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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0368800 |
| Transcript ID | LotjaGi4g1v0368800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peptidylprolyl isomerase; TAIR: AT5G48570.1 FKBP-type peptidyl-prolyl cis-trans isomerase family protein; Swiss-Prot: sp|Q9FJL3|FKB65_ARATH Peptidyl-prolyl cis-trans isomerase FKBP65; TrEMBL-Plants: tr|A0A072TTW4|A0A072TTW4_MEDTR Peptidylprolyl isomerase; Found in the gene: LotjaGi4g1v0368800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:74849166..74852749) extracted from Lotus japonicus Gifu genome v1.2.
AAAATATTGATAACTGAATATAGTGATTCTGGAACCCTCTTGAAATCTTTGGATTACCGAACTCTCTAGATTCACACACT CCTTCTTCAACTATATATACATTTCACACGCACGCACGCACGCGTTTCTCACATTTCTCTGTACGTAACTGAATCGTAAA CTCTGAGCTCTCTCTCTGTTAACAGCATTTTTGGTTTCTTGAATCGCCATGGATGATGATTTCGAGTTCCCAGCTGCCGG CAACATGGGAATGGAGGTGGAGGAGGATGAGGTGGTAAGCCCGGTGCTCAAGGTTGGTGAAGAGAAGGAGATTGGTAAGG GCGGGTTGAAGAAGAAGCTTGTTAAAGAAGGTCAAGGTTGGGACAATCCTAACGCTGGTGATCAAGTTGAAGGTAATCAA ATCCATTCCAATCATCATCATGTTCTCTTGTTTCTTCATTCTTGATGAATCAATGGAGTAATGTTGATTTATTGTGTTTC TGATTTGTTCTTGCAGTGCATTATACTGGAACCTTGCTCGATGGTACCAAATTTGATTCTAGCCGTGACAGGGGTACACC TTTCAAATTCAAGCTTGGCCAAGGTACACTCATCATTCATATACACATAAATTTCTGTGAAATCATATACATTCAATCTT TCAAAATCAAATAGAAATGCTAAGATCATGTTAAGATAGTAGTTTTTTTTGAGAATGCAATAGGATTTCTTGTTCAAATT ATCTACAAGAAGTTGAAATAGAGTGAATGCTATGTTCATTTGGTATTTGGTTTGATTTCATCACTGAGATTGAGTTAATC ACTAGATTTGTTTTTGGGTAATATAGGGCAAGTGATCAAGGGATGGGATGAAGGTATCAAGACCATGAAGAAGGGTGAGA ATGCTATTTTCACCATACCCCCAGAATTGGCTTATGGAGAGTCCGGATCTCCACCCACCATTCCACCAAATGCAACTCTT CAGTTTGATGTGGAGTTGCTGTCTTGGACAAGTGTGAAGGACATTACCAAGGATGGAGGAATCTTGAAGAACATTGTTAC TGAAGGGGAGAAATGGGATAATCCTAAGGATTTGGATGAAGTGTTTGGTACCTAACTCAATCCATTACCCTCTTTGAGAT TCACCTGTTCAGTAAATTTGATCATCATTGTCTTAAAGCTTCTTTCGCTTTCACTTTTCTGCAGTTAAGTATGAAGCTCG GCTTGAAGATGGGACAGTCATTTCTAAATCTGATGGAGTGCAATTCACTGTGGAAAAGGGTCAGTTTCACGCTTTCAGCA TTTGAATCTTGTCCATGTAATGATGTTTGAATTTTGATTGAGAGTAACCAAAGCTTGATGTTTTCTATTATAGGATTTTT GTGCCCTGCTTTGGCCAAGGCTGTGAAAACAATGAAGAAGGGAGAAAAAGTTCTCTTGAATGTGAAGCCACAATGTGAGT