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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0357800 |
| Transcript ID | LotjaGi4g1v0357800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cytochrome B561 family protein; TAIR: AT1G14730.1 Cytochrome b561/ferric reductase transmembrane protein family; Swiss-Prot: sp|Q67ZF6|ACFR3_ARATH Probable transmembrane ascorbate ferrireductase 3; TrEMBL-Plants: tr|I3S4N6|I3S4N6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0357800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:73653509..73655492) extracted from Lotus japonicus Gifu genome v1.2.
CAAAAAGAACACATAAAATATATGTAAAAGATAGAAACAGAACCATTTTACATGAGAATATATACTTTAGATACAGCTAG AGTAGGCTCATTTTGGGATGAAGATGCTTTCTAAAGCCCAAAGTTTCTTCTTCATTCAAAATACCAAACCCAAAACATCA AGCAATTCCATCTTTTATGAACTTTATCAAAAGGAAAACTCTATAAGACTGAACCATACCAGAATAACACCATGTCAGAA GTAGCAATTCTTTTTGTCATATAACAAATTCACTCAGTGTCTCTTACTTGTTCCATCAACATGCGTTCTTACAGTACCAC AATTTTGGCACACTTGTTTGGCATTCTTGCCATCATCCTCTTGCTTGTTTGGTTGCTGCATTACCGCGAGGGAATTGAAT ATGATTCTGACAATCCACTTCGCGTTTTCAATGTAACTCTCTTAGTCTCTTGTGTGTTTTTCTTCATTATTTATACAAAA GAACTACATTAATCTTATCTACTTCATCTGAGCCTTTCTTCACCATAAATTGTGCCTTGCAGGTTCACCCTTTTATGATG TTCTTCGGTTTCATCTTCCTTGTTGGTCAAGGTATGTATATCTTACTCTCTATGATGCCCCTTTTGGTTTAGAGCTATAT CTCATTAATTATTGTGTTTTATCTACCATCATCTAGACAAAATTGTAAATTTATCAATCCAATATACCTACACAAGATGA ATTGAACAACTTCTAAGTTTTGTGTGATATTTAAATAAGCATTTAAAGTATAAGTTTGTGCACTGATTTGGTTGATGTTG AATTTGAGCAGCAATACTGTCATACCAAACTGTACCAGCACCACATCAAACACAGAAGGTGGTTCACATGACACTTCATT TCATTGCTCTAATTCTTGGGATTGTTGGCATTTGTGCTGTTTTCAAGTTCCATGATATGGTGAACTTGGAGGATGTTTAC AGTCTCCATTCTTGGATTGGCCTTGGCACCTTTTGCTTGTTTGGCTTGCAGGTAAAAATCTATCCCAATAATATGCCCAT GATCTTAAAAATATCAATAGAAATATCCATGTCGTAAGACCTCATTTGGAAATGTTTATCCTATAATATAAACACTTACT TAAGTTTATGGGAAAACTTGCATAAATAGTTTATGAATTGCTTATATGTTTTGAATTTTTTTTTTTAATCTTCGGGGCTT AAAGTCCAAGCTACTCCCTGACCTGAATTAAATTTATTTTCTTAAGTTGTTCAACTAATTTATGAGTAAACGCTTACACT TACCTATTACATGTTTTAAGTTTATTTCAATAGATTTATGAATAATTGCTTATGCGATTATGAAACTTTTTCTCTTTAAT TACACTGTTTACCTAAACAAATATATGTATGTGCTTCAATTGCAGTGGCTTTTTGGACTGCTGTTTATGCTTCCAGCATC TCCTCAAACAAGATCCGCGGTGGCTCCATGGCACAGAGCTGGTGGCAGAGCACTATTTTCCATGGCAATCGTTGCTGCAT TAACAGGCTTGATGGAGAAGTCCACTGTGTTGAAACTGGCGCCTCACCAGAGAGAATCTCATTTGATTAACTTCACGGGT CTAGCAATTCTCTTGTTTGGAGTTTTTGTGGAACTATCAGTTGGATTGGTTTGACTCACTTTGGGTGTATTGCATTGCTC CAATCCATATACATGATTCATCATCACAAATTGTATTGGTCTTACATTTCTTTCTTTATTTCTTAATTTCTATGTGGATC TTGTAATTCTCTTGTTAAATAACTGGAAATGGCTTGTATAATTTCTTTTTCTTGATTTCTTTTTGACTCACGTGGGATGT AAGTTGATTTATTGAGGTGGTTTGTTTATATACCAAATATTAAGTTGATTCAATGTTATCTTATGTGTGTTTTGTATAAA TGTTGAGTGAATGTAAATGAGCATTTGCCTAATCCAACTTTTCACATTTGTTGGCTTTTATACC
