT GACTGAAGAAGAATTTATGGAATTGACTGACCTTAACCAATTGTTAGATGAGCTGGGCCCACGTTTCATAGATTGGACAG GCCGTGTGCCGTTGCCTGTTGATGCAGACCTTTTAGCTGCAGTGGTTCCAGGATATAAACCCCCATTCAGACTTCTTCCT TATGGGGTAAAGCATTGTTTAACTGACAGGGAAATGACTGCCTTTCGTAGGCTTGCAAGAACAACGGCTCCACACTTTGC CCTTGGAAGAAATAGAGAACTGCAAGGTCTAGCTAGAGCCATGGTAAAGCTGTGGGAAACAAGTGCTATTGCGAAAATAG TCATCAAACGAGGTGTTCCCCATACATGTAACGAGAGGATGGCTGAAGAACTCAGGAAATTGACTGGGGGAACTGTACTC TCTAGAAATAAGGAATTTATTGTATTTTACAGGGGCAATGACTTTTTGCCTCCTGCTGTCACCAATGTTCTGACTGAGAG ACAGAAACTAACCCTCATCCAACATGACGAGGAAGAGAAAGCGCGAGAAATTGCTTCATCTATTACAATACCAGATGGCA AAGCATCTCCAATGCCGTTATTGGCGGGCACGCTTGCTGAGACTAGGGCAGCAACCAACAATTGGGGGCACCAACCAAGT AAACAAGAAGTTGAGAAAATGACGAGAGATTCTGCCTTGAATAGACTTTCTTCTATAATAAAAAATCATGAGATTAAACT AGCTATGACAAAAGGGAAGTACAGGAAGGCTGATAAGGATTTAGCGAAATTGCAAGGTGATCTGGACCCAGCAGACCTTC CTAGTGATCTGGAAACATTAACTAATGAAGAGAGATTTTTATATAGGAAGATGGGTCTGAGTATGAAGCCATACTTAGTT CTAGGGAGGCGAGATGTTTATGCTGGCACCATAGAGAACATGCATCTACACTGGAAATATCGTGAATTGGTAAAGATAAA TGTAAAAGGGAGAAATTTAGCCCAAGTTAAGCAAATTGCAATAGCTTTGGAAGCTGAGAGTGGTGGGGTACTAGTATCTG TAGATAAGGATACCAAAGGCTATATAGTTATTGTTTATCGTGGGAAGAACTATTTCCGTCCGCGTGTTCTTAGACCCAAA AGCTTGTTGACACGAAGACAGGCATTGGCTCGATCTATTGTGCTTCAAAGACGTGAGGCACTGAAAGACCATATGTTAGA CTTAGAGGAGCTAATTGGGTTGCTGAAATCTGAGCTAGAGGATATGAAGAATGAAAAGGAGATTGATGGTGACAAAACTC TCTACTCATCAACACAGAGTTACCCTGTTTCTTCAGATGATGAATGGGAAGAGAATGAAGGGAGCGAGATTTATTTTGAC AAAGCTGAAAGTGGCGATGAGGATGAGTAA
Protein sequence (LotjaGi4g1v0310200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALQPPIPLCSCRSSSLQFLLFQPQTHSTLKFRVSCSNPIAQIETQQLKPVTPEAPKKKKKKNTSRPSFFDQIQDKWSNK LGSQTEKFPWQREPEQQEEEEEEEHAQQQEIDQFQNKPSPPSYSLDFQFPKRLSPWLQAENPHNPRFDSESDASEDEDSG KPLRESFEGEVSTAVRESEEGLRERGSGVRKKRSNAELAERLIPEHELRRLRKIALRMMERFEVGVTGITQELVASIHQK WRDSEVVKLKFEAPLAANMKRAHQILESKTGGIVVWRSGSSIVLYRGMAYKLPCVKLYSKMYQAKEEDVHQSVHVGSWSD AQLSVKEPVRTTTELLTRDSAEYLKDMTEEEFMELTDLNQLLDELGPRFIDWTGRVPLPVDADLLAAVVPGYKPPFRLLP YGVKHCLTDREMTAFRRLARTTAPHFALGRNRELQGLARAMVKLWETSAIAKIVIKRGVPHTCNERMAEELRKLTGGTVL SRNKEFIVFYRGNDFLPPAVTNVLTERQKLTLIQHDEEEKAREIASSITIPDGKASPMPLLAGTLAETRAATNNWGHQPS KQEVEKMTRDSALNRLSSIIKNHEIKLAMTKGKYRKADKDLAKLQGDLDPADLPSDLETLTNEERFLYRKMGLSMKPYLV LGRRDVYAGTIENMHLHWKYRELVKINVKGRNLAQVKQIAIALEAESGGVLVSVDKDTKGYIVIVYRGKNYFRPRVLRPK SLLTRRQALARSIVLQRREALKDHMLDLEELIGLLKSELEDMKNEKEIDGDKTLYSSTQSYPVSSDDEWEENEGSEIYFD KAESGDEDE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 13 | 159 | 147 | 0.0 | – | |
| PANTHER | 13 | 159 | 147 | 0.0 | – | |
| MobiDBLite | 47 | 194 | 148 | - | – | |
| MobiDBLite | 67 | 90 | 24 | - | – | |
| Coils | 97 | 117 | 21 | - | – | |
| MobiDBLite | 145 | 194 | 50 | - | – | |
| PANTHER | 187 | 803 | 617 | 0.0 | – | |
| PANTHER | 187 | 803 | 617 | 0.0 | – | |
| ProSiteProfiles | 201 | 297 | 97 | 18.851 | ||
| Gene3D | 203 | 300 | 98 | 2.2E-11 | ||
| SUPERFAMILY | 203 | 291 | 89 | 7.32E-21 | ||
| SMART | 203 | 286 | 84 | 5.8E-17 | ||
| Pfam | 204 | 286 | 83 | 3.3E-30 | ||
| ProSiteProfiles | 405 | 502 | 98 | 16.598 | ||
| SUPERFAMILY | 406 | 501 | 96 | 3.4E-19 | ||
| SMART | 407 | 491 | 85 | 2.1E-11 | ||
| Pfam | 407 | 491 | 85 | 3.4E-13 | ||
| ProSiteProfiles | 618 | 718 | 101 | 19.239 | ||
| Gene3D | 619 | 720 | 102 | 2.9E-7 | ||
| SUPERFAMILY | 619 | 717 | 99 | 8.24E-24 | ||
| SMART | 620 | 707 | 88 | 2.4E-22 | ||
| Pfam | 620 | 707 | 88 | 5.9E-17 | ||
| Coils | 745 | 765 | 21 | - | – | |
| MobiDBLite | 766 | 809 | 44 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | RNA binding | Interacting selectively and non-covalently with an RNA molecule or a portion thereof. |
Expression pattern of LotjaGi4g1v0310200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…