TTGGAAATCCTTCCACAATCGATTTTAAACTCAAAATCAATTTTATGGGGGGGGTTTTGTGTGTAGCTTCTAGTTGTCAG AATTGACATAGGAAAGAAAAGCTGATGTGAACATGTTATAAGTTTATTGATATTTTTGAGTTTTGCAGATGCATTTGGTG AGAGTGGAAGGCCAGCATCTGGAAATGAAGGAGGTGTGCCTCCAAATGCTTCGCTCCAAGTAGATCTTGAGTTAGTCTCA TGGAAGGCCGTGTCTGACATTACCAAAGACAGGAAGGTTCTTAAGAAGACTTTGAAGGAAGGAGAGGGATATGAACGACC AAATGATGGAGCTGTAGTTCAAGGTACAGTTTTGCAGGAATGTTACTTGTAAAAGCTTTTCAAAGAAGAATTTTGCTTTC TTCGTTTCATGTTTTATATATTGGATGAATATTGAAGGAAACCAATATCTGCACTGTTTCAGTGAAACTTGTTGGCAAGC TGCAAGATGGGACTGTTTTCCTTAAGAGGGGCTATGATGATGAACAGCCATTTGAGTTCAAAATTGATGAAGGTACTACC ATGCTTCTGAAATTCTTGAATCTGAAGTGAAGTGAGGGCTATTACTGTAACCTTTCTTCCCTTGTTTAGAATTCTAAATA ATTCTAAGTTGTATCTTGGGTGTACCGTGTAGAGCAAGTAATTGATGGACTTGATAGAGCTGTGAAGAACATGAAGAAAG GTGAAATTGCATTGGTGATCATTCAGCCTGAGTATGCTTTTGGTCCATCTGGGTCATCTCAGGAATTGGCTGCTGTTCCT CCCAATTCCACTGTGTATTATGAAGTTGAGCTGGTTTCTTTTGTGAAGGTGAGTGTCTTCATCTTCCCAAGAGTTTTCAG CTTTTAATAAACTCAAAAGATATGCTTAATTACTCAAAATGGGATGCAGGAAAAAGAATCCTGGGATCTGAAAACTCCAG AGAAGATTGAAGCAGCTGGGAAGAAAAAGGAAGAGGGGAATGCACTGTTCAAGGCTGGTAAATATGAAAGAGCATCAAAG AGATATGAGAAGGTATCACTACAAAAGCCAAAACATCTCAAATTGTTTTGCTACTTAGAACTGTCCTATTGAATTAACAA TGGCTTCTCTGTTTCTCTGGGTGACAGGCTATGAAATTTGTTGAGTATGATACGTCCTTCAGTGACGAGGAGAAACAGCA GTCTAAGACATTGAAGATTACATGCAATCTCAATGATGCAGCCTGCAAGCTGAAACTCAAGGACTACAAACAGGCAGAGA AGTTGTGCACAAAGGTTTTGTTTATGAAATCCCTTACTCTCTTAATCTTTTGTATGAGATTTGGTTGAATTCAAGGGGAA TGAACAATGAAATGAAAATCACTAACCTTTTGAGTGTTTCGTCTTTTGTTTTTCCATACAGGTATTGGAGCTTGATAGTA GGAATGTGAAGGCACTGTACCGGAGGGCACAGGCATATATTCATCTCGTGGACTTGGATCTGGCTGAGATGGATATCAAG AAAGCCCTTGAGATTGAGCCAGATAACAGGTATATTTTTGGTTTCTGTATAATCCATATGCAGTTACATTAACATACTAT GTTCCAAAGGGAGAACTTCAATTTCTTTTGTTTGCATTTCAGGGATGTGAAGATTGAGTACAAAATTTTGAAGGAGAAAG TCAGAGAATACAACAAGAAGGATGCACAGTTCTATGGCAGTATTTTTGCGAAAATGAACAAGGTAGAGCAAGCAAGAACT GCAGGAGCAAAGCAGGAACCAGTGCCAATGGTTGTTGATAGTAAAGCCTAAATTTAGGAGCTACCTGTGTAGTGTTTGTT TCTGCATGCTAGTATATGAGTCCCTGTTTGGTCTTGGTCTCATAACTTTTTTCATGTTAAGAATACTTGTGGTGTTGGTT GTCACTTCCAAGTCATGTACACTGATGGTTAATAAGAAATGAAGTAATCAAGTTTTTGCTACTTTCTCCATTATCACATC TATTACGGCTAATGTTAGTTCTGAATTGTTTGGGAAATGCAATGGAATGAACTATGAGGTGGAAAAATAAGCCCTCTTTG CTATCCACGTTGTTGAAATATTTGTATGCAACTATGGTCTACTTGGACATAAATAAACTATTTC
