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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0374400 |
| Transcript ID | LotjaGi4g1v0374400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | F-box/kelch-repeat protein; TAIR: AT1G55270.1 Galactose oxidase/kelch repeat superfamily protein; Swiss-Prot: sp|Q93W93|FBK22_ARATH F-box/kelch-repeat protein At1g55270; TrEMBL-Plants: tr|I3SJ08|I3SJ08_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0374400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:75363200..75367611) extracted from Lotus japonicus Gifu genome v1.2.
AAAGAAGGACCATCGTCACAACTCACAATTTATTACTATAAATAATTTCATCAATTTATTTATTGCACTCAATTTAACAT TAATTAAATTAAAAAAAAAAACTCATTAGATTTCTCAAATCCCCAATTTCTGTGCTCTCTTTCTTCACTGCAAGTGAAAA AGGTGCTCCTCACGATTCATAGTTCTCTGAATCTTTCAAACGTGAATGACCCTTTTCATTTTTTGCCATTCTCTTGCAGT TTCTGTGGTCAAAATCGTGTCTTTTTCTCTTTTGCTGCTAACTGGATCGGGTTCCTAGGGTAGGCTTAAAAGGGGTTTGT GTTGATCTGTTCCAAGATGGGGAATTTGCTTTGAAAAATCGATTTTGTCAACGAGAGAAAGCTTGGAGATGAACCAGTTA GTTGAAAGCTCTGCGAATGGTCAAAGGGTCACTAGAGTTCAAGCTCCACTGGTTAGTCCAGTTGACTTCATTTTGTTTTG GTTATCATGATATTGGTTGTGTTTTTCTCAAATCGAATTTGTGTTGTTTTTGCTTTTCATTTTCATGGCATTTGAGATAT ATGCAGATATTTTCTTGTTCCATTTCTAGAAACACCTTTTTGTTTGTGTGTTTGTTTGTTAAGGTTCAAATTTGGTTGCT CTGTGTTTGAGGTTTTGGCAAACCTGGATTCCTACATTCTATTTGTGTTTGGAACAGAAGCTAAGAACTAAGTTGTGATT TCAGCTAATTGGGTAGTCTATAAATCATAGACTTCTTAAATTGGAAGAATCTCTCTGTGAGGGGCTCTTTTGACTAAATC AAAGTTTGATATTATAGGTCCCTTGTTGCTTCAGCATGCATTATCTATTGGCTTCTTAAATCCTAATCCTACCTAAACTT GTGTTATGATATATGGTAGTATTTTCTTAAAATAATCAAACTACTATATCATATCTGAGCTTTGTTTTACCTGGTAAATA GTTGTAATGGTAATGTTTGAATTTCCTAGTGTTGACATCTTTTTGGTATGTCAAGAGCTAAACCTGTGGTCTCTATTCAA GTCCCACTGCCACAGTCATCTGAGCTTTGATATTGTATATGAATCAATCATTAATCGCATTTTATACGCTATTGAATCTT GGAATGTGAAGTAGGATCCATTTGTGCATATGCTTCTATCCTTATCTTTGAACTTAATTTAGTTGACCTGTTACATCTTG TCATAGAATCATCGTCTGCTCTCTTGTGAATGCATGGTAAGGCTTTCTACAGTAGACCCACAATGAATCTAGCCCTTCCC TTGAGAGATTTAATAACTGGTTTCCCTTTTTTATGGTTGCGTCTTGTGGTTGGTATGGGTGTTTTAGATGACATTGTTTT CTGGACTTAGAGTTATATTGTTTGTAATGAAACTTCCAGCGCATAGAATGTTTATCAATAACATTAAGGAATGACAGGAA TTGTCACAGGACAAACATTGCTTGATTTTTTATGTCCCATGGTAGATCCCTAGAATGTCAATGTGCCCACAAGGATGTAA TTTGGGTTTTTTAAGTGCTCTATCTAAGGAAGATCATAAAGCATGTTGTGGATAGGGAGGATTAGGTTGAAAACTGTATG TGTCTTCATTTTCTTTGTTATGTCTCAGCACTTCATAATAAGGACCCTGTATTGTGACTTTTTGAATTGGGTTCATGAAA ACACTTACAAGTCAGAAGACTATGTCTGTCACATAAGCCATCATCAATATCACTTACCAGTGTACATTTTATTTCCTAAG ATGTCAAGATTTGTAAGAATGGAATAGGTGCATAATGTACCCTGCCTTGTCTTCACCATCGTAATACCTTCAAAACTCTA CTGAGGGGTATGCTGTTGTGTAACTAGGTTCTATCTATGATTGAAGCATTTTAGGAAACATCATTGTTGACCTCTACATC