CDS sequence (LotjaGi4g1v0357800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCGTTCTTACAGTACCACAATTTTGGCACACTTGTTTGGCATTCTTGCCATCATCCTCTTGCTTGTTTGGTTGCTGCA TTACCGCGAGGGAATTGAATATGATTCTGACAATCCACTTCGCGTTTTCAATGTTCACCCTTTTATGATGTTCTTCGGTT TCATCTTCCTTGTTGGTCAAGCAATACTGTCATACCAAACTGTACCAGCACCACATCAAACACAGAAGGTGGTTCACATG ACACTTCATTTCATTGCTCTAATTCTTGGGATTGTTGGCATTTGTGCTGTTTTCAAGTTCCATGATATGGTGAACTTGGA GGATGTTTACAGTCTCCATTCTTGGATTGGCCTTGGCACCTTTTGCTTGTTTGGCTTGCAGTGGCTTTTTGGACTGCTGT TTATGCTTCCAGCATCTCCTCAAACAAGATCCGCGGTGGCTCCATGGCACAGAGCTGGTGGCAGAGCACTATTTTCCATG GCAATCGTTGCTGCATTAACAGGCTTGATGGAGAAGTCCACTGTGTTGAAACTGGCGCCTCACCAGAGAGAATCTCATTT GATTAACTTCACGGGTCTAGCAATTCTCTTGTTTGGAGTTTTTGTGGAACTATCAGTTGGATTGGTTTGA
Protein sequence (LotjaGi4g1v0357800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRSYSTTILAHLFGILAIILLLVWLLHYREGIEYDSDNPLRVFNVHPFMMFFGFIFLVGQAILSYQTVPAPHQTQKVVHM TLHFIALILGIVGICAVFKFHDMVNLEDVYSLHSWIGLGTFCLFGLQWLFGLLFMLPASPQTRSAVAPWHRAGGRALFSM AIVAALTGLMEKSTVLKLAPHQRESHLINFTGLAILLFGVFVELSVGLV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 208 | 208 | 1.2E-72 | – | |
| Phobius | 1 | 6 | 6 | - | – | |
| PANTHER | 3 | 208 | 206 | 6.3E-108 | ||
| PANTHER | 3 | 208 | 206 | 6.3E-108 | – | |
| Phobius | 7 | 28 | 22 | - | – | |
| TMHMM | 7 | 28 | 22 | - | – | |
| ProSiteProfiles | 9 | 207 | 199 | 40.904 | ||
| Phobius | 29 | 47 | 19 | - | – | |
| CDD | 36 | 177 | 142 | 1.66734E-68 | – | |
| TMHMM | 43 | 65 | 23 | - | – | |
| SMART | 45 | 169 | 125 | 1.6E-46 | ||
| Pfam | 45 | 174 | 130 | 3.4E-38 | ||
| Phobius | 48 | 65 | 18 | - | – | |
| Phobius | 66 | 76 | 11 | - | – | |
| Phobius | 77 | 100 | 24 | - | – | |
| TMHMM | 78 | 100 | 23 | - | – | |
| Phobius | 101 | 111 | 11 | - | – | |
| Phobius | 112 | 136 | 25 | - | – | |
| TMHMM | 115 | 137 | 23 | - | – | |
| Phobius | 137 | 155 | 19 | - | – | |
| TMHMM | 149 | 171 | 23 | - | – | |
| Phobius | 156 | 175 | 20 | - | – | |
| Phobius | 176 | 186 | 11 | - | – | |
| TMHMM | 186 | 208 | 23 | - | – | |
| Phobius | 187 | 208 | 22 | - | – | |
| Phobius | 209 | 209 | 1 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. |
Expression pattern of LotjaGi4g1v0357800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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