CDS sequence (LotjaGi4g1v0368800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGATGATTTCGAGTTCCCAGCTGCCGGCAACATGGGAATGGAGGTGGAGGAGGATGAGGTGGTAAGCCCGGTGCT CAAGGTTGGTGAAGAGAAGGAGATTGGTAAGGGCGGGTTGAAGAAGAAGCTTGTTAAAGAAGGTCAAGGTTGGGACAATC CTAACGCTGGTGATCAAGTTGAAGTGCATTATACTGGAACCTTGCTCGATGGTACCAAATTTGATTCTAGCCGTGACAGG GGTACACCTTTCAAATTCAAGCTTGGCCAAGGGCAAGTGATCAAGGGATGGGATGAAGGTATCAAGACCATGAAGAAGGG TGAGAATGCTATTTTCACCATACCCCCAGAATTGGCTTATGGAGAGTCCGGATCTCCACCCACCATTCCACCAAATGCAA CTCTTCAGTTTGATGTGGAGTTGCTGTCTTGGACAAGTGTGAAGGACATTACCAAGGATGGAGGAATCTTGAAGAACATT GTTACTGAAGGGGAGAAATGGGATAATCCTAAGGATTTGGATGAAGTGTTTGTTAAGTATGAAGCTCGGCTTGAAGATGG GACAGTCATTTCTAAATCTGATGGAGTGCAATTCACTGTGGAAAAGGGATTTTTGTGCCCTGCTTTGGCCAAGGCTGTGA AAACAATGAAGAAGGGAGAAAAAGTTCTCTTGAATGTGAAGCCACAATATGCATTTGGTGAGAGTGGAAGGCCAGCATCT GGAAATGAAGGAGGTGTGCCTCCAAATGCTTCGCTCCAAGTAGATCTTGAGTTAGTCTCATGGAAGGCCGTGTCTGACAT TACCAAAGACAGGAAGGTTCTTAAGAAGACTTTGAAGGAAGGAGAGGGATATGAACGACCAAATGATGGAGCTGTAGTTC AAGTGAAACTTGTTGGCAAGCTGCAAGATGGGACTGTTTTCCTTAAGAGGGGCTATGATGATGAACAGCCATTTGAGTTC AAAATTGATGAAGAGCAAGTAATTGATGGACTTGATAGAGCTGTGAAGAACATGAAGAAAGGTGAAATTGCATTGGTGAT CATTCAGCCTGAGTATGCTTTTGGTCCATCTGGGTCATCTCAGGAATTGGCTGCTGTTCCTCCCAATTCCACTGTGTATT ATGAAGTTGAGCTGGTTTCTTTTGTGAAGGAAAAAGAATCCTGGGATCTGAAAACTCCAGAGAAGATTGAAGCAGCTGGG AAGAAAAAGGAAGAGGGGAATGCACTGTTCAAGGCTGGTAAATATGAAAGAGCATCAAAGAGATATGAGAAGGCTATGAA ATTTGTTGAGTATGATACGTCCTTCAGTGACGAGGAGAAACAGCAGTCTAAGACATTGAAGATTACATGCAATCTCAATG ATGCAGCCTGCAAGCTGAAACTCAAGGACTACAAACAGGCAGAGAAGTTGTGCACAAAGGTATTGGAGCTTGATAGTAGG AATGTGAAGGCACTGTACCGGAGGGCACAGGCATATATTCATCTCGTGGACTTGGATCTGGCTGAGATGGATATCAAGAA AGCCCTTGAGATTGAGCCAGATAACAGGGATGTGAAGATTGAGTACAAAATTTTGAAGGAGAAAGTCAGAGAATACAACA AGAAGGATGCACAGTTCTATGGCAGTATTTTTGCGAAAATGAACAAGGTAGAGCAAGCAAGAACTGCAGGAGCAAAGCAG GAACCAGTGCCAATGGTTGTTGATAGTAAAGCCTAA