TTTCAATCTGAATCTCATTAGGTGTCTACCTTCTTTGGAGCTTTTCATTACTAATGCAAAATATGTTTTCCTCCCTTGCA CTTGTCTTTAGTCAGATATTCTCCTGACTCGGACTTATCATTCTTCACTCTGAATTTGAACTGTCATCATGTCGATGGTG ATGGGGTTCTATATGGTCACTTATGATTATCTATTTGTATTTTTGATGTTACAACTTACTATGTTCCGATTTTATTAACT CAAGATGTTGGCCTTCTTCACAAATCGGAGTTTGTGAAGGAAATTTCTGGTGCATGTATGTGTCAGAAGCTCTTTTATTT TTATTTAAATATGTAACTATGAAACTAGTGTTGCCTTGGATGGTCTGGTGATCTCATGATGCATGTGATGAAACGATCAT TCTCATTGCCCCATCTGCAGCATTGGAAATAACTCATCATGTTCATATATGATAATTTATAACTGAAAATTTACTATCTA AAGAAAATTCAGTTTTATAAAATAATTTATCCTCTGATAAGTCATTATTTTGTGAAGTTATTTGTCTGGAACATCAACTT TTTATTGCATAAAAAATATCAATTATTATTTTTTAATTCATTGGTATCCGAAACTAGAAAGGATATAATATATAGAGTGA GCTGTGTGCATGTGATATGCTCTTGGACATTATGCACATGCATTTCTTAGTGATTTTTTTTGGTACTTCCAATGTACTAA CATGGAAAGTTTCATAGGTGGACTCTGTTTCATGCTACTGTAAAGTAGATTCAGGCCTGAAAACAGTTGCTGGGGCAAGG AAATTTGTTCCAGGATCAAAGATATGTATCCAACCTGACATAAACCCGAATGCACATAGGAACAAAAACTTGCGTAGAGA GAAGACAAAAGTTCAGCCTCCTCTGTTACCTGGTCTTCCTGATGATCTTGCTATTGCTTGTTTGATTCGTGTACCCAGGG TTGAGCACAGGAAACTGCGTTTGGTTTGCAAGAGATGGTACCGCCTCCTGTCTGGAAATTTCTTCTATTCGCTCAGGAAA AGTCTTGGAATGGCAGAAGAATGGGTTTATGTCATCAAAAGAGACCGTGAGGGAAGAATTTCATTGCATGCTTTTGATCC CATTTACCAACTATGGCAATCCCTTCCGCCTGTTCCTGGGGAATATTCTGAAGCATTGGGATTTGGCTGTGCCGTTCTTA GTGGTTGTCACTTGTACTTGTTTGGCGGAAGAGATCCACTGAAGGGGTCTATGAGACGAGTCATTTTCTACAATGCCCGT ACAAATAAATGGCACAGAGCACCAGATATGCTGCGGAAACGACATCTGTTTGGCTCTTGTGTTATAAATAACTGTCTCTA TGTTGCTGGTGGGGAATGTAAAGGAATTCAAAGAACTCTTCGATCTGCTGAAATTTATGACCCCAACCGGAACAGGTGGA GCTTTATCTCAGAGATGAGCACTGCCATGGTTCCTTTTATTGGTGTTGTTCATAATGAAACATGGTTTTTGAAGGGACTT GGGACGAATCGCAATGTCATCTGTGAATCCTATGCACATGAAACTGATACCTGGACCCCTGTAAGCAATGGAATGGTCAA TGGATGGCGTAATCCAAGTATCTCGCTGAACGGACAGCTCTACGCCCTCGATTGCCAGGATGGTTGCAAGCTCAAAGTAT ATGATGGAGCAACAGATTCATGGAAAAGGTTTATTGATAGCAAGCTTCATTTAGGTAGTTCTCGGGCTCTCGATGCTGCT GCTCTTGTTCCCCTTAATGGAAAGCTATGCATTATCCGCAACAATATGAGCATCAGTCTAGTTGATGTCTCGAGTCCGAA CAAACGCGTGGAAAGCAATCCTCACCTTTGGGAAAATATTGCTGGAAAAGGACCTGTCAGGTCTCTGGTTAGAAATTTAT GGTCAACTATAGCAGGGAGAGGTGGTTTGAAGAGTCACATTGTTCACTGTCAGGTTCTTCAAGCCTGATATCAAAAAGAA GTTCTCTGATAATCTTGGTTATACAGTTAGGGAAGTTGTTGGATTTTTTGGGGAATCAGTTGAAACAGGTTTATAAAGAT GAAGTTTATTGTTGATTTTGGCAATAGAATGAGGTCATTCCTTCACAATTATGAATAGGGAACAAATATTGTAAATGTTG GTTATCTCTAGAGCTGTGCCTTTTCCTTCAGTTACAATATGTTAGGAATTAGGATTTTATGTCATGCATTGCGGTTGTAT ATGATTTATTAGACAACAACATGTTACTGTTGGCATCTCTGGTGAAGTTGATTTATTTCTGTTAGCAGAGAAGAGCATAT CAGATCCCATGTTGTGGCAAAAGCTGTTTCAGTGCATGGTTTGAAAGTGTGTTGATTGTTTTTGAAGACTATGAACTTTG AATTACTGAAGATTTTTCCATAAATCTAAAAGTTATATTAATCACTATTGTATTGTTTCTCAATCTAAGTAAAGAATTAA ACTTTTATTTGG