Protein sequence (LotjaGi4g1v0368800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDDDFEFPAAGNMGMEVEEDEVVSPVLKVGEEKEIGKGGLKKKLVKEGQGWDNPNAGDQVEVHYTGTLLDGTKFDSSRDR GTPFKFKLGQGQVIKGWDEGIKTMKKGENAIFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTSVKDITKDGGILKNI VTEGEKWDNPKDLDEVFVKYEARLEDGTVISKSDGVQFTVEKGFLCPALAKAVKTMKKGEKVLLNVKPQYAFGESGRPAS GNEGGVPPNASLQVDLELVSWKAVSDITKDRKVLKKTLKEGEGYERPNDGAVVQVKLVGKLQDGTVFLKRGYDDEQPFEF KIDEEQVIDGLDRAVKNMKKGEIALVIIQPEYAFGPSGSSQELAAVPPNSTVYYEVELVSFVKEKESWDLKTPEKIEAAG KKKEEGNALFKAGKYERASKRYEKAMKFVEYDTSFSDEEKQQSKTLKITCNLNDAACKLKLKDYKQAEKLCTKVLELDSR NVKALYRRAQAYIHLVDLDLAEMDIKKALEIEPDNRDVKIEYKILKEKVREYNKKDAQFYGSIFAKMNKVEQARTAGAKQ EPVPMVVDSKA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 10 | 558 | 549 | 1.0E-302 | – | |
| PANTHER | 10 | 558 | 549 | 1.0E-302 | – | |
| SUPERFAMILY | 17 | 149 | 133 | 3.34E-46 | – | |
| Gene3D | 30 | 145 | 116 | 1.6E-54 | – | |
| Pfam | 53 | 142 | 90 | 4.8E-36 | ||
| ProSiteProfiles | 57 | 145 | 89 | 33.628 | ||
| Gene3D | 146 | 261 | 116 | 1.9E-35 | – | |
| SUPERFAMILY | 147 | 265 | 119 | 2.06E-24 | – | |
| Pfam | 170 | 259 | 90 | 9.9E-16 | ||
| ProSiteProfiles | 173 | 262 | 90 | 19.341 | ||
| Gene3D | 262 | 390 | 129 | 6.2E-39 | – | |
| SUPERFAMILY | 265 | 399 | 135 | 5.5E-34 | – | |
| Pfam | 284 | 379 | 96 | 1.6E-24 | ||
| ProSiteProfiles | 290 | 382 | 93 | 23.496 | ||
| Gene3D | 392 | 556 | 165 | 3.4E-53 | ||
| SUPERFAMILY | 395 | 547 | 153 | 9.62E-31 | ||
| SMART | 399 | 432 | 34 | 15.0 | ||
| ProSiteProfiles | 399 | 432 | 34 | 7.913 | ||
| ProSiteProfiles | 399 | 432 | 34 | 7.729 | ||
| ProSiteProfiles | 448 | 481 | 34 | 5.576 | ||
| ProSiteProfiles | 448 | 515 | 68 | 14.347 | ||
| SMART | 448 | 481 | 34 | 0.037 | ||
| ProSiteProfiles | 482 | 515 | 34 | 9.617 | ||
| SMART | 482 | 515 | 34 | 5.6E-5 | ||
| Pfam | 483 | 515 | 33 | 9.1E-4 | ||
| Coils | 515 | 535 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peptidyl-prolyl cis-trans isomerase activity | Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0). | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0368800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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