CDS sequence (LotjaGi4g1v0374400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACCAGTTAGTTGAAAGCTCTGCGAATGGTCAAAGGGTCACTAGAGTTCAAGCTCCACTGGTGGACTCTGTTTCATG CTACTGTAAAGTAGATTCAGGCCTGAAAACAGTTGCTGGGGCAAGGAAATTTGTTCCAGGATCAAAGATATGTATCCAAC CTGACATAAACCCGAATGCACATAGGAACAAAAACTTGCGTAGAGAGAAGACAAAAGTTCAGCCTCCTCTGTTACCTGGT CTTCCTGATGATCTTGCTATTGCTTGTTTGATTCGTGTACCCAGGGTTGAGCACAGGAAACTGCGTTTGGTTTGCAAGAG ATGGTACCGCCTCCTGTCTGGAAATTTCTTCTATTCGCTCAGGAAAAGTCTTGGAATGGCAGAAGAATGGGTTTATGTCA TCAAAAGAGACCGTGAGGGAAGAATTTCATTGCATGCTTTTGATCCCATTTACCAACTATGGCAATCCCTTCCGCCTGTT CCTGGGGAATATTCTGAAGCATTGGGATTTGGCTGTGCCGTTCTTAGTGGTTGTCACTTGTACTTGTTTGGCGGAAGAGA TCCACTGAAGGGGTCTATGAGACGAGTCATTTTCTACAATGCCCGTACAAATAAATGGCACAGAGCACCAGATATGCTGC GGAAACGACATCTGTTTGGCTCTTGTGTTATAAATAACTGTCTCTATGTTGCTGGTGGGGAATGTAAAGGAATTCAAAGA ACTCTTCGATCTGCTGAAATTTATGACCCCAACCGGAACAGGTGGAGCTTTATCTCAGAGATGAGCACTGCCATGGTTCC TTTTATTGGTGTTGTTCATAATGAAACATGGTTTTTGAAGGGACTTGGGACGAATCGCAATGTCATCTGTGAATCCTATG CACATGAAACTGATACCTGGACCCCTGTAAGCAATGGAATGGTCAATGGATGGCGTAATCCAAGTATCTCGCTGAACGGA CAGCTCTACGCCCTCGATTGCCAGGATGGTTGCAAGCTCAAAGTATATGATGGAGCAACAGATTCATGGAAAAGGTTTAT TGATAGCAAGCTTCATTTAGGTAGTTCTCGGGCTCTCGATGCTGCTGCTCTTGTTCCCCTTAATGGAAAGCTATGCATTA TCCGCAACAATATGAGCATCAGTCTAGTTGATGTCTCGAGTCCGAACAAACGCGTGGAAAGCAATCCTCACCTTTGGGAA AATATTGCTGGAAAAGGACCTGTCAGGTCTCTGGTTAGAAATTTATGGTCAACTATAGCAGGGAGAGGTGGTTTGAAGAG TCACATTGTTCACTGTCAGGTTCTTCAAGCCTGA
Protein sequence (LotjaGi4g1v0374400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNQLVESSANGQRVTRVQAPLVDSVSCYCKVDSGLKTVAGARKFVPGSKICIQPDINPNAHRNKNLRREKTKVQPPLLPG LPDDLAIACLIRVPRVEHRKLRLVCKRWYRLLSGNFFYSLRKSLGMAEEWVYVIKRDREGRISLHAFDPIYQLWQSLPPV PGEYSEALGFGCAVLSGCHLYLFGGRDPLKGSMRRVIFYNARTNKWHRAPDMLRKRHLFGSCVINNCLYVAGGECKGIQR TLRSAEIYDPNRNRWSFISEMSTAMVPFIGVVHNETWFLKGLGTNRNVICESYAHETDTWTPVSNGMVNGWRNPSISLNG QLYALDCQDGCKLKVYDGATDSWKRFIDSKLHLGSSRALDAAALVPLNGKLCIIRNNMSISLVDVSSPNKRVESNPHLWE NIAGKGPVRSLVRNLWSTIAGRGGLKSHIVHCQVLQA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 437 | 437 | 9.3E-266 | – | |
| PANTHER | 1 | 437 | 437 | 9.3E-266 | – | |
| SUPERFAMILY | 73 | 136 | 64 | 1.1E-8 | ||
| Pfam | 78 | 115 | 38 | 7.4E-6 | ||
| Gene3D | 126 | 397 | 272 | 3.1E-37 | ||
| SUPERFAMILY | 136 | 377 | 242 | 7.98E-44 | ||
| Pfam | 169 | 214 | 46 | 3.2E-6 | – | |
| SMART | 179 | 226 | 48 | 2.9E-8 | ||
| Pfam | 216 | 262 | 47 | 1.2E-11 | ||
| SMART | 227 | 275 | 49 | 6.6E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0